data_I67
#

_chem_comp.id                                   I67
_chem_comp.name                                 "N-{[4-({[3,5-dicyano-4-ethyl-6-(4-methyl-1,4-diazepan-1-yl)pyridin-2-yl]sulfanyl}methyl)phenyl]methyl}glycinamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H31 N7 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-10-04
_chem_comp.pdbx_modified_date                   2022-03-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       477.625
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    I67
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7SFC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
I67  C01  C1   C  0  1  N  N  N  -23.052  -26.262  28.649  -4.367  -4.356   1.131  C01  I67   1  
I67  C02  C2   C  0  1  N  N  N  -23.458  -24.989  27.777  -4.082  -3.872  -0.293  C02  I67   2  
I67  C03  C3   C  0  1  Y  N  N  -22.267  -24.372  27.054  -3.325  -2.570  -0.239  C03  I67   3  
I67  C04  C4   C  0  1  Y  N  N  -21.707  -24.995  25.908  -4.003  -1.349  -0.210  C04  I67   4  
I67  C05  C5   C  0  1  N  N  N  -22.312  -26.303  25.404  -5.434  -1.312  -0.236  C05  I67   5  
I67  C07  C6   C  0  1  Y  N  N  -20.610  -24.379  25.288  -3.259  -0.153  -0.154  C07  I67   6  
I67  C09  C7   C  0  1  N  N  N  -20.009  -26.331  23.674  -2.957   2.184  -0.066  C09  I67   7  
I67  C10  C8   C  0  1  N  N  N  -18.682  -26.959  23.199  -3.532   3.428  -0.575  C10  I67   8  
I67  C11  C9   C  0  1  N  N  N  -17.492  -26.570  24.094  -4.761   3.871   0.245  C11  I67   9  
I67  C13  C10  C  0  1  N  N  N  -17.633  -24.667  22.864  -6.129   1.872   0.653  C13  I67  10  
I67  C14  C11  C  0  1  N  N  N  -18.758  -24.014  23.668  -4.826   1.127   0.994  C14  I67  11  
I67  C15  C12  C  0  1  N  N  N  -16.253  -24.830  24.554  -7.111   3.911  -0.237  C15  I67  12  
I67  C17  C13  C  0  1  Y  N  N  -20.608  -22.617  26.833  -1.258  -1.316  -0.160  C17  I67  13  
I67  C19  C14  C  0  1  N  N  N  -18.831  -20.477  25.910   0.781   0.507  -0.065  C19  I67  14  
I67  C20  C15  C  0  1  Y  N  N  -17.383  -20.950  26.062   2.261   0.785  -0.027  C20  I67  15  
I67  C21  C16  C  0  1  Y  N  N  -16.479  -20.778  24.996   2.918   0.871   1.186  C21  I67  16  
I67  C22  C17  C  0  1  Y  N  N  -15.175  -21.210  25.131   4.276   1.125   1.221  C22  I67  17  
I67  C23  C18  C  0  1  Y  N  N  -14.754  -21.816  26.332   4.978   1.293   0.042  C23  I67  18  
I67  C24  C19  C  0  1  N  N  N  -13.297  -22.293  26.457   6.459   1.571   0.079  C24  I67  19  
I67  C26  C20  C  0  1  N  N  N  -12.000  -22.876  24.283   8.542   0.307   0.076  C26  I67  20  
I67  C27  C21  C  0  1  N  N  N  -11.215  -21.516  24.395   9.299  -0.996   0.047  C27  I67  21  
I67  C30  C22  C  0  1  Y  N  N  -15.649  -21.991  27.388   4.322   1.206  -1.172  C30  I67  22  
I67  C31  C23  C  0  1  Y  N  N  -16.968  -21.558  27.253   2.964   0.947  -1.207  C31  I67  23  
I67  C32  C24  C  0  1  Y  N  N  -21.693  -23.162  27.507  -1.929  -2.555  -0.210  C32  I67  24  
I67  C33  C25  C  0  1  N  N  N  -22.245  -22.438  28.733  -1.189  -3.780  -0.232  C33  I67  25  
I67  N06  N1   N  0  1  N  N  N  -22.775  -27.272  25.047  -6.569  -1.283  -0.257  N06  I67  26  
I67  N08  N2   N  0  1  N  N  N  -19.865  -24.905  24.031  -3.918   1.059  -0.125  N08  I67  27  
I67  N12  N3   N  0  1  N  N  N  -16.819  -25.486  23.595  -5.898   3.085  -0.166  N12  I67  28  
I67  N16  N4   N  0  1  Y  N  N  -20.099  -23.225  25.755  -1.936  -0.179  -0.128  N16  I67  29  
I67  N25  N5   N  0  1  N  N  N  -13.026  -23.238  25.328   7.194   0.305   0.051  N25  I67  30  
