data_A1AC7
# 
_chem_comp.id                                    A1AC7 
_chem_comp.name                                  "N-{3-[(2-amino-6-methylpyrimidin-4-yl)amino]-5-[(dimethylamino)methyl]phenyl}-3-[(quinolin-4-yl)amino]benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H30 N8 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2024-01-18 
_chem_comp.pdbx_modified_date                    2024-09-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        518.612 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AC7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   Y 
_chem_comp.pdbx_model_coordinates_db_code        8VPG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AC7 C2   C1  C 0 1 Y N N N N N -43.458 -25.654 3.454  ? ? ? C2   A1AC7 1  
A1AC7 C7   C2  C 0 1 Y N N N N N -39.240 -25.954 0.183  ? ? ? C7   A1AC7 2  
A1AC7 C8   C3  C 0 1 Y N N N N N -37.981 -25.632 -0.323 ? ? ? C8   A1AC7 3  
A1AC7 C9   C4  C 0 1 N N N N N N -36.755 -26.442 0.056  ? ? ? C9   A1AC7 4  
A1AC7 C11  C5  C 0 1 N N N N N N -37.732 -28.616 0.891  ? ? ? C11  A1AC7 5  
A1AC7 C13  C6  C 0 1 Y N N N N N -37.853 -24.548 -1.176 ? ? ? C13  A1AC7 6  
A1AC7 C16  C7  C 0 1 N N N N N N -38.010 -22.074 -3.166 ? ? ? C16  A1AC7 7  
A1AC7 C19  C8  C 0 1 Y N N N N N -34.941 -24.264 -3.655 ? ? ? C19  A1AC7 8  
A1AC7 C24  C9  C 0 1 Y N N N N N -33.950 -19.416 -1.566 ? ? ? C24  A1AC7 9  
A1AC7 C25  C10 C 0 1 Y N N N N N -33.906 -18.159 -0.986 ? ? ? C25  A1AC7 10 
A1AC7 C27  C11 C 0 1 Y N N N N N -32.854 -18.942 0.898  ? ? ? C27  A1AC7 11 
A1AC7 C28  C12 C 0 1 Y N N N N N -32.851 -20.268 0.396  ? ? ? C28  A1AC7 12 
A1AC7 C31  C13 C 0 1 Y N N N N N -31.721 -19.703 2.890  ? ? ? C31  A1AC7 13 
A1AC7 C33  C14 C 0 1 Y N N N N N -35.695 -21.960 -2.317 ? ? ? C33  A1AC7 14 
A1AC7 C35  C15 C 0 1 Y N N N N N -40.212 -24.109 -1.017 ? ? ? C35  A1AC7 15 
A1AC7 C36  C16 C 0 1 Y N N N N N -40.866 -25.601 2.776  ? ? ? C36  A1AC7 16 
A1AC7 C12  C17 C 0 1 N N N N N N -37.425 -26.766 2.488  ? ? ? C12  A1AC7 17 
A1AC7 C14  C18 C 0 1 Y N N N N N -38.961 -23.780 -1.531 ? ? ? C14  A1AC7 18 
A1AC7 C17  C19 C 0 1 Y N N N N N -36.629 -22.644 -3.089 ? ? ? C17  A1AC7 19 
A1AC7 C18  C20 C 0 1 Y N N N N N -36.242 -23.801 -3.758 ? ? ? C18  A1AC7 20 
A1AC7 C20  C21 C 0 1 Y N N N N N -34.013 -23.582 -2.886 ? ? ? C20  A1AC7 21 
A1AC7 C21  C22 C 0 1 Y N N N N N -34.387 -22.425 -2.212 ? ? ? C21  A1AC7 22 
A1AC7 C23  C23 C 0 1 Y N N N N N -33.424 -20.497 -0.892 ? ? ? C23  A1AC7 23 
A1AC7 C29  C24 C 0 1 Y N N N N N -32.264 -21.286 1.186  ? ? ? C29  A1AC7 24 
