data_827
# 
_chem_comp.id                                    827 
_chem_comp.name                                  "(1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-2-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-glucopyranoside" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H38 N4 O10" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-12-15 
_chem_comp.pdbx_modified_date                    2017-10-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        482.526 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5U19 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
827 C13 C1  C 0 1 N N S -4.508 -18.085 17.724 -2.694 1.095  -0.266 C13 827 1  
827 C15 C2  C 0 1 N N R -2.295 -19.122 17.570 -4.652 -0.182 -0.804 C15 827 2  
827 C20 C3  C 0 1 N N R -2.717 -17.441 19.328 -4.827 1.610  0.925  C20 827 3  
827 C22 C4  C 0 1 N N R -4.168 -17.617 19.138 -3.535 2.210  0.361  C22 827 4  
827 C24 C5  C 0 1 N N S -4.759 -17.553 14.503 -1.494 -2.091 1.096  C24 827 5  
827 C02 C6  C 0 1 N N R -7.280 -10.804 16.128 4.641  1.422  -1.204 C02 827 6  
827 C04 C7  C 0 1 N N N -7.485 -12.281 16.570 3.281  0.925  -1.703 C04 827 7  
827 C06 C8  C 0 1 N N R -7.538 -13.045 14.296 3.458  -1.088 -0.411 C06 827 8  
827 C11 C9  C 0 1 N N R -5.168 -16.933 15.819 -1.321 -0.776 0.332  C11 827 9  
827 O17 O1  O 0 1 N N N -2.214 -21.501 17.612 -4.557 -1.943 -2.457 O17 827 10 
827 C18 C10 C 0 1 N N S -2.016 -18.755 19.037 -5.571 0.882  -0.199 C18 827 11 
827 C27 C11 C 0 1 N N R -5.921 -15.688 13.239 0.967  -2.496 0.957  C27 827 12 
827 C09 C12 C 0 1 N N S -5.359 -15.430 15.693 0.060  -0.191 0.632  C09 827 13 
827 C31 C13 C 0 1 N N R -6.808 -10.639 14.742 4.900  0.857  0.196  C31 827 14 
827 C01 C14 C 0 1 N N N -6.298 -10.247 17.198 4.637  2.951  -1.148 C01 827 15 
827 C16 C15 C 0 1 N N N -1.547 -20.335 17.146 -5.367 -0.873 -1.967 C16 827 16 
827 O14 O2  O 0 1 N N N -3.734 -19.336 17.370 -3.457 0.439  -1.281 O14 827 17 
827 O12 O3  O 0 1 N N N -4.145 -17.136 16.811 -2.330 0.149  0.742  O12 827 18 
827 C26 C16 C 0 1 N N N -5.749 -17.190 13.393 -0.414 -3.082 0.658  C26 827 19 
827 C08 C17 C 0 1 N N S -6.306 -15.028 14.559 1.140  -1.182 0.193  C08 827 20 
827 O10 O4  O 0 1 N N N -5.843 -14.956 16.937 0.223  1.037  -0.081 O10 827 21 
827 O07 O5  O 0 1 N N N -6.251 -13.592 14.428 2.431  -0.635 0.474  O07 827 22 
827 C29 C18 C 0 1 N N R -7.437 -11.587 13.774 4.825  -0.672 0.139  C29 827 23 
827 O05 O6  O 0 1 N N N -8.217 -13.068 15.573 3.268  -0.504 -1.701 O05 827 24 
827 O03 O7  O 0 1 N N N -8.517 -10.156 16.293 5.666  0.979  -2.096 O03 827 25 