I67  N28  N6   N  0  1  N  N  N  -10.824  -21.056  23.080  10.742  -0.724   0.083  N28  I67  31  
I67  N34  N7   N  0  1  N  N  N  -22.634  -21.875  29.639  -0.601  -4.753  -0.249  N34  I67  32  
I67  O29  O1   O  0  1  N  N  N  -11.778  -23.621  23.377   9.145   1.358   0.124  O29  I67  33  
I67  S18  S1   S  0  1  N  N  N  -19.797  -21.013  27.376   0.503  -1.281  -0.124  S18  I67  34  
I67  H1   H1   H  0  1  N  N  N  -23.946  -26.666  29.147  -4.914  -5.298   1.092  H1   I67  35  
I67  H2   H2   H  0  1  N  N  N  -22.618  -27.032  27.994  -3.425  -4.505   1.659  H2   I67  36  
I67  H3   H3   H  0  1  N  N  N  -22.312  -25.966  29.407  -4.964  -3.610   1.655  H3   I67  37  
I67  H4   H4   H  0  1  N  N  N  -23.898  -24.231  28.442  -3.485  -4.618  -0.817  H4   I67  38  
I67  H5   H5   H  0  1  N  N  N  -24.204  -25.297  27.029  -5.024  -3.724  -0.821  H5   I67  39  
I67  H6   H6   H  0  1  N  N  N  -20.750  -26.419  22.866  -2.079   1.931  -0.661  H6   I67  40  
I67  H7   H7   H  0  1  N  N  N  -20.363  -26.882  24.558  -2.651   2.335   0.969  H7   I67  41  
I67  H8   H8   H  0  1  N  N  N  -18.787  -28.054  23.208  -2.776   4.212  -0.533  H8   I67  42  
I67  H9   H9   H  0  1  N  N  N  -18.478  -26.618  22.173  -3.832   3.282  -1.612  H9   I67  43  
I67  H10  H10  H  0  1  N  N  N  -17.866  -26.326  25.099  -4.570   3.711   1.306  H10  I67  44  
I67  H11  H11  H  0  1  N  N  N  -16.799  -27.422  24.157  -4.959   4.928   0.065  H11  I67  45  
I67  H12  H12  H  0  1  N  N  N  -17.015  -23.869  22.426  -6.787   1.197   0.105  H12  I67  46  
I67  H13  H13  H  0  1  N  N  N  -18.087  -25.263  22.058  -6.622   2.163   1.581  H13  I67  47  
I67  H14  H14  H  0  1  N  N  N  -18.325  -23.614  24.597  -4.332   1.641   1.819  H14  I67  48  
I67  H15  H15  H  0  1  N  N  N  -19.169  -23.188  23.069  -5.072   0.113   1.311  H15  I67  49  
I67  H16  H16  H  0  1  N  N  N  -15.604  -25.507  25.129  -7.361   4.276   0.759  H16  I67  50  
I67  H17  H17  H  0  1  N  N  N  -15.649  -24.013  24.133  -6.936   4.758  -0.901  H17  I67  51  
I67  H18  H18  H  0  1  N  N  N  -17.025  -24.412  25.217  -7.936   3.312  -0.623  H18  I67  52  
I67  H19  H19  H  0  1  N  N  N  -18.854  -19.380  25.835   0.311   0.918   0.828  H19  I67  53  
I67  H20  H20  H  0  1  N  N  N  -19.268  -20.916  25.001   0.346   0.971  -0.950  H20  I67  54  
I67  H21  H21  H  0  1  N  N  N  -16.804  -20.311  24.078   2.369   0.739   2.107  H21  I67  55  
I67  H22  H22  H  0  1  N  N  N  -14.477  -21.084  24.316   4.789   1.193   2.169  H22  I67  56  
I67  H23  H23  H  0  1  N  N  N  -13.153  -22.808  27.418   6.737   2.173  -0.785  H23  I67  57  
I67  H24  H24  H  0  1  N  N  N  -12.615  -21.432  26.396   6.703   2.113   0.993  H24  I67  58  
I67  H25  H25  H  0  1  N  N  N  -10.315  -21.665  25.010   9.020  -1.597   0.911  H25  I67  59  
I67  H26  H26  H  0  1  N  N  N  -11.861  -20.761  24.867   9.054  -1.537  -0.867  H26  I67  60  
I67  H27  H27  H  0  1  N  N  N  -15.322  -22.459  28.305   4.870   1.337  -2.093  H27  I67  61  
I67  H28  H28  H  0  1  N  N  N  -17.667  -21.691  28.065   2.452   0.876  -2.155  H28  I67  62  
I67  H30  H30  H  0  1  N  N  N  -13.522  -24.104  25.267   6.712  -0.536   0.013  H30  I67  63  
I67  H31  H31  H  0  1  N  N  N  -10.327  -20.192  23.163  11.272  -1.583   0.064  H31  I67  64  
I67  H32  H32  H  0  1  N  N  N  -10.235  -21.740  22.649  11.014  -0.114  -0.673  H32  I67  65  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
I67  C13  N12  SING  N  N   1  
