data_KS7
# 
_chem_comp.id                                    KS7 
_chem_comp.name                                  "4-[3-(3,5-dimethoxyphenyl)-1,2,4-oxadiazol-5-yl]-1-methyl-9-(2-methylpyridin-4-yl)-1,4,9-triazaspiro[5.5]undecane" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H32 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-01-11 
_chem_comp.pdbx_modified_date                    2019-02-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        464.560 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KS7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6NM4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KS7 C4  C1  C 0 1 N N N 0.686   -30.259 18.844 9.451  0.883  -1.311 C4  KS7 1  
KS7 C5  C2  C 0 1 Y N N 0.210   -31.903 22.035 5.822  0.909  -0.818 C5  KS7 2  
KS7 C6  C3  C 0 1 Y N N 0.474   -31.805 23.401 4.859  0.086  -0.240 C6  KS7 3  
KS7 N1  N1  N 0 1 N N N -1.479  -35.829 25.065 0.028  0.203  0.353  N1  KS7 4  
KS7 C7  C4  C 0 1 Y N N 0.013   -32.874 24.326 3.430  0.485  -0.261 C7  KS7 5  
KS7 C8  C5  C 0 1 Y N N -0.848  -34.667 24.976 1.322  0.512  0.009  C8  KS7 6  
KS7 N2  N2  N 0 1 N N N -5.980  -34.594 22.747 -5.020 0.269  -0.639 N2  KS7 7  
KS7 C9  C6  C 0 1 N N N -2.220  -36.288 23.891 -0.900 1.256  -0.084 C9  KS7 8  
KS7 C10 C7  C 0 1 N N N -3.763  -36.084 24.087 -2.333 0.839  0.248  C10 KS7 9  
KS7 C11 C8  C 0 1 N N N -4.083  -34.607 24.366 -3.300 1.949  -0.171 C11 KS7 10 
KS7 C12 C9  C 0 1 N N N -5.490  -34.120 24.048 -4.736 1.500  0.109  C12 KS7 11 
KS7 N3  N3  N 0 1 Y N N -9.743  -33.103 21.566 -8.985 -0.811 -0.261 N3  KS7 12 
KS7 C13 C10 C 0 1 Y N N -7.238  -34.096 22.347 -6.357 -0.095 -0.512 C13 KS7 13 
KS7 C14 C11 C 0 1 Y N N -7.889  -33.095 23.077 -6.851 -1.237 -1.142 C14 KS7 14 
KS7 C15 C12 C 0 1 Y N N -9.130  -32.624 22.669 -8.182 -1.563 -0.990 C15 KS7 15 
KS7 N4  N4  N 0 1 N N N -4.123  -37.065 25.184 -2.452 0.604  1.693  N4  KS7 16 
KS7 C21 C13 C 0 1 N N N -5.373  -36.876 25.934 -2.234 1.844  2.448  C21 KS7 17 
KS7 C20 C14 C 0 1 N N N -4.392  -36.486 22.745 -2.681 -0.445 -0.509 C20 KS7 18 
KS7 C19 C15 C 0 1 N N N -5.842  -36.048 22.626 -4.135 -0.825 -0.219 C19 KS7 19 
KS7 C18 C16 C 0 1 Y N N -7.885  -34.579 21.210 -7.239 0.673  0.249  C18 KS7 20 
KS7 C17 C17 C 0 1 Y N N -9.117  -34.058 20.867 -8.556 0.278  0.351  C17 KS7 21 
KS7 C16 C18 C 0 1 N N N -9.849  -31.559 23.439 -8.728 -2.795 -1.666 C16 KS7 22 
KS7 C22 C19 C 0 1 N N N -3.008  -37.486 26.056 -1.525 -0.449 2.130  C22 KS7 23 
KS7 C23 C20 C 0 1 N N N -2.035  -36.334 26.325 -0.090 -0.031 1.799  C23 KS7 24 
KS7 O2  O1  O 0 1 Y N N -0.280  -34.106 26.056 1.735  1.610  -0.641 O2  KS7 25 
KS7 N   N5  N 0 1 Y N N 0.297   -32.884 25.600 2.938  1.577  -0.787 N   KS7 26 
KS7 N5  N6  N 0 1 Y N N -0.705  -33.957 23.891 2.396  -0.214 0.254  N5  KS7 27 
KS7 C3  C21 C 0 1 Y N N 0.718   -30.948 21.163 7.155  0.531  -0.801 C3  KS7 28 
KS7 O1  O2  O 0 1 N N N 0.307   -31.180 19.870 8.096  1.334  -1.365 O1  KS7 29 
KS7 C2  C22 C 0 1 Y N N 1.496   -29.897 21.631 7.531  -0.666 -0.209 C2  KS7 30 
KS7 C24 C23 C 0 1 Y N N 1.225   -30.736 23.885 5.240  -1.113 0.359  C24 KS7 31 
KS7 C1  C24 C 0 1 Y N N 1.726   -29.794 22.998 6.574  -1.488 0.368  C1  KS7 32 