827 N32 N1  N 0 1 N N N -7.191 -9.313  14.156 6.234  1.269  0.652  N32 827 26 
827 C33 C19 C 0 1 N N N -6.321 -8.230  14.636 6.307  1.285  2.119  C33 827 27 
827 O30 O8  O 0 1 N N N -6.694 -11.560 12.575 4.994  -1.207 1.454  O30 827 28 
827 N28 N2  N 0 1 N N N -6.939 -15.448 12.207 2.004  -3.448 0.536  N28 827 29 
827 N25 N3  N 0 1 N N N -4.707 -18.986 14.644 -2.821 -2.653 0.808  N25 827 30 
827 N23 N4  N 0 1 N N N -4.883 -16.385 19.442 -2.776 2.847  1.446  N23 827 31 
827 O21 O9  O 0 1 N N N -2.444 -16.984 20.688 -5.651 2.654  1.447  O21 827 32 
827 O19 O10 O 0 1 N N N -0.598 -18.712 19.335 -6.742 0.256  0.331  O19 827 33 
827 H1  H1  H 0 1 N N N -5.585 -18.300 17.669 -1.794 1.522  -0.706 H1  827 34 
827 H2  H2  H 0 1 N N N -1.973 -18.277 16.944 -4.400 -0.920 -0.043 H2  827 35 
827 H3  H3  H 0 1 N N N -2.352 -16.688 18.614 -4.585 0.904  1.720  H3  827 36 
827 H4  H4  H 0 1 N N N -4.511 -18.396 19.834 -3.780 2.953  -0.398 H4  827 37 
827 H5  H5  H 0 1 N N N -3.766 -17.171 14.225 -1.403 -1.904 2.166  H5  827 38 
827 H6  H6  H 0 1 N N N -8.051 -12.292 17.513 2.495  1.296  -1.045 H6  827 39 
827 H7  H7  H 0 1 N N N -6.499 -12.742 16.729 3.110  1.289  -2.716 H7  827 40 
827 H8  H8  H 0 1 N N N -8.119 -13.627 13.565 3.414  -2.174 -0.493 H8  827 41 
827 H9  H9  H 0 1 N N N -6.113 -17.387 16.152 -1.412 -0.963 -0.738 H9  827 42 
827 H10 H10 H 0 1 N N N -1.732 -22.273 17.338 -4.949 -2.427 -3.196 H10 827 43 
827 H11 H11 H 0 1 N N N -2.482 -19.529 19.665 -5.857 1.598  -0.970 H11 827 44 
827 H12 H12 H 0 1 N N N -4.964 -15.261 12.905 1.058  -2.310 2.027  H12 827 45 
827 H13 H13 H 0 1 N N N -4.377 -14.979 15.488 0.152  -0.004 1.702  H13 827 46 
827 H14 H14 H 0 1 N N N -5.714 -10.751 14.706 4.146  1.234  0.886  H14 827 47 
827 H15 H15 H 0 1 N N N -6.719 -10.407 18.202 4.449  3.351  -2.144 H15 827 48 
827 H16 H16 H 0 1 N N N -5.333 -10.770 17.118 3.854  3.287  -0.468 H16 827 49 
827 H17 H17 H 0 1 N N N -6.146 -9.170  17.031 5.604  3.303  -0.791 H17 827 50 
827 H18 H18 H 0 1 N N N -1.488 -20.362 16.048 -6.323 -1.269 -1.622 H18 827 51 
827 H19 H19 H 0 1 N N N -0.531 -20.303 17.567 -5.541 -0.153 -2.766 H19 827 52 
827 H20 H20 H 0 1 N N N -6.726 -17.635 13.632 -0.538 -4.018 1.202  H20 827 53 
827 H21 H21 H 0 1 N N N -5.381 -17.603 12.442 -0.506 -3.269 -0.412 H21 827 54 
827 H22 H22 H 0 1 N N N -7.327 -15.340 14.826 1.049  -1.369 -0.877 H22 827 55 
827 H23 H23 H 0 1 N N N -5.245 -15.213 17.629 1.033  1.515  0.139  H23 827 56 
827 H24 H24 H 0 1 N N N -8.461 -11.239 13.572 5.611  -1.051 -0.513 H24 827 57 
