data_9I7
#

_chem_comp.id                                   9I7
_chem_comp.name                                 "(1R,2S,5S)-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H34 F3 N5 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-10-13
_chem_comp.pdbx_modified_date                   2022-02-08
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  OBS
_chem_comp.pdbx_replaced_by                     4WI
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       501.542
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9I7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7SI9
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9I7  C18  C1   C  0  1  N  N  N  -11.728  38.461  -20.534   1.262   0.363  -2.824  C18  9I7   1  
9I7  C16  C2   C  0  1  N  N  N  -10.970  37.345  -19.790   2.283  -0.466  -2.042  C16  9I7   2  
9I7  C17  C3   C  0  1  N  N  N  -11.892  36.725  -18.720   3.636  -0.412  -2.753  C17  9I7   3  
9I7  C12  C4   C  0  1  N  N  S   -9.362  41.625  -18.065  -1.173   1.061   0.514  C12  9I7   4  
9I7  C14  C5   C  0  1  N  N  N   -9.855  39.265  -18.395   1.102   0.013   0.086  C14  9I7   5  
9I7  C11  C6   C  0  1  N  N  N  -10.805  42.119  -18.225  -2.187   0.719  -0.547  C11  9I7   6  
9I7  C3   C7   C  0  1  N  N  N  -13.714  42.105  -16.041  -5.502  -0.866  -0.632  C3   9I7   7  
9I7  C4   C8   C  0  1  N  N  S  -13.948  40.659  -16.489  -4.872  -2.201  -0.230  C4   9I7   8  
9I7  C5   C9   C  0  1  N  N  N  -14.773  40.408  -17.772  -5.944  -3.154   0.347  C5   9I7   9  
9I7  C6   C10  C  0  1  N  N  N  -15.566  39.120  -17.478  -5.828  -2.879   1.863  C6   9I7  10  
9I7  C1   C11  C  0  1  N  N  N  -12.845  44.433  -16.617  -5.069   1.312  -1.735  C1   9I7  11  
9I7  C2   C12  C  0  1  N  N  S  -12.892  42.961  -17.024  -4.428   0.046  -1.227  C2   9I7  12  
9I7  N7   N1   N  0  1  N  N  N  -15.672  39.147  -16.019  -4.457  -2.397   2.069  N7   9I7  13  
9I7  C8   C13  C  0  1  N  N  N  -14.699  39.863  -15.415  -3.898  -2.005   0.911  C8   9I7  14  
9I7  C15  C14  C  0  1  N  N  S   -9.653  37.955  -19.194   2.426   0.103  -0.629  C15  9I7  15  
9I7  C19  C15  C  0  1  N  N  N  -10.572  36.254  -20.805   1.806  -1.918  -1.962  C19  9I7  16  
9I7  C21  C16  C  0  1  N  N  N   -7.646  36.748  -18.482   4.738  -0.356  -0.011  C21  9I7  17  
9I7  C24  C17  C  0  1  N  N  N   -8.020  40.395  -19.742   0.350   2.284  -0.774  C24  9I7  18  
9I7  C25  C18  C  0  1  N  N  S   -7.594  41.848  -19.773  -0.344   3.332   0.127  C25  9I7  19  
9I7  C26  C19  C  0  1  N  N  N   -6.905  42.456  -18.565  -0.159   3.217   1.642  C26  9I7  20  
9I7  C27  C20  C  0  1  N  N  N   -6.087  43.705  -18.850  -0.449   4.462   2.484  C27  9I7  21  
9I7  C28  C21  C  0  1  N  N  N   -6.311  41.601  -17.458   0.980   2.330   2.148  C28  9I7  22  
9I7  C29  C22  C  0  1  N  N  R   -8.409  42.613  -18.746  -1.349   2.524   0.975  C29  9I7  23  
