data_GN7
# 
_chem_comp.id                                    GN7 
_chem_comp.name                                  "N7-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 
_chem_comp.type                                  "DNA LINKING" 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C10 H14 N5 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               DG 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        347.221 
_chem_comp.one_letter_code                       G 
_chem_comp.three_letter_code                     GN7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1GN7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
GN7 P      P    P 0 1 N N N 9.121  -5.982 4.294  0.855  -0.241 -4.909 P      GN7 1  
GN7 OP1    O1P  O 0 1 N N N 10.058 -5.162 3.491  1.719  0.926  -4.625 OP1    GN7 2  
GN7 OP2    O2P  O 0 1 N N N 9.394  -7.423 4.486  1.732  -1.401 -5.600 OP2    GN7 3  
GN7 OP3    O3P  O 0 1 N Y N 8.968  -5.296 5.779  -0.330 0.199  -5.905 OP3    GN7 4  
GN7 "O5'"  O5*  O 0 1 N N N 7.643  -5.838 3.636  0.225  -0.791 -3.534 "O5'"  GN7 5  
GN7 "C5'"  C5*  C 0 1 N N N 7.206  -6.510 2.437  -0.536 0.279  -2.972 "C5'"  GN7 6  
GN7 "C4'"  C4*  C 0 1 N N R 5.823  -7.158 2.645  -1.166 -0.179 -1.655 "C4'"  GN7 7  
GN7 "O4'"  O4*  O 0 1 N N N 4.823  -6.186 3.001  -0.146 -0.445 -0.664 "O4'"  GN7 8  
GN7 "C3'"  C3*  C 0 1 N N S 5.227  -7.879 1.434  -2.000 0.962  -1.021 "C3'"  GN7 9  
GN7 "O3'"  O3*  O 0 1 N N N 4.245  -8.800 1.957  -3.330 0.972  -1.543 "O3'"  GN7 10 
GN7 "C2'"  C2*  C 0 1 N N N 4.571  -6.691 0.743  -1.997 0.573  0.476  "C2'"  GN7 11 
GN7 "C1'"  C1*  C 0 1 N N R 3.900  -5.982 1.909  -0.783 -0.364 0.621  "C1'"  GN7 12 
GN7 N9     N9   N 0 1 Y N N 4.182  -2.319 1.769  1.800  1.306  2.471  N9     GN7 13 
GN7 C8     C8   C 0 1 Y N N 4.626  -3.534 1.865  1.174  1.026  1.360  C8     GN7 14 
GN7 N7     N7   N 0 1 Y N N 3.696  -4.526 1.777  0.152  0.181  1.607  N7     GN7 15 
GN7 C5     C5   C 0 1 Y N N 2.509  -3.848 1.598  0.154  -0.072 2.965  C5     GN7 16 
GN7 C6     C6   C 0 1 N N N 1.161  -4.298 1.435  -0.635 -0.852 3.826  C6     GN7 17 
GN7 O6     O6   O 0 1 N N N 0.738  -5.451 1.407  -1.572 -1.503 3.396  O6     GN7 18 
GN7 N1     N1   N 0 1 N N N 0.290  -3.221 1.289  -0.328 -0.866 5.143  N1     GN7 19 
GN7 C2     C2   C 0 1 N N N 0.692  -1.904 1.302  0.718  -0.130 5.613  C2     GN7 20 
GN7 N2     N2   N 0 1 N N N -0.268 -1.022 1.139  1.003  -0.160 6.956  N2     GN7 21 
GN7 N3     N3   N 0 1 N N N 1.947  -1.483 1.453  1.464  0.601  4.820  N3     GN7 22 
GN7 C4     C4   C 0 1 Y N N 2.811  -2.506 1.596  1.220  0.660  3.497  C4     GN7 23 
GN7 HOP2   2HOP H 0 0 N N N 8.793  -7.948 5.000  2.090  -1.032 -6.418 HOP2   GN7 24 
GN7 HOP3   3HOP H 0 0 N N N 8.367  -5.821 6.293  -0.868 -0.588 -6.064 HOP3   GN7 25 
GN7 "H5'"  1H5* H 0 1 N N N 7.923  -7.277 2.144  -1.323 0.569  -3.668 "H5'"  GN7 26 
GN7 "H5''" 2H5* H 0 0 N N N 7.136  -5.781 1.630  0.116  1.131  -2.785 "H5''" GN7 27 
GN7 "H4'"  H4*  H 0 1 N N N 5.920  -7.870 3.465  -1.783 -1.063 -1.813 "H4'"  GN7 28 
GN7 "H3'"  H3*  H 0 1 N N N 5.995  -8.383 0.847  -1.517 1.927  -1.174 "H3'"  GN7 29 
GN7 "HO3'" *HO3 H 0 0 N Y N 3.875  -9.247 1.205  -3.821 1.641  -1.045 "HO3'" GN7 30 
GN7 "H2'"  1H2* H 0 1 N N N 5.355  -6.058 0.326  -2.917 0.049  0.736  "H2'"  GN7 31 
GN7 "H2''" 2H2* H 0 0 N N N 3.864  -6.962 -0.041 -1.872 1.458  1.100  "H2''" GN7 32 
