data_8W7
# 
_chem_comp.id                                    8W7 
_chem_comp.name                                  "(3S)-3-[4-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H27 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-03-08 
_chem_comp.pdbx_modified_date                    2017-04-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        449.499 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8W7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5V3O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8W7 C1  C1  C 0 1 Y N N 46.852 57.264 -37.745 -2.722 -4.259 0.219  C1  8W7 1  
8W7 C2  C2  C 0 1 Y N N 48.184 56.909 -37.929 -1.550 -3.526 0.213  C2  8W7 2  
8W7 C3  C3  C 0 1 Y N N 48.536 55.584 -38.181 -1.594 -2.140 0.125  C3  8W7 3  
8W7 C4  C4  C 0 1 Y N N 45.850 56.301 -37.811 -3.944 -3.622 0.133  C4  8W7 4  
8W7 C5  C5  C 0 1 Y N N 46.189 54.974 -38.067 -3.999 -2.230 0.044  C5  8W7 5  
8W7 C6  C6  C 0 1 Y N N 47.524 54.639 -38.246 -2.812 -1.495 0.044  C6  8W7 6  
8W7 N1  N1  N 0 1 N N N 46.215 52.745 -38.429 -4.674 -0.021 -0.110 N1  8W7 7  
8W7 N2  N2  N 0 1 N N N 46.751 49.123 -37.876 -4.018 3.082  -0.786 N2  8W7 8  
8W7 N3  N3  N 0 1 N N N 52.110 56.375 -31.640 6.500  0.772  0.222  N3  8W7 9  
8W7 O1  O1  O 0 1 N N N 44.215 53.752 -38.073 -6.301 -1.604 -0.081 O1  8W7 10 
8W7 C7  C7  C 0 1 N N N 47.624 53.143 -38.500 -3.208 -0.044 -0.060 C7  8W7 11 
8W7 C8  C8  C 0 1 N N N 45.439 53.803 -38.188 -5.128 -1.285 -0.058 C8  8W7 12 
8W7 C9  C9  C 0 1 N N S 45.746 51.361 -38.589 -5.506 1.181  -0.203 C9  8W7 13 
8W7 C10 C10 C 0 1 N N N 46.037 50.876 -40.006 -5.593 1.851  1.173  C10 8W7 14 
8W7 C11 C11 C 0 1 N N N 45.664 49.402 -40.156 -4.201 2.334  1.575  C11 8W7 15 
8W7 C12 C12 C 0 1 N N N 46.382 48.560 -39.103 -3.653 3.231  0.496  C12 8W7 16 
8W7 C13 C13 C 0 1 N N N 46.470 50.464 -37.579 -4.892 2.145  -1.184 C13 8W7 17 
8W7 C14 C14 C 0 1 N N N 50.815 56.111 -37.893 0.782  -2.155 0.206  C14 8W7 18 
8W7 C15 C15 C 0 1 Y N N 51.339 56.006 -36.606 1.946  -1.197 0.186  C15 8W7 19 
8W7 O2  O2  O 0 1 N N N 46.805 50.921 -36.488 -5.192 2.072  -2.356 O2  8W7 20 
8W7 C22 C16 C 0 1 N N N 52.218 55.738 -30.316 6.714  -0.049 -0.979 C22 8W7 21 
8W7 C23 C17 C 0 1 N N N 51.304 56.472 -29.328 8.004  -0.857 -0.814 C23 8W7 22 
8W7 O5  O3  O 0 1 N N N 51.619 57.881 -29.265 9.093  0.038  -0.569 O5  8W7 23 
8W7 C24 C18 C 0 1 N N N 51.523 58.492 -30.565 8.917  0.853  0.593  C24 8W7 24 
8W7 C25 C19 C 0 1 N N N 52.504 57.787 -31.504 7.636  1.678  0.443  C25 8W7 25 
8W7 C21 C20 C 0 1 N N N 52.979 55.688 -32.615 5.240  1.522  0.129  C21 8W7 26 
8W7 C20 C21 C 0 1 Y N N 52.396 55.795 -34.032 4.080  0.559  0.150  C20 8W7 27 
8W7 C19 C22 C 0 1 Y N N 52.255 54.660 -34.824 3.506  0.195  1.353  C19 8W7 28 
8W7 C17 C23 C 0 1 Y N N 51.728 54.763 -36.107 2.439  -0.684 1.371  C17 8W7 29 
8W7 C18 C24 C 0 1 Y N N 52.009 57.032 -34.539 3.590  0.042  -1.035 C18 8W7 30 
8W7 C16 C25 C 0 1 Y N N 51.482 57.146 -35.820 2.523  -0.836 -1.016 C16 8W7 31 