9I7  C32  C23  C  0  1  N  N  N   -7.042  35.796  -17.428   5.773  -1.147   0.747  C32  9I7  24  
9I7  F33  F1   F  0  1  N  N  N   -7.467  34.521  -17.558   5.524  -1.046   2.120  F33  9I7  25  
9I7  F34  F2   F  0  1  N  N  N   -5.698  35.798  -17.524   5.708  -2.490   0.359  F34  9I7  26  
9I7  F35  F3   F  0  1  N  N  N   -7.369  36.219  -16.196   7.046  -0.641   0.465  F35  9I7  27  
9I7  N10  N2   N  0  1  N  N  N  -11.481  42.512  -17.117  -3.443   0.378  -0.195  N10  9I7  28  
9I7  N13  N3   N  0  1  N  N  N   -9.138  40.346  -18.771   0.198   1.004  -0.043  N13  9I7  29  
9I7  N20  N4   N  0  1  N  N  N   -8.949  37.008  -18.330   3.432  -0.667   0.108  N20  9I7  30  
9I7  N31  N5   N  0  1  N  N  N  -13.612  45.276  -17.198  -4.717   2.444  -1.255  N31  9I7  31  
9I7  O22  O1   O  0  1  N  N  N   -6.905  37.187  -19.365   5.080   0.561  -0.727  O22  9I7  32  
9I7  O23  O2   O  0  1  N  N  N  -10.625  39.293  -17.418   0.851  -0.952   0.777  O23  9I7  33  
9I7  O30  O3   O  0  1  N  N  N  -11.357  42.136  -19.343  -1.873   0.752  -1.718  O30  9I7  34  
9I7  O9   O4   O  0  1  N  N  N  -14.448  39.866  -14.201  -2.776  -1.558   0.797  O9   9I7  35  
9I7  H1   H1   H  0  1  N  N  N  -12.018  39.247  -19.821   1.620   1.389  -2.914  H1   9I7  36  
9I7  H2   H2   H  0  1  N  N  N  -11.077  38.892  -21.309   1.132  -0.064  -3.819  H2   9I7  37  
9I7  H3   H3   H  0  1  N  N  N  -12.630  38.041  -21.004   0.308   0.356  -2.298  H3   9I7  38  
9I7  H4   H4   H  0  1  N  N  N  -12.181  37.497  -17.992   3.976   0.622  -2.810  H4   9I7  39  
9I7  H5   H5   H  0  1  N  N  N  -12.794  36.321  -19.203   4.363  -1.003  -2.196  H5   9I7  40  
9I7  H6   H6   H  0  1  N  N  N  -11.359  35.914  -18.202   3.534  -0.818  -3.760  H6   9I7  41  
9I7  H7   H7   H  0  1  N  N  N   -9.111  41.532  -16.998  -1.268   0.382   1.362  H7   9I7  42  
9I7  H8   H8   H  0  1  N  N  N  -13.182  42.083  -15.079  -6.282  -1.041  -1.373  H8   9I7  43  
9I7  H9   H9   H  0  1  N  N  N  -14.695  42.585  -15.907  -5.937  -0.390   0.247  H9   9I7  44  
9I7  H10  H10  H  0  1  N  N  N  -12.964  40.188  -16.629  -4.372  -2.659  -1.084  H10  9I7  45  
9I7  H11  H11  H  0  1  N  N  N  -14.110  40.267  -18.638  -6.937  -2.894  -0.021  H11  9I7  46  
9I7  H12  H12  H  0  1  N  N  N  -15.456  41.249  -17.966  -5.706  -4.193   0.120  H12  9I7  47  
9I7  H13  H13  H  0  1  N  N  N  -16.559  39.147  -17.950  -6.545  -2.115   2.164  H13  9I7  48  
9I7  H14  H14  H  0  1  N  N  N  -15.020  38.229  -17.822  -5.994  -3.796   2.427  H14  9I7  49  
9I7  H15  H15  H  0  1  N  N  N  -12.167  44.760  -15.842  -5.826   1.263  -2.505  H15  9I7  50  
9I7  H16  H16  H  0  1  N  N  N  -13.358  42.889  -18.018  -3.932  -0.466  -2.052  H16  9I7  51  
9I7  H17  H17  H  0  1  N  N  N  -16.398  38.679  -15.515  -4.011  -2.365   2.930  H17  9I7  52  
