data_JT7
# 
_chem_comp.id                                    JT7 
_chem_comp.name                                  "N-[(1R)-1-borono-3-methylbutyl]-N~2~-(2-chloro-4-methoxybenzene-1-carbonyl)-L-leucinamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H30 B Cl N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-11-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        412.716 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JT7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6BHM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JT7 CL01 CL1 CL 0 0 N N N N N N -38.065 56.676 -39.003 4.308  -1.429 -1.568 CL01 JT7 1  
JT7 O02  O1  O  0 1 N N N N N N -40.622 56.491 -47.560 -5.687 1.242  2.007  O02  JT7 2  
JT7 O03  O2  O  0 1 N N N N N N -40.668 53.687 -46.565 -4.939 -1.096 1.852  O03  JT7 3  
JT7 C04  C1  C  0 1 N N R N N N -42.047 55.892 -45.426 -4.224 0.550  -0.016 C04  JT7 4  
JT7 C05  C2  C  0 1 N N N N N N -43.061 57.041 -45.527 -5.170 0.326  -1.198 C05  JT7 5  
JT7 C06  C3  C  0 1 N N N N N N -44.416 56.593 -46.191 -6.388 1.241  -1.058 C06  JT7 6  
JT7 C07  C4  C  0 1 N N N N N N -45.294 55.875 -45.225 -5.944 2.701  -1.166 C07  JT7 7  
JT7 C08  C5  C  0 1 N N N N N N -45.208 57.785 -46.707 -7.391 0.929  -2.170 C08  JT7 8  
JT7 N09  N1  N  0 1 N N N N N N -40.885 56.306 -44.736 -3.058 -0.326 -0.151 N09  JT7 9  
JT7 C10  C6  C  0 1 N N N N N N -40.742 56.131 -43.369 -1.820 0.162  0.064  C10  JT7 10 
JT7 O11  O3  O  0 1 N N N N N N -41.670 55.648 -42.744 -1.672 1.327  0.369  O11  JT7 11 
JT7 C12  C7  C  0 1 N N S N N N -39.402 56.561 -42.689 -0.620 -0.739 -0.075 C12  JT7 12 
JT7 C13  C8  C  0 1 N N N N N N -38.524 55.355 -42.736 -0.737 -1.900 0.915  C13  JT7 13 
JT7 C14  C9  C  0 1 N N N N N N -37.094 55.748 -42.261 0.415  -2.881 0.690  C14  JT7 14 
JT7 C15  C10 C  0 1 N N N N N N -36.304 54.430 -42.171 0.370  -3.975 1.758  C15  JT7 15 
JT7 C16  C11 C  0 1 N N N N N N -36.319 56.554 -43.321 0.281  -3.515 -0.696 C16  JT7 16 
JT7 N17  N2  N  0 1 N N N N N N -39.709 56.906 -41.344 0.598  0.023  0.209  N17  JT7 17 
JT7 C18  C12 C  0 1 N N N N N N -39.694 58.222 -40.810 1.776  -0.371 -0.314 C18  JT7 18 
JT7 O19  O4  O  0 1 N N N N N N -39.356 59.151 -41.471 1.828  -1.360 -1.020 O19  JT7 19 
JT7 C20  C13 C  0 1 Y N N N N N -40.149 58.400 -39.361 3.004  0.396  -0.029 C20  JT7 20 
JT7 C21  C14 C  0 1 Y N N N N N -41.253 59.197 -38.994 2.947  1.533  0.783  C21  JT7 21 
JT7 C22  C15 C  0 1 Y N N N N N -41.604 59.299 -37.636 4.094  2.246  1.047  C22  JT7 22 
JT7 C23  C16 C  0 1 Y N N N N N -40.903 58.533 -36.671 5.309  1.839  0.507  C23  JT7 23 
JT7 C24  C17 C  0 1 Y N N N N N -39.834 57.754 -37.101 5.371  0.710  -0.301 C24  JT7 24 
JT7 C25  C18 C  0 1 Y N N N N N -39.456 57.672 -38.447 4.229  -0.014 -0.565 C25  JT7 25 
JT7 O26  O5  O  0 1 N N N N N N -41.205 58.586 -35.267 6.437  2.546  0.770  O26  JT7 26 
JT7 C27  C19 C  0 1 N N N N N N -40.750 57.642 -34.285 7.651  2.072  0.183  C27  JT7 27 
JT7 B28  B1  B  0 1 N N N N N N -41.285 55.230 -46.757 -4.974 0.221  1.323  B28  JT7 28 
JT7 H1   H1  H  0 1 N N N N N N -41.199 57.243 -47.501 -5.654 2.104  1.571  H1   JT7 29 
JT7 H2   H2  H  0 1 N N N N N N -41.273 53.166 -46.050 -4.429 -1.721 1.317  H2   JT7 30 