A1AC7 C30  C25 C 0 1 Y N N N N N -31.715 -21.000 2.402  ? ? ? C30  A1AC7 25 
A1AC7 C32  C26 C 0 1 Y N N N N N -32.276 -18.686 2.163  ? ? ? C32  A1AC7 26 
A1AC7 C37  C27 C 0 1 Y N N N N N -41.255 -25.662 4.103  ? ? ? C37  A1AC7 27 
A1AC7 C38  C28 C 0 1 N N N N N N -40.257 -25.704 5.220  ? ? ? C38  A1AC7 28 
A1AC7 C4   C29 C 0 1 Y N N N N N -41.878 -25.570 1.815  ? ? ? C4   A1AC7 29 
A1AC7 C6   C30 C 0 1 Y N N N N N -40.351 -25.191 -0.161 ? ? ? C6   A1AC7 30 
A1AC7 N1   N1  N 0 1 N N N N N N -44.744 -25.661 3.805  ? ? ? N1   A1AC7 31 
A1AC7 N10  N2  N 1 1 N N N N N N -36.955 -27.387 1.215  ? ? ? N10  A1AC7 32 
A1AC7 N15  N3  N 0 1 N N N N N N -38.983 -22.668 -2.420 ? ? ? N15  A1AC7 33 
A1AC7 N22  N4  N 0 1 N N N N N N -33.411 -21.792 -1.410 ? ? ? N22  A1AC7 34 
A1AC7 N26  N5  N 0 1 Y N N N N N -33.387 -17.893 0.199  ? ? ? N26  A1AC7 35 
A1AC7 N3   N6  N 0 1 Y N N N N N -43.179 -25.596 2.133  ? ? ? N3   A1AC7 36 
A1AC7 N39  N7  N 0 1 Y N N N N N -42.550 -25.688 4.452  ? ? ? N39  A1AC7 37 
A1AC7 N5   N8  N 0 1 N N N N N N -41.585 -25.486 0.462  ? ? ? N5   A1AC7 38 
A1AC7 O34  O1  O 0 1 N N N N N N -38.236 -21.107 -3.889 ? ? ? O34  A1AC7 39 
A1AC7 H7   H1  H 0 1 N N N N N N -39.353 -26.800 0.845  ? ? ? H7   A1AC7 40 
A1AC7 H9A  H2  H 0 1 N N N N N N -36.452 -27.034 -0.820 ? ? ? H9A  A1AC7 41 
A1AC7 H9B  H3  H 0 1 N N N N N N -35.950 -25.741 0.321  ? ? ? H9B  A1AC7 42 
A1AC7 H11A H4  H 0 0 N N N N N N -37.825 -29.240 1.792  ? ? ? H11A A1AC7 43 
A1AC7 H11C H5  H 0 0 N N N N N N -38.734 -28.333 0.535  ? ? ? H11C A1AC7 44 
A1AC7 H11B H6  H 0 0 N N N N N N -37.211 -29.183 0.106  ? ? ? H11B A1AC7 45 
A1AC7 H13  H7  H 0 1 N N N N N N -36.881 -24.294 -1.572 ? ? ? H13  A1AC7 46 
A1AC7 H19  H8  H 0 1 N N N N N N -34.648 -25.163 -4.178 ? ? ? H19  A1AC7 47 
A1AC7 H24  H9  H 0 1 N N N N N N -34.394 -19.548 -2.541 ? ? ? H24  A1AC7 48 
A1AC7 H25  H10 H 0 1 N N N N N N -34.327 -17.336 -1.544 ? ? ? H25  A1AC7 49 
A1AC7 H31  H11 H 0 1 N N N N N N -31.283 -19.493 3.855  ? ? ? H31  A1AC7 50 
A1AC7 H33  H12 H 0 1 N N N N N N -35.987 -21.061 -1.795 ? ? ? H33  A1AC7 51 
A1AC7 H35  H13 H 0 1 N N N N N N -41.077 -23.520 -1.286 ? ? ? H35  A1AC7 52 
A1AC7 H36  H14 H 0 1 N N N N N N -39.823 -25.578 2.496  ? ? ? H36  A1AC7 53 
A1AC7 H12A H15 H 0 0 N N N N N N -37.535 -27.544 3.258  ? ? ? H12A A1AC7 54 
A1AC7 H12B H16 H 0 0 N N N N N N -36.691 -26.019 2.824  ? ? ? H12B A1AC7 55 
A1AC7 H12C H17 H 0 0 N N N N N N -38.396 -26.276 2.320  ? ? ? H12C A1AC7 56 
A1AC7 H18  H18 H 0 1 N N N N N N -36.959 -24.340 -4.360 ? ? ? H18  A1AC7 57 
A1AC7 H20  H19 H 0 1 N N N N N N -33.000 -23.948 -2.810 ? ? ? H20  A1AC7 58 