9I7  H18  H18  H  0  1  N  N  N   -8.998  38.193  -20.045   2.737   1.146  -0.687  H18  9I7  53  
9I7  H19  H19  H  0  1  N  N  N  -10.029  35.450  -20.286   1.704  -2.323  -2.968  H19  9I7  54  
9I7  H20  H20  H  0  1  N  N  N  -11.478  35.842  -21.274   2.533  -2.508  -1.404  H20  9I7  55  
9I7  H21  H21  H  0  1  N  N  N   -9.925  36.692  -21.579   0.841  -1.956  -1.455  H21  9I7  56  
9I7  H22  H22  H  0  1  N  N  N   -8.357  40.069  -20.737  -0.144   2.229  -1.744  H22  9I7  57  
9I7  H23  H23  H  0  1  N  N  N   -7.190  39.755  -19.409   1.406   2.527  -0.898  H23  9I7  58  
9I7  H24  H24  H  0  1  N  N  N   -7.427  42.318  -20.754  -0.610   4.288  -0.323  H24  9I7  59  
9I7  H25  H25  H  0  1  N  N  N   -5.631  44.066  -17.916  -0.903   5.228   1.855  H25  9I7  60  
9I7  H26  H26  H  0  1  N  N  N   -5.296  43.467  -19.576  -1.133   4.202   3.292  H26  9I7  61  
9I7  H27  H27  H  0  1  N  N  N   -6.742  44.486  -19.264   0.482   4.842   2.903  H27  9I7  62  
9I7  H28  H28  H  0  1  N  N  N   -5.866  42.251  -16.690   1.749   2.953   2.606  H28  9I7  63  
9I7  H29  H29  H  0  1  N  N  N   -7.103  40.987  -17.004   0.594   1.628   2.886  H29  9I7  64  
9I7  H30  H30  H  0  1  N  N  N   -5.534  40.945  -17.878   1.410   1.778   1.312  H30  9I7  65  
9I7  H31  H31  H  0  1  N  N  N   -8.800  43.604  -19.021  -2.359   2.885   1.169  H31  9I7  66  
9I7  H32  H32  H  0  1  N  N  N  -10.967  42.497  -16.260  -3.694   0.352   0.741  H32  9I7  67  
9I7  H33  H33  H  0  1  N  N  N   -9.456  36.542  -17.605   3.158  -1.400   0.680  H33  9I7  68  
9I7  H34  H34  H  0  1  N  N  N  -13.487  46.203  -16.844  -5.130   3.259  -1.582  H34  9I7  69  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9I7  C19  C16  SING  N  N   1  
9I7  C18  C16  SING  N  N   2  
9I7  C16  C15  SING  N  N   3  
9I7  C16  C17  SING  N  N   4  
9I7  C25  C24  SING  N  N   5  
9I7  C25  C29  SING  N  N   6  
9I7  C25  C26  SING  N  N   7  
9I7  C24  N13  SING  N  N   8  
9I7  O22  C21  DOUB  N  N   9  
9I7  O30  C11  DOUB  N  N  10  
9I7  C15  C14  SING  N  N  11  
9I7  C15  N20  SING  N  N  12  
9I7  C27  C26  SING  N  N  13  
9I7  N13  C14  SING  N  N  14  
9I7  N13  C12  SING  N  N  15  
9I7  C29  C26  SING  N  N  16  
9I7  C29  C12  SING  N  N  17  
9I7  C26  C28  SING  N  N  18  
9I7  C21  N20  SING  N  N  19  
9I7  C21  C32  SING  N  N  20  
9I7  C14  O23  DOUB  N  N  21  
9I7  C11  C12  SING  N  N  22  
9I7  C11  N10  SING  N  N  23  
9I7  C5   C6   SING  N  N  24  
9I7  C5   C4   SING  N  N  25  
9I7  F33  C32  SING  N  N  26  
9I7  F34  C32  SING  N  N  27  
9I7  C6   N7   SING  N  N  28  
9I7  C32  F35  SING  N  N  29  
9I7  N31  C1   DOUB  N  N  30  
9I7  N10  C2   SING  N  N  31  
9I7  C2   C1   SING  N  N  32  
9I7  C2   C3   SING  N  N  33  
9I7  C4   C3   SING  N  N  34  
9I7  C4   C8   SING  N  N  35  
9I7  N7   C8   SING  N  N  36  
9I7  C8   O9   DOUB  N  N  37  