8W7 O4  O4  O 0 1 N N N 49.829 55.182 -38.371 -0.441 -1.421 0.119  O4  8W7 32 
8W7 O3  O5  O 0 1 N N N 46.639 47.381 -39.333 -2.867 4.104  0.793  O3  8W7 33 
8W7 H1  H1  H 0 1 N N N 46.594 58.294 -37.550 -2.682 -5.336 0.287  H1  8W7 34 
8W7 H2  H2  H 0 1 N N N 48.952 57.666 -37.876 -0.598 -4.032 0.276  H2  8W7 35 
8W7 H3  H3  H 0 1 N N N 44.817 56.580 -37.665 -4.856 -4.200 0.133  H3  8W7 36 
8W7 H4  H4  H 0 1 N N N 47.224 48.559 -37.199 -3.639 3.678  -1.451 H4  8W7 37 
8W7 H6  H6  H 0 1 N N N 48.223 52.642 -37.725 -2.855 0.497  0.819  H6  8W7 38 
8W7 H7  H7  H 0 1 N N N 48.053 52.930 -39.490 -2.795 0.401  -0.965 H7  8W7 39 
8W7 H8  H8  H 0 1 N N N 44.663 51.309 -38.405 -6.506 0.907  -0.539 H8  8W7 40 
8W7 H9  H9  H 0 1 N N N 47.109 51.001 -40.218 -6.269 2.705  1.122  H9  8W7 41 
8W7 H10 H10 H 0 1 N N N 45.450 51.472 -40.720 -5.963 1.135  1.906  H10 8W7 42 
8W7 H11 H11 H 0 1 N N N 44.577 49.289 -40.031 -4.264 2.882  2.515  H11 8W7 43 
8W7 H12 H12 H 0 1 N N N 45.956 49.055 -41.158 -3.539 1.477  1.695  H12 8W7 44 
8W7 H13 H13 H 0 1 N N N 51.668 56.044 -38.584 0.858  -2.836 -0.641 H13 8W7 45 
8W7 H14 H14 H 0 1 N N N 50.363 57.111 -37.965 0.798  -2.726 1.135  H14 8W7 46 
8W7 H15 H15 H 0 1 N N N 51.911 54.684 -30.388 5.873  -0.730 -1.109 H15 8W7 47 
8W7 H16 H16 H 0 1 N N N 53.259 55.793 -29.965 6.798  0.598  -1.852 H16 8W7 48 
8W7 H17 H17 H 0 1 N N N 50.259 56.353 -29.651 7.900  -1.542 0.027  H17 8W7 49 
8W7 H18 H18 H 0 1 N N N 51.431 56.032 -28.328 8.197  -1.423 -1.725 H18 8W7 50 
8W7 H19 H19 H 0 1 N N N 51.779 59.559 -30.494 8.840  0.217  1.475  H19 8W7 51 
8W7 H20 H20 H 0 1 N N N 50.498 58.386 -30.951 9.771  1.522  0.701  H20 8W7 52 
8W7 H21 H21 H 0 1 N N N 53.520 57.847 -31.088 7.735  2.352  -0.407 H21 8W7 53 
8W7 H22 H22 H 0 1 N N N 52.483 58.272 -32.491 7.469  2.257  1.351  H22 8W7 54 
8W7 H23 H23 H 0 1 N N N 53.063 54.627 -32.338 5.160  2.205  0.975  H23 8W7 55 
8W7 H24 H24 H 0 1 N N N 53.976 56.151 -32.599 5.223  2.091  -0.800 H24 8W7 56 
8W7 H25 H25 H 0 1 N N N 52.556 53.696 -34.441 3.888  0.599  2.279  H25 8W7 57 
8W7 H26 H26 H 0 1 N N N 51.620 53.879 -36.718 1.990  -0.969 2.312  H26 8W7 58 
8W7 H27 H27 H 0 1 N N N 52.120 57.916 -33.928 4.039  0.327  -1.975 H27 8W7 59 
8W7 H28 H28 H 0 1 N N N 51.186 58.112 -36.203 2.141  -1.241 -1.942 H28 8W7 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8W7 C11 C10 SING N N 1  
8W7 C11 C12 SING N N 2  
8W7 C10 C9  SING N N 3  
8W7 O3  C12 DOUB N N 4  
8W7 C12 N2  SING N N 5  
8W7 C9  N1  SING N N 6  
8W7 C9  C13 SING N N 7  
8W7 C7  N1  SING N N 8  
8W7 C7  C6  SING N N 9  
8W7 N1  C8  SING N N 10 
8W7 O4  C3  SING N N 11 
8W7 O4  C14 SING N N 12 
8W7 C6  C3  DOUB Y N 13 
8W7 C6  C5  SING Y N 14 
8W7 C8  O1  DOUB N N 15 
8W7 C8  C5  SING N N 16 
8W7 C3  C2  SING Y N 17 
8W7 C5  C4  DOUB Y N 18 
8W7 C2  C1  DOUB Y N 19 
8W7 C14 C15 SING N N 20 
8W7 N2  C13 SING N N 21 
8W7 C4  C1  SING Y N 22 
8W7 C13 O2  DOUB N N 23 