A1AC7 H29  H20 H 0 1 N N N N N N -32.251 -22.302 0.821  ? ? ? H29  A1AC7 59 
A1AC7 H30  H21 H 0 1 N N N N N N -31.272 -21.791 2.989  ? ? ? H30  A1AC7 60 
A1AC7 H32  H22 H 0 1 N N N N N N -32.273 -17.681 2.558  ? ? ? H32  A1AC7 61 
A1AC7 H38A H23 H 0 0 N N N N N N -40.786 -25.751 6.183  ? ? ? H38A A1AC7 62 
A1AC7 H38C H24 H 0 0 N N N N N N -39.619 -26.593 5.108  ? ? ? H38C A1AC7 63 
A1AC7 H38B H25 H 0 0 N N N N N N -39.633 -24.799 5.188  ? ? ? H38B A1AC7 64 
A1AC7 H1B  H26 H 0 1 N N N N N N -45.314 -25.620 2.985  ? ? ? H1B  A1AC7 65 
A1AC7 H1A  H27 H 0 1 N N N N N N -44.947 -26.500 4.310  ? ? ? H1A  A1AC7 66 
A1AC7 H15  H29 H 0 1 N N N N N N -39.883 -22.242 -2.515 ? ? ? H15  A1AC7 67 
A1AC7 H22  H30 H 0 1 N N N N N N -32.608 -22.343 -1.185 ? ? ? H22  A1AC7 68 
A1AC7 H5   H31 H 0 1 N N N N N N -42.351 -25.658 -0.157 ? ? ? H5   A1AC7 69 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AC7 N1  C2   SING N N 1  
A1AC7 C2  N3   DOUB Y N 2  
A1AC7 N3  C4   SING Y N 3  
A1AC7 C4  N5   SING N N 4  
A1AC7 N5  C6   SING N N 5  
A1AC7 C6  C7   DOUB Y N 6  
A1AC7 C7  C8   SING Y N 7  
A1AC7 C8  C9   SING N N 8  
A1AC7 C9  N10  SING N N 9  
A1AC7 N10 C11  SING N N 10 
A1AC7 N10 C12  SING N N 11 
A1AC7 C8  C13  DOUB Y N 12 
A1AC7 C13 C14  SING Y N 13 
A1AC7 C14 N15  SING N N 14 
A1AC7 N15 C16  SING N N 15 
A1AC7 C16 C17  SING N N 16 
A1AC7 C17 C18  DOUB Y N 17 
A1AC7 C18 C19  SING Y N 18 
A1AC7 C19 C20  DOUB Y N 19 
A1AC7 C20 C21  SING Y N 20 
A1AC7 C21 N22  SING N N 21 
A1AC7 N22 C23  SING N N 22 
A1AC7 C23 C24  DOUB Y N 23 
A1AC7 C24 C25  SING Y N 24 
A1AC7 C25 N26  DOUB Y N 25 
A1AC7 N26 C27  SING Y N 26 
A1AC7 C27 C28  DOUB Y N 27 
A1AC7 C28 C29  SING Y N 28 
A1AC7 C29 C30  DOUB Y N 29 
A1AC7 C30 C31  SING Y N 30 
A1AC7 C31 C32  DOUB Y N 31 
A1AC7 C21 C33  DOUB Y N 32 
A1AC7 C16 O34  DOUB N N 33 
A1AC7 C14 C35  DOUB Y N 34 
A1AC7 C4  C36  DOUB Y N 35 
A1AC7 C36 C37  SING Y N 36 
A1AC7 C37 C38  SING N N 37 
A1AC7 C37 N39  DOUB Y N 38 
A1AC7 N39 C2   SING Y N 39 
A1AC7 C35 C6   SING Y N 40 
A1AC7 C33 C17  SING Y N 41 
A1AC7 C28 C23  SING Y N 42 
A1AC7 C32 C27  SING Y N 43 
A1AC7 C7  H7   SING N N 44 
A1AC7 C9  H9A  SING N N 45 
A1AC7 C9  H9B  SING N N 46 
A1AC7 C11 H11A SING N N 47 
A1AC7 C11 H11C SING N N 48 
A1AC7 C11 H11B SING N N 49 
A1AC7 C13 H13  SING N N 50 
A1AC7 C19 H19  SING N N 51 
A1AC7 C24 H24  SING N N 52 
A1AC7 C25 H25  SING N N 53 
A1AC7 C31 H31  SING N N 54 
A1AC7 C33 H33  SING N N 55 
A1AC7 C35 H35  SING N N 56 
A1AC7 C36 H36  SING N N 57 
A1AC7 C12 H12A SING N N 58 
A1AC7 C12 H12B SING N N 59 
A1AC7 C12 H12C SING N N 60 
