data_9R7
# 
_chem_comp.id                                    9R7 
_chem_comp.name                                  L-gamma-glutamylglycine 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C7 H12 N2 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-06-02 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        204.181 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9R7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5VX0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9R7 N   N   N 0 1 N N N Y Y N -1.361 6.700  29.923 2.921  1.812  -0.497 N   9R7 1  
9R7 CA  CA  C 0 1 N N S Y N N -1.906 8.035  30.077 2.881  0.606  0.341  CA  9R7 2  
9R7 C   C   C 0 1 N N N Y N Y -2.669 8.472  28.824 4.140  -0.195 0.131  C   9R7 3  
9R7 O   O   O 0 1 N N N Y N Y -3.733 9.008  28.921 4.805  -0.024 -0.863 O   9R7 4  
9R7 CB  CB  C 0 1 N N N N N N -0.740 8.989  30.294 1.667  -0.242 -0.043 CB  9R7 5  
9R7 CG  CG  C 0 1 N N N N N N -1.293 10.394 30.465 0.384  0.524  0.287  CG  9R7 6  
9R7 CD  CD  C 0 1 N N N N N N -0.401 11.412 29.773 -0.811 -0.311 -0.091 CD  9R7 7  
9R7 O01 O01 O 0 1 N N N N N N -0.390 11.531 28.598 -0.654 -1.411 -0.578 O01 9R7 8  
9R7 NE  NE  N 0 1 N N N N N N 0.449  12.231 30.576 -2.056 0.164  0.110  NE  9R7 9  
9R7 CZ  CZ  C 0 1 N N N N N N 1.298  13.219 29.936 -3.219 -0.648 -0.258 CZ  9R7 10 
9R7 CH  CH  C 0 1 N N N N N N 2.142  13.797 31.058 -4.482 0.106  0.068  CH  9R7 11 
9R7 O02 O02 O 0 1 N N N N N N 1.955  13.365 32.227 -5.679 -0.447 -0.186 O02 9R7 12 
9R7 O03 O03 O 0 1 N N N N N N 3.014  14.669 30.818 -4.418 1.209  0.557  O03 9R7 13 
9R7 OXT O1  O 0 1 N Y N Y N Y -2.083 8.217  27.661 4.523  -1.098 1.047  O1  9R7 14 
9R7 H   H1  H 0 1 N N N Y Y N -0.869 6.442  30.755 3.677  2.420  -0.219 H1  9R7 15 
9R7 H2  H2  H 0 1 N Y N Y Y N -2.106 6.053  29.762 2.992  1.571  -1.474 H2  9R7 16 
9R7 HA  H4  H 0 1 N N N Y N N -2.579 8.077  30.946 2.805  0.895  1.390  H4  9R7 17 
9R7 H5  H5  H 0 1 N N N N N N -0.184 8.696  31.197 1.697  -0.456 -1.112 H5  9R7 18 
9R7 H6  H6  H 0 1 N N N N N N -0.068 8.958  29.424 1.686  -1.178 0.515  H6  9R7 19 
9R7 H7  H7  H 0 1 N N N N N N -1.348 10.632 31.538 0.354  0.738  1.356  H7  9R7 20 
9R7 H8  H8  H 0 1 N N N N N N -2.301 10.441 30.027 0.366  1.460  -0.271 H8  9R7 21 
9R7 H9  H9  H 0 1 N N N N N N 0.459  12.125 31.570 -2.183 1.043  0.500  H9  9R7 22 
9R7 H10 H10 H 0 1 N N N N N N 1.937  12.746 29.176 -3.189 -0.862 -1.326 H10 9R7 23 
9R7 H11 H11 H 0 1 N N N N N N 0.689  14.005 29.465 -3.200 -1.584 0.301  H11 9R7 24 
9R7 H12 H12 H 0 1 N N N N N N 2.554  13.797 32.824 -6.460 0.076  0.040  H12 9R7 25 
9R7 HXT H13 H 0 1 N Y N Y N Y -2.637 8.524  26.953 5.337  -1.587 0.868  H13 9R7 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9R7 O01 CD  DOUB N N 1  
9R7 C   O   DOUB N N 2  
9R7 C   CA  SING N N 3  
9R7 CD  CG  SING N N 4  
9R7 CD  NE  SING N N 5  
9R7 N   CA  SING N N 6  
9R7 CZ  NE  SING N N 7  
9R7 CZ  CH  SING N N 8  
9R7 CA  CB  SING N N 9  
9R7 CB  CG  SING N N 10 
9R7 O03 CH  DOUB N N 11 
9R7 CH  O02 SING N N 12 
9R7 C   OXT SING N N 13 
9R7 N   H   SING N N 14 
9R7 N   H2  SING N N 15 
9R7 CA  HA  SING N N 16 
9R7 CB  H5  SING N N 17 
9R7 CB  H6  SING N N 18 
9R7 CG  H7  SING N N 19 
9R7 CG  H8  SING N N 20 
9R7 NE  H9  SING N N 21 
9R7 CZ  H10 SING N N 22 
9R7 CZ  H11 SING N N 23 
9R7 O02 H12 SING N N 24 
9R7 OXT HXT SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9R7 SMILES           ACDLabs              12.01 "NC(CCC(NCC(O)=O)=O)C(=O)O"                                                                             
9R7 InChI            InChI                1.03  "InChI=1S/C7H12N2O5/c8-4(7(13)14)1-2-5(10)9-3-6(11)12/h4H,1-3,8H2,(H,9,10)(H,11,12)(H,13,14)/t4-/m0/s1" 
9R7 InChIKey         InChI                1.03  ACIJGUBIMXQCMF-BYPYZUCNSA-N                                                                             
9R7 SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CCC(=O)NCC(O)=O)C(O)=O"                                                                        
9R7 SMILES           CACTVS               3.385 "N[CH](CCC(=O)NCC(O)=O)C(O)=O"                                                                          
9R7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C(CC(=O)NCC(=O)O)[C@@H](C(=O)O)N"                                                                      
9R7 SMILES           "OpenEye OEToolkits" 2.0.6 "C(CC(=O)NCC(=O)O)C(C(=O)O)N"                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9R7 "SYSTEMATIC NAME" ACDLabs              12.01 L-gamma-glutamylglycine                                                         
9R7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-azanyl-5-(2-hydroxy-2-oxoethylamino)-5-oxidanylidene-pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9R7 "Create component" 2017-06-02 RCSB 
9R7 "Initial release"  2017-11-15 RCSB 
9R7 "Modify backbone"  2023-11-03 PDBE 
9R7 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            9R7 
_pdbx_chem_comp_pcm.modified_residue_id                GLN 
_pdbx_chem_comp_pcm.type                               Carboxymethylation 
_pdbx_chem_comp_pcm.category                           "Named protein modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