8W7 C15 C17 DOUB Y N 24 
8W7 C15 C16 SING Y N 25 
8W7 C17 C19 SING Y N 26 
8W7 C16 C18 DOUB Y N 27 
8W7 C19 C20 DOUB Y N 28 
8W7 C18 C20 SING Y N 29 
8W7 C20 C21 SING N N 30 
8W7 C21 N3  SING N N 31 
8W7 N3  C25 SING N N 32 
8W7 N3  C22 SING N N 33 
8W7 C25 C24 SING N N 34 
8W7 C24 O5  SING N N 35 
8W7 C22 C23 SING N N 36 
8W7 C23 O5  SING N N 37 
8W7 C1  H1  SING N N 38 
8W7 C2  H2  SING N N 39 
8W7 C4  H3  SING N N 40 
8W7 N2  H4  SING N N 41 
8W7 C7  H6  SING N N 42 
8W7 C7  H7  SING N N 43 
8W7 C9  H8  SING N N 44 
8W7 C10 H9  SING N N 45 
8W7 C10 H10 SING N N 46 
8W7 C11 H11 SING N N 47 
8W7 C11 H12 SING N N 48 
8W7 C14 H13 SING N N 49 
8W7 C14 H14 SING N N 50 
8W7 C22 H15 SING N N 51 
8W7 C22 H16 SING N N 52 
8W7 C23 H17 SING N N 53 
8W7 C23 H18 SING N N 54 
8W7 C24 H19 SING N N 55 
8W7 C24 H20 SING N N 56 
8W7 C25 H21 SING N N 57 
8W7 C25 H22 SING N N 58 
8W7 C21 H23 SING N N 59 
8W7 C21 H24 SING N N 60 
8W7 C19 H25 SING N N 61 
8W7 C17 H26 SING N N 62 
8W7 C18 H27 SING N N 63 
8W7 C16 H28 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8W7 SMILES           ACDLabs              12.01 "c1cc(c2c(c1)C(N(C2)C3C(NC(CC3)=O)=O)=O)OCc5ccc(CN4CCOCC4)cc5"                                                                                                          
8W7 InChI            InChI                1.03  "InChI=1S/C25H27N3O5/c29-23-9-8-21(24(30)26-23)28-15-20-19(25(28)31)2-1-3-22(20)33-16-18-6-4-17(5-7-18)14-27-10-12-32-13-11-27/h1-7,21H,8-16H2,(H,26,29,30)/t21-/m0/s1" 
8W7 InChIKey         InChI                1.03  IXZOHGPZAQLIBH-NRFANRHFSA-N                                                                                                                                             
8W7 SMILES_CANONICAL CACTVS               3.385 "O=C1CC[C@H](N2Cc3c(OCc4ccc(CN5CCOCC5)cc4)cccc3C2=O)C(=O)N1"                                                                                                            
8W7 SMILES           CACTVS               3.385 "O=C1CC[CH](N2Cc3c(OCc4ccc(CN5CCOCC5)cc4)cccc3C2=O)C(=O)N1"                                                                                                             
8W7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1cc2c(c(c1)OCc3ccc(cc3)CN4CCOCC4)CN(C2=O)[C@H]5CCC(=O)NC5=O"                                                                                                          
8W7 SMILES           "OpenEye OEToolkits" 2.0.6 "c1cc2c(c(c1)OCc3ccc(cc3)CN4CCOCC4)CN(C2=O)C5CCC(=O)NC5=O"                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8W7 "SYSTEMATIC NAME" ACDLabs              12.01 "(3S)-3-[4-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione"   
8W7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{S})-3-[7-[[4-(morpholin-4-ylmethyl)phenyl]methoxy]-3-oxidanylidene-1~{H}-isoindol-2-yl]piperidine-2,6-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8W7 "Create component" 2017-03-08 RCSB 
8W7 "Initial release"  2017-05-03 RCSB 
# 