A1AC7 C18 H18  SING N N 61 
A1AC7 C20 H20  SING N N 62 
A1AC7 C29 H29  SING N N 63 
A1AC7 C30 H30  SING N N 64 
A1AC7 C32 H32  SING N N 65 
A1AC7 C38 H38A SING N N 66 
A1AC7 C38 H38C SING N N 67 
A1AC7 C38 H38B SING N N 68 
A1AC7 N1  H1B  SING N N 69 
A1AC7 N1  H1A  SING N N 70 
A1AC7 N15 H15  SING N N 71 
A1AC7 N22 H22  SING N N 72 
A1AC7 N5  H5   SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AC7 SMILES           ACDLabs              12.01 "Cc1cc(Nc2cc(C[NH+](C)C)cc(NC(=O)c3cccc(Nc4ccnc5ccccc54)c3)c2)nc(N)n1"                                                                                                                                    
A1AC7 InChI            InChI                1.06  "InChI=1S/C30H30N8O/c1-19-13-28(37-30(31)33-19)35-23-14-20(18-38(2)3)15-24(17-23)36-29(39)21-7-6-8-22(16-21)34-27-11-12-32-26-10-5-4-9-25(26)27/h4-17H,18H2,1-3H3,(H,32,34)(H,36,39)(H3,31,33,35,37)/p+1" 
A1AC7 InChIKey         InChI                1.06  FJKSIMNYGCBSRZ-UHFFFAOYSA-O                                                                                                                                                                               
A1AC7 SMILES_CANONICAL CACTVS               3.385 "C[N+](C)Cc1cc(NC(=O)c2cccc(Nc3ccnc4ccccc34)c2)cc(Nc5cc(C)nc(N)n5)c1"                                                                                                                                     
A1AC7 SMILES           CACTVS               3.385 "C[N+](C)Cc1cc(NC(=O)c2cccc(Nc3ccnc4ccccc34)c2)cc(Nc5cc(C)nc(N)n5)c1"                                                                                                                                     
A1AC7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)N)Nc2cc(cc(c2)NC(=O)c3cccc(c3)Nc4ccnc5c4cccc5)C[N+](C)C"                                                                                                                                     
A1AC7 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)N)Nc2cc(cc(c2)NC(=O)c3cccc(c3)Nc4ccnc5c4cccc5)C[N+](C)C"                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AC7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[3-[(2-azanyl-6-methyl-pyrimidin-4-yl)amino]-5-[(dimethylamino)methyl]phenyl]-3-(quinolin-4-ylamino)benzamide" 
A1AC7 "SYSTEMATIC NAME" ACDLabs              12.01 "(3-[(2-amino-6-methylpyrimidin-4-yl)amino]-5-{3-[(quinolin-4-yl)amino]benzamido}phenyl)-N,N-dimethylmethanaminium"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AC7 "Create component" 2024-01-18 RCSB 
A1AC7 "Initial release"  2024-09-25 RCSB 
# 