9I7  C18  H1   SING  N  N  38  
9I7  C18  H2   SING  N  N  39  
9I7  C18  H3   SING  N  N  40  
9I7  C17  H4   SING  N  N  41  
9I7  C17  H5   SING  N  N  42  
9I7  C17  H6   SING  N  N  43  
9I7  C12  H7   SING  N  N  44  
9I7  C3   H8   SING  N  N  45  
9I7  C3   H9   SING  N  N  46  
9I7  C4   H10  SING  N  N  47  
9I7  C5   H11  SING  N  N  48  
9I7  C5   H12  SING  N  N  49  
9I7  C6   H13  SING  N  N  50  
9I7  C6   H14  SING  N  N  51  
9I7  C1   H15  SING  N  N  52  
9I7  C2   H16  SING  N  N  53  
9I7  N7   H17  SING  N  N  54  
9I7  C15  H18  SING  N  N  55  
9I7  C19  H19  SING  N  N  56  
9I7  C19  H20  SING  N  N  57  
9I7  C19  H21  SING  N  N  58  
9I7  C24  H22  SING  N  N  59  
9I7  C24  H23  SING  N  N  60  
9I7  C25  H24  SING  N  N  61  
9I7  C27  H25  SING  N  N  62  
9I7  C27  H26  SING  N  N  63  
9I7  C27  H27  SING  N  N  64  
9I7  C28  H28  SING  N  N  65  
9I7  C28  H29  SING  N  N  66  
9I7  C28  H30  SING  N  N  67  
9I7  C29  H31  SING  N  N  68  
9I7  N10  H32  SING  N  N  69  
9I7  N20  H33  SING  N  N  70  
9I7  N31  H34  SING  N  N  71  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9I7  SMILES            ACDLabs               12.01  "CC1(C)C2C(C(=O)NC(C=N)CC3CCNC3=O)N(CC21)C(=O)C(NC(=O)C(F)(F)F)C(C)(C)C"  
9I7  InChI             InChI                 1.03   "InChI=1S/C23H34F3N5O4/c1-21(2,3)16(30-20(35)23(24,25)26)19(34)31-10-13-14(22(13,4)5)15(31)18(33)29-12(9-27)8-11-6-7-28-17(11)32/h9,11-16,27H,6-8,10H2,1-5H3,(H,28,32)(H,29,33)(H,30,35)/b27-9-/t11-,12-,13-,14-,15-,16+/m0/s1"  
9I7  InChIKey          InChI                 1.03   WDVIRQQKRMIXGS-UADFFXAFSA-N  
9I7  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(C)[C@H](NC(=O)C(F)(F)F)C(=O)N1C[C@H]2[C@@H]([C@H]1C(=O)N[C@@H](C[C@@H]3CCNC3=O)C=N)C2(C)C"  
9I7  SMILES            CACTVS                3.385  "CC(C)(C)[CH](NC(=O)C(F)(F)F)C(=O)N1C[CH]2[CH]([CH]1C(=O)N[CH](C[CH]3CCNC3=O)C=N)C2(C)C"  
9I7  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[H]/N=C\[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2[C@@H]3[C@@H](C3(C)C)CN2C(=O)[C@H](C(C)(C)C)NC(=O)C(F)(F)F"  
9I7  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(C2C1C(N(C2)C(=O)C(C(C)(C)C)NC(=O)C(F)(F)F)C(=O)NC(CC3CCNC3=O)C=N)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9I7  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1R,2S,5S)-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide"  
9I7  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(1~{R},2~{S},5~{S})-~{N}-[(2~{S})-1-azanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3-[(2~{S})-3,3-dimethyl-2-[2,2,2-tris(fluoranyl)ethanoylamino]butanoyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9I7  "Create component"    2021-10-13  RCSB  
9I7  "Initial release"     2021-10-20  RCSB  
9I7  "Obsolete component"  2021-12-15  RCSB  
9I7  "Other modification"  2022-02-08  RCSB  
##