I67  C13  C14  SING  N  N   2  
I67  N28  C27  SING  N  N   3  
I67  C10  C09  SING  N  N   4  
I67  C10  C11  SING  N  N   5  
I67  O29  C26  DOUB  N  N   6  
I67  N12  C11  SING  N  N   7  
I67  N12  C15  SING  N  N   8  
I67  C14  N08  SING  N  N   9  
I67  C09  N08  SING  N  N  10  
I67  N08  C07  SING  N  N  11  
I67  C26  C27  SING  N  N  12  
I67  C26  N25  SING  N  N  13  
I67  C21  C22  DOUB  Y  N  14  
I67  C21  C20  SING  Y  N  15  
I67  N06  C05  TRIP  N  N  16  
I67  C22  C23  SING  Y  N  17  
I67  C07  N16  DOUB  Y  N  18  
I67  C07  C04  SING  Y  N  19  
I67  N25  C24  SING  N  N  20  
I67  C05  C04  SING  N  N  21  
I67  N16  C17  SING  Y  N  22  
I67  C04  C03  DOUB  Y  N  23  
I67  C19  C20  SING  N  N  24  
I67  C19  S18  SING  N  N  25  
I67  C20  C31  DOUB  Y  N  26  
I67  C23  C24  SING  N  N  27  
I67  C23  C30  DOUB  Y  N  28  
I67  C17  S18  SING  N  N  29  
I67  C17  C32  DOUB  Y  N  30  
I67  C03  C32  SING  Y  N  31  
I67  C03  C02  SING  N  N  32  
I67  C31  C30  SING  Y  N  33  
I67  C32  C33  SING  N  N  34  
I67  C02  C01  SING  N  N  35  
I67  C33  N34  TRIP  N  N  36  
I67  C01  H1   SING  N  N  37  
I67  C01  H2   SING  N  N  38  
I67  C01  H3   SING  N  N  39  
I67  C02  H4   SING  N  N  40  
I67  C02  H5   SING  N  N  41  
I67  C09  H6   SING  N  N  42  
I67  C09  H7   SING  N  N  43  
I67  C10  H8   SING  N  N  44  
I67  C10  H9   SING  N  N  45  
I67  C11  H10  SING  N  N  46  
I67  C11  H11  SING  N  N  47  
I67  C13  H12  SING  N  N  48  
I67  C13  H13  SING  N  N  49  
I67  C14  H14  SING  N  N  50  
I67  C14  H15  SING  N  N  51  
I67  C15  H16  SING  N  N  52  
I67  C15  H17  SING  N  N  53  
I67  C15  H18  SING  N  N  54  
I67  C19  H19  SING  N  N  55  
I67  C19  H20  SING  N  N  56  
I67  C21  H21  SING  N  N  57  
I67  C22  H22  SING  N  N  58  
I67  C24  H23  SING  N  N  59  
I67  C24  H24  SING  N  N  60  
I67  C27  H25  SING  N  N  61  
I67  C27  H26  SING  N  N  62  
I67  C30  H27  SING  N  N  63  
I67  C31  H28  SING  N  N  64  
I67  N25  H30  SING  N  N  65  
I67  N28  H31  SING  N  N  66  
I67  N28  H32  SING  N  N  67  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
I67  SMILES            ACDLabs               12.01  "CN1CCCN(CC1)c1nc(SCc2ccc(CNC(=O)CN)cc2)c(C#N)c(CC)c1C#N"  
I67  InChI             InChI                 1.03   "InChI=1S/C25H31N7OS/c1-3-20-21(13-26)24(32-10-4-9-31(2)11-12-32)30-25(22(20)14-27)34-17-19-7-5-18(6-8-19)16-29-23(33)15-28/h5-8H,3-4,9-12,15-17,28H2,1-2H3,(H,29,33)"  
I67  InChIKey          InChI                 1.03   QPLFMVVUDGWTPG-UHFFFAOYSA-N  
I67  SMILES_CANONICAL  CACTVS                3.385  "CCc1c(C#N)c(SCc2ccc(CNC(=O)CN)cc2)nc(N3CCCN(C)CC3)c1C#N"  
I67  SMILES            CACTVS                3.385  "CCc1c(C#N)c(SCc2ccc(CNC(=O)CN)cc2)nc(N3CCCN(C)CC3)c1C#N"  
I67  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCc1c(c(nc(c1C#N)SCc2ccc(cc2)CNC(=O)CN)N3CCCN(CC3)C)C#N"  
I67  SMILES            "OpenEye OEToolkits"  2.0.7  "CCc1c(c(nc(c1C#N)SCc2ccc(cc2)CNC(=O)CN)N3CCCN(CC3)C)C#N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
I67  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{[4-({[3,5-dicyano-4-ethyl-6-(4-methyl-1,4-diazepan-1-yl)pyridin-2-yl]sulfanyl}methyl)phenyl]methyl}glycinamide"  
I67  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-azanyl-~{N}-[[4-[[3,5-dicyano-4-ethyl-6-(4-methyl-1,4-diazepan-1-yl)pyridin-2-yl]sulfanylmethyl]phenyl]methyl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
I67  "Create component"  2021-10-04  RCSB  
I67  "Initial release"   2022-03-30  RCSB  
##