JT7 H3   H3  H  0 1 N N N N N N -42.524 55.059 -44.888 -3.898 1.590  -0.004 H3   JT7 31 
JT7 H4   H4  H  0 1 N N N N N N -42.621 57.847 -46.132 -4.649 0.554  -2.128 H4   JT7 32 
JT7 H5   H5  H  0 1 N N N N N N -43.271 57.416 -44.514 -5.496 -0.714 -1.210 H5   JT7 33 
JT7 H6   H6  H  0 1 N N N N N N -44.183 55.927 -47.035 -6.857 1.075  -0.088 H6   JT7 34 
JT7 H7   H7  H  0 1 N N N N N N -44.761 55.001 -44.824 -5.475 2.868  -2.135 H7   JT7 35 
JT7 H8   H8  H  0 1 N N N N N N -45.562 56.552 -44.400 -6.812 3.353  -1.066 H8   JT7 36 
JT7 H9   H9  H  0 1 N N N N N N -46.209 55.543 -45.738 -5.229 2.923  -0.373 H9   JT7 37 
JT7 H10  H10 H  0 1 N N N N N N -46.145 57.434 -47.163 -7.707 -0.111 -2.093 H10  JT7 38 
JT7 H11  H11 H  0 1 N N N N N N -45.438 58.462 -45.871 -8.259 1.581  -2.069 H11  JT7 39 
JT7 H12  H12 H  0 1 N N N N N N -44.613 58.322 -47.460 -6.922 1.095  -3.139 H12  JT7 40 
JT7 H13  H13 H  0 1 N N N N N N -40.144 56.738 -45.250 -3.177 -1.257 -0.395 H13  JT7 41 
JT7 H14  H14 H  0 1 N N N N N N -38.951 57.400 -43.240 -0.576 -1.131 -1.091 H14  JT7 42 
JT7 H15  H15 H  0 1 N N N N N N -38.931 54.577 -42.074 -0.692 -1.515 1.934  H15  JT7 43 
JT7 H16  H16 H  0 1 N N N N N N -38.478 54.973 -43.766 -1.687 -2.413 0.762  H16  JT7 44 
JT7 H17  H17 H  0 1 N N N N N N -37.122 56.271 -41.294 1.364  -2.348 0.755  H17  JT7 45 
JT7 H18  H18 H  0 1 N N N N N N -36.777 53.768 -41.431 -0.578 -4.508 1.693  H18  JT7 46 
JT7 H19  H19 H  0 1 N N N N N N -36.300 53.937 -43.154 1.191  -4.674 1.597  H19  JT7 47 
JT7 H20  H20 H  0 1 N N N N N N -35.269 54.643 -41.864 0.466  -3.523 2.745  H20  JT7 48 
JT7 H21  H21 H  0 1 N N N N N N -35.320 56.804 -42.934 -0.668 -4.048 -0.761 H21  JT7 49 
JT7 H22  H22 H  0 1 N N N N N N -36.218 55.953 -44.237 0.313  -2.736 -1.457 H22  JT7 50 
JT7 H23  H23 H  0 1 N N N N N N -36.866 57.481 -43.549 1.102  -4.214 -0.857 H23  JT7 51 
JT7 H24  H24 H  0 1 N N N N N N -39.956 56.161 -40.724 0.557  0.812  0.772  H24  JT7 52 
JT7 H25  H25 H  0 1 N N N N N N -41.822 59.723 -39.747 2.004  1.851  1.202  H25  JT7 53 
JT7 H26  H26 H  0 1 N N N N N N -42.403 59.957 -37.330 4.051  3.125  1.673  H26  JT7 54 
JT7 H27  H27 H  0 1 N N N N N N -39.274 57.191 -36.369 6.317  0.397  -0.719 H27  JT7 55 
JT7 H28  H28 H  0 1 N N N N N N -41.133 57.929 -33.295 7.553  2.069  -0.902 H28  JT7 56 
JT7 H29  H29 H  0 1 N N N N N N -41.118 56.638 -34.543 8.474  2.726  0.472  H29  JT7 57 
JT7 H30  H30 H  0 1 N N N N N N -39.650 57.635 -34.265 7.852  1.059  0.533  H30  JT7 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JT7 O02  B28 SING N N 1  
JT7 B28  O03 SING N N 2  
JT7 B28  C04 SING N N 3  
JT7 C08  C06 SING N N 4  
JT7 C06  C05 SING N N 5  
JT7 C06  C07 SING N N 6  
JT7 C05  C04 SING N N 7  
JT7 C04  N09 SING N N 8  
JT7 N09  C10 SING N N 9  
JT7 C10  O11 DOUB N N 10 
JT7 C10  C12 SING N N 11 
JT7 C16  C14 SING N N 12 
JT7 C13  C12 SING N N 13 
JT7 C13  C14 SING N N 14 
JT7 C12  N17 SING N N 15 
JT7 C14  C15 SING N N 16 
JT7 O19  C18 DOUB N N 17 
JT7 N17  C18 SING N N 18 
JT7 C18  C20 SING N N 19 
JT7 C20  C21 DOUB Y N 20 
JT7 C20  C25 SING Y N 21 
JT7 CL01 C25 SING N N 22 
JT7 C21  C22 SING Y N 23 