KS7 O   O3  O 0 1 N N N 2.394   -28.798 23.660 6.946  -2.660 0.947  O   KS7 33 
KS7 C   C25 C 0 1 N N N 2.927   -27.712 22.902 8.338  -2.981 0.925  C   KS7 34 
KS7 H1  H1  H 0 1 N N N 0.276   -30.594 17.880 9.753  0.764  -0.271 H1  KS7 35 
KS7 H2  H2  H 0 1 N N N 0.291   -29.261 19.083 9.536  -0.074 -1.826 H2  KS7 36 
KS7 H3  H3  H 0 1 N N N 1.783   -30.213 18.780 10.097 1.615  -1.796 H3  KS7 37 
KS7 H4  H4  H 0 1 N N N -0.388  -32.719 21.656 5.530  1.839  -1.283 H4  KS7 38 
KS7 H5  H5  H 0 1 N N N -2.016  -37.357 23.732 -0.663 2.187  0.431  H5  KS7 39 
KS7 H6  H6  H 0 1 N N N -1.890  -35.716 23.011 -0.803 1.401  -1.160 H6  KS7 40 
KS7 H7  H7  H 0 1 N N N -3.383  -34.000 23.773 -3.084 2.853  0.398  H7  KS7 41 
KS7 H8  H8  H 0 1 N N N -3.907  -34.428 25.437 -3.182 2.152  -1.235 H8  KS7 42 
KS7 H9  H9  H 0 1 N N N -5.487  -33.020 24.042 -5.429 2.282  -0.203 H9  KS7 43 
KS7 H10 H10 H 0 1 N N N -6.172  -34.481 24.832 -4.857 1.313  1.176  H10 KS7 44 
KS7 H11 H11 H 0 1 N N N -7.424  -32.687 23.962 -6.200 -1.857 -1.740 H11 KS7 45 
KS7 H13 H13 H 0 1 N N N -5.474  -37.673 26.686 -2.976 2.585  2.153  H13 KS7 46 
KS7 H14 H14 H 0 1 N N N -5.354  -35.898 26.437 -2.328 1.642  3.515  H14 KS7 47 
KS7 H15 H15 H 0 1 N N N -6.226  -36.916 25.241 -1.235 2.227  2.238  H15 KS7 48 
KS7 H16 H16 H 0 1 N N N -4.345  -37.581 22.648 -2.553 -0.283 -1.579 H16 KS7 49 
KS7 H17 H17 H 0 1 N N N -3.815  -36.021 21.932 -2.022 -1.250 -0.182 H17 KS7 50 
KS7 H18 H18 H 0 1 N N N -6.230  -36.363 21.646 -4.258 -1.002 0.849  H18 KS7 51 
KS7 H19 H19 H 0 1 N N N -6.427  -36.529 23.424 -4.390 -1.730 -0.769 H19 KS7 52 
KS7 H20 H20 H 0 1 N N N -7.429  -35.350 20.606 -6.894 1.564  0.752  H20 KS7 53 
KS7 H21 H21 H 0 1 N N N -9.604  -34.443 19.983 -9.245 0.866  0.938  H21 KS7 54 
KS7 H22 H22 H 0 1 N N N -10.808 -31.335 22.948 -9.091 -2.534 -2.660 H22 KS7 55 
KS7 H23 H23 H 0 1 N N N -10.035 -31.911 24.464 -7.939 -3.542 -1.752 H23 KS7 56 
KS7 H24 H24 H 0 1 N N N -9.232  -30.649 23.470 -9.549 -3.200 -1.074 H24 KS7 57 
KS7 H25 H25 H 0 1 N N N -3.418  -37.838 27.014 -1.622 -0.596 3.206  H25 KS7 58 
KS7 H26 H26 H 0 1 N N N -2.463  -38.307 25.567 -1.761 -1.380 1.613  H26 KS7 59 
KS7 H27 H27 H 0 1 N N N -1.215  -36.694 26.964 0.597  -0.823 2.096  H27 KS7 60 
KS7 H28 H28 H 0 1 N N N -2.569  -35.520 26.837 0.155  0.885  2.337  H28 KS7 61 
KS7 H29 H29 H 0 1 N N N 1.914   -29.174 20.946 8.571  -0.958 -0.197 H29 KS7 62 
KS7 H30 H30 H 0 1 N N N 1.416   -30.641 24.944 4.496  -1.753 0.808  H30 KS7 63 
KS7 H31 H31 H 0 1 N N N 3.429   -27.004 23.578 8.680  -3.043 -0.108 H31 KS7 64 
KS7 H32 H32 H 0 1 N N N 3.652   -28.097 22.170 8.898  -2.206 1.448  H32 KS7 65 
KS7 H33 H33 H 0 1 N N N 2.110   -27.198 22.374 8.497  -3.940 1.419  H33 KS7 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KS7 C4  O1  SING N N 1  
KS7 O1  C3  SING N N 2  
KS7 C17 C18 DOUB Y N 3  
KS7 C17 N3  SING Y N 4  
KS7 C3  C2  DOUB Y N 5  
KS7 C3  C5  SING Y N 6  
KS7 C18 C13 SING Y N 7  
KS7 N3  C15 DOUB Y N 8  
KS7 C2  C1  SING Y N 9  
KS7 C5  C6  DOUB Y N 10 
KS7 C13 N2  SING N N 11 
KS7 C13 C14 DOUB Y N 12 
KS7 C19 C20 SING N N 13 
KS7 C19 N2  SING N N 14 
KS7 C15 C14 SING Y N 15 
KS7 C15 C16 SING N N 16 
KS7 C20 C10 SING N N 17 
KS7 N2  C12 SING N N 18 
KS7 C   O   SING N N 19 
KS7 C1  O   SING N N 20 