GN7 "H1'"  H1*  H 0 1 N N N 2.952  -6.476 2.123  -1.115 -1.354 0.933  "H1'"  GN7 33 
GN7 H8     H8   H 0 1 N N N 5.684  -3.752 2.009  1.436  1.414  0.387  H8     GN7 34 
GN7 HN1    HN1  H 0 1 N N N -0.703 -3.401 1.158  -0.860 -1.397 5.757  HN1    GN7 35 
GN7 HN21   1HN2 H 0 0 N N N -1.205 -1.380 1.034  1.747  0.355  7.305  HN21   GN7 36 
GN7 HN22   2HN2 H 0 0 N N N -0.081 -0.031 1.113  0.458  -0.693 7.556  HN22   GN7 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
GN7 P     OP1    DOUB N N 1  
GN7 P     OP2    SING N N 2  
GN7 P     OP3    SING N N 3  
GN7 P     "O5'"  SING N N 4  
GN7 OP2   HOP2   SING N N 5  
GN7 OP3   HOP3   SING N N 6  
GN7 "O5'" "C5'"  SING N N 7  
GN7 "C5'" "C4'"  SING N N 8  
GN7 "C5'" "H5'"  SING N N 9  
GN7 "C5'" "H5''" SING N N 10 
GN7 "C4'" "O4'"  SING N N 11 
GN7 "C4'" "C3'"  SING N N 12 
GN7 "C4'" "H4'"  SING N N 13 
GN7 "O4'" "C1'"  SING N N 14 
GN7 "C3'" "O3'"  SING N N 15 
GN7 "C3'" "C2'"  SING N N 16 
GN7 "C3'" "H3'"  SING N N 17 
GN7 "O3'" "HO3'" SING N N 18 
GN7 "C2'" "C1'"  SING N N 19 
GN7 "C2'" "H2'"  SING N N 20 
GN7 "C2'" "H2''" SING N N 21 
GN7 "C1'" N7     SING N N 22 
GN7 "C1'" "H1'"  SING N N 23 
GN7 N9    C8     DOUB Y N 24 
GN7 N9    C4     SING Y N 25 
GN7 C8    N7     SING Y N 26 
GN7 C8    H8     SING N N 27 
GN7 N7    C5     SING Y N 28 
GN7 C5    C6     SING N N 29 
GN7 C5    C4     DOUB Y N 30 
GN7 C6    O6     DOUB N N 31 
GN7 C6    N1     SING N N 32 
GN7 N1    C2     SING N N 33 
GN7 N1    HN1    SING N N 34 
GN7 C2    N2     SING N N 35 
GN7 C2    N3     DOUB N N 36 
GN7 N2    HN21   SING N N 37 
GN7 N2    HN22   SING N N 38 
GN7 N3    C4     SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
GN7 SMILES           ACDLabs              10.04 "O=C3c1c(ncn1C2OC(C(O)C2)COP(=O)(O)O)N=C(N)N3"                                                                                                          
GN7 SMILES_CANONICAL CACTVS               3.341 "NC1=Nc2ncn([C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3)c2C(=O)N1"                                                                                           
GN7 SMILES           CACTVS               3.341 "NC1=Nc2ncn([CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3)c2C(=O)N1"                                                                                               
GN7 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)C(=O)NC(=N2)N"                                                                                           
GN7 SMILES           "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1C3CC(C(O3)COP(=O)(O)O)O)C(=O)NC(=N2)N"                                                                                                        
GN7 InChI            InChI                1.03  "InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)15(3-12-8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1" 
GN7 InChIKey         InChI                1.03  QJBOPENFRRNEQL-KVQBGUIXSA-N                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
GN7 "SYSTEMATIC NAME" ACDLabs              10.04 "2-amino-7-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-1,7-dihydro-6H-purin-6-one"    
GN7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-7-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
GN7 "Create component"  1999-07-08 RCSB 
GN7 "Modify descriptor" 2011-06-04 RCSB 
# 