JT7 C25  C24 DOUB Y N 24 
JT7 C22  C23 DOUB Y N 25 
JT7 C24  C23 SING Y N 26 
JT7 C23  O26 SING N N 27 
JT7 O26  C27 SING N N 28 
JT7 O02  H1  SING N N 29 
JT7 O03  H2  SING N N 30 
JT7 C04  H3  SING N N 31 
JT7 C05  H4  SING N N 32 
JT7 C05  H5  SING N N 33 
JT7 C06  H6  SING N N 34 
JT7 C07  H7  SING N N 35 
JT7 C07  H8  SING N N 36 
JT7 C07  H9  SING N N 37 
JT7 C08  H10 SING N N 38 
JT7 C08  H11 SING N N 39 
JT7 C08  H12 SING N N 40 
JT7 N09  H13 SING N N 41 
JT7 C12  H14 SING N N 42 
JT7 C13  H15 SING N N 43 
JT7 C13  H16 SING N N 44 
JT7 C14  H17 SING N N 45 
JT7 C15  H18 SING N N 46 
JT7 C15  H19 SING N N 47 
JT7 C15  H20 SING N N 48 
JT7 C16  H21 SING N N 49 
JT7 C16  H22 SING N N 50 
JT7 C16  H23 SING N N 51 
JT7 N17  H24 SING N N 52 
JT7 C21  H25 SING N N 53 
JT7 C22  H26 SING N N 54 
JT7 C24  H27 SING N N 55 
JT7 C27  H28 SING N N 56 
JT7 C27  H29 SING N N 57 
JT7 C27  H30 SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JT7 SMILES           ACDLabs              12.01 "Clc1c(C(NC(C(NC(CC(C)C)B(O)O)=O)CC(C)C)=O)ccc(OC)c1"                                                                                                                         
JT7 InChI            InChI                1.03  "InChI=1S/C19H30BClN2O5/c1-11(2)8-16(19(25)23-17(20(26)27)9-12(3)4)22-18(24)14-7-6-13(28-5)10-15(14)21/h6-7,10-12,16-17,26-27H,8-9H2,1-5H3,(H,22,24)(H,23,25)/t16-,17-/m0/s1" 
JT7 InChIKey         InChI                1.03  IUZAVACFOSUDSF-IRXDYDNUSA-N                                                                                                                                                   
JT7 SMILES_CANONICAL CACTVS               3.385 "COc1ccc(C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)B(O)O)c(Cl)c1"                                                                                                               
JT7 SMILES           CACTVS               3.385 "COc1ccc(C(=O)N[CH](CC(C)C)C(=O)N[CH](CC(C)C)B(O)O)c(Cl)c1"                                                                                                                   
JT7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "B([C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)c1ccc(cc1Cl)OC)(O)O"                                                                                                                 
JT7 SMILES           "OpenEye OEToolkits" 2.0.6 "B(C(CC(C)C)NC(=O)C(CC(C)C)NC(=O)c1ccc(cc1Cl)OC)(O)O"                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JT7 "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(1R)-1-borono-3-methylbutyl]-N~2~-(2-chloro-4-methoxybenzene-1-carbonyl)-L-leucinamide"                                  
JT7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[(1~{R})-1-[[(2~{S})-2-[(2-chloranyl-4-methoxy-phenyl)carbonylamino]-4-methyl-pentanoyl]amino]-3-methyl-butyl]boronic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JT7 "Create component" 2017-11-01 RCSB 
JT7 "Initial release"  2019-06-26 RCSB 
JT7 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            JT7 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               B28 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