KS7 C1  C24 DOUB Y N 21 
KS7 C6  C24 SING Y N 22 
KS7 C6  C7  SING N N 23 
KS7 C9  C10 SING N N 24 
KS7 C9  N1  SING N N 25 
KS7 N5  C7  SING Y N 26 
KS7 N5  C8  DOUB Y N 27 
KS7 C12 C11 SING N N 28 
KS7 C10 C11 SING N N 29 
KS7 C10 N4  SING N N 30 
KS7 C7  N   DOUB Y N 31 
KS7 C8  N1  SING N N 32 
KS7 C8  O2  SING Y N 33 
KS7 N1  C23 SING N N 34 
KS7 N4  C21 SING N N 35 
KS7 N4  C22 SING N N 36 
KS7 N   O2  SING Y N 37 
KS7 C22 C23 SING N N 38 
KS7 C4  H1  SING N N 39 
KS7 C4  H2  SING N N 40 
KS7 C4  H3  SING N N 41 
KS7 C5  H4  SING N N 42 
KS7 C9  H5  SING N N 43 
KS7 C9  H6  SING N N 44 
KS7 C11 H7  SING N N 45 
KS7 C11 H8  SING N N 46 
KS7 C12 H9  SING N N 47 
KS7 C12 H10 SING N N 48 
KS7 C14 H11 SING N N 49 
KS7 C21 H13 SING N N 50 
KS7 C21 H14 SING N N 51 
KS7 C21 H15 SING N N 52 
KS7 C20 H16 SING N N 53 
KS7 C20 H17 SING N N 54 
KS7 C19 H18 SING N N 55 
KS7 C19 H19 SING N N 56 
KS7 C18 H20 SING N N 57 
KS7 C17 H21 SING N N 58 
KS7 C16 H22 SING N N 59 
KS7 C16 H23 SING N N 60 
KS7 C16 H24 SING N N 61 
KS7 C22 H25 SING N N 62 
KS7 C22 H26 SING N N 63 
KS7 C23 H27 SING N N 64 
KS7 C23 H28 SING N N 65 
KS7 C2  H29 SING N N 66 
KS7 C24 H30 SING N N 67 
KS7 C   H31 SING N N 68 
KS7 C   H32 SING N N 69 
KS7 C   H33 SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KS7 SMILES           ACDLabs              12.01 "COc1cc(cc(c1)OC)c5noc(N2CCN(C4(C2)CCN(c3cc(ncc3)C)CC4)C)n5"                                                                                                       
KS7 InChI            InChI                1.03  "InChI=1S/C25H32N6O3/c1-18-13-20(5-8-26-18)30-9-6-25(7-10-30)17-31(12-11-29(25)2)24-27-23(28-34-24)19-14-21(32-3)16-22(15-19)33-4/h5,8,13-16H,6-7,9-12,17H2,1-4H3" 
KS7 InChIKey         InChI                1.03  NZYTZRHHBAJPKN-UHFFFAOYSA-N                                                                                                                                        
KS7 SMILES_CANONICAL CACTVS               3.385 "COc1cc(OC)cc(c1)c2noc(n2)N3CCN(C)C4(CCN(CC4)c5ccnc(C)c5)C3"                                                                                                       
KS7 SMILES           CACTVS               3.385 "COc1cc(OC)cc(c1)c2noc(n2)N3CCN(C)C4(CCN(CC4)c5ccnc(C)c5)C3"                                                                                                       
KS7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(ccn1)N2CCC3(CC2)CN(CCN3C)c4nc(no4)c5cc(cc(c5)OC)OC"                                                                                                         
KS7 SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc(ccn1)N2CCC3(CC2)CN(CCN3C)c4nc(no4)c5cc(cc(c5)OC)OC"                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KS7 "SYSTEMATIC NAME" ACDLabs              12.01 "4-[3-(3,5-dimethoxyphenyl)-1,2,4-oxadiazol-5-yl]-1-methyl-9-(2-methylpyridin-4-yl)-1,4,9-triazaspiro[5.5]undecane" 
KS7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-(3,5-dimethoxyphenyl)-5-[1-methyl-9-(2-methylpyridin-4-yl)-1,4,9-triazaspiro[5.5]undecan-4-yl]-1,2,4-oxadiazole" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KS7 "Create component" 2019-01-11 RCSB 
KS7 "Initial release"  2019-02-13 RCSB 
# 