827 H25 H25 H 0 1 N N N -8.816 -10.266 17.188 5.562  1.296  -3.003 H25 827 58 
827 H26 H26 H 0 1 N N N -8.135 -9.107  14.412 6.487  2.167  0.268  H26 827 59 
827 H28 H28 H 0 1 N N N -6.636 -7.278  14.183 5.572  1.987  2.512  H28 827 60 
827 H29 H29 H 0 1 N N N -6.396 -8.157  15.731 6.099  0.286  2.504  H29 827 61 
827 H30 H30 H 0 1 N N N -5.280 -8.444  14.353 7.306  1.593  2.430  H30 827 62 
827 H31 H31 H 0 1 N N N -6.635 -10.666 12.259 4.952  -2.172 1.494  H31 827 63 
827 H32 H32 H 0 1 N N N -7.069 -14.464 12.089 1.911  -4.325 1.027  H32 827 64 
827 H33 H33 H 0 1 N N N -6.638 -15.851 11.342 1.982  -3.588 -0.463 H33 827 65 
827 H35 H35 H 0 1 N N N -4.061 -19.227 15.368 -2.919 -3.572 1.212  H35 827 66 
827 H36 H36 H 0 1 N N N -5.616 -19.331 14.879 -3.552 -2.036 1.129  H36 827 67 
827 H38 H38 H 0 1 N N N -4.655 -16.086 20.369 -1.916 3.246  1.099  H38 827 68 
827 H39 H39 H 0 1 N N N -4.618 -15.676 18.789 -3.334 3.543  1.917  H39 827 69 
827 H41 H41 H 0 1 N N N -2.894 -16.162 20.843 -6.489 2.345  1.818  H41 827 70 
827 H42 H42 H 0 1 N N N -0.473 -18.482 20.248 -7.261 -0.228 -0.326 H42 827 71 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
827 N28 C27 SING N N 1  
827 O30 C29 SING N N 2  
827 C27 C26 SING N N 3  
827 C27 C08 SING N N 4  
827 C26 C24 SING N N 5  
827 C29 C06 SING N N 6  
827 C29 C31 SING N N 7  
827 N32 C33 SING N N 8  
827 N32 C31 SING N N 9  
827 C06 O07 SING N N 10 
827 C06 O05 SING N N 11 
827 O07 C08 SING N N 12 
827 C24 N25 SING N N 13 
827 C24 C11 SING N N 14 
827 C08 C09 SING N N 15 
827 C31 C02 SING N N 16 
827 O05 C04 SING N N 17 
827 C09 C11 SING N N 18 
827 C09 O10 SING N N 19 
827 C11 O12 SING N N 20 
827 C02 O03 SING N N 21 
827 C02 C04 SING N N 22 
827 C02 C01 SING N N 23 
827 O12 C13 SING N N 24 
827 C16 C15 SING N N 25 
827 C16 O17 SING N N 26 
827 O14 C15 SING N N 27 
827 O14 C13 SING N N 28 
827 C15 C18 SING N N 29 
827 C13 C22 SING N N 30 
827 C18 C20 SING N N 31 
827 C18 O19 SING N N 32 
827 C22 C20 SING N N 33 
827 C22 N23 SING N N 34 
827 C20 O21 SING N N 35 
827 C13 H1  SING N N 36 
827 C15 H2  SING N N 37 
827 C20 H3  SING N N 38 
827 C22 H4  SING N N 39 
827 C24 H5  SING N N 40 
827 C04 H6  SING N N 41 
827 C04 H7  SING N N 42 
827 C06 H8  SING N N 43 
827 C11 H9  SING N N 44 
827 O17 H10 SING N N 45 
827 C18 H11 SING N N 46 
827 C27 H12 SING N N 47 
827 C09 H13 SING N N 48 
827 C31 H14 SING N N 49 
827 C01 H15 SING N N 50 
827 C01 H16 SING N N 51 
827 C01 H17 SING N N 52 
827 C16 H18 SING N N 53 
827 C16 H19 SING N N 54 
827 C26 H20 SING N N 55 
827 C26 H21 SING N N 56 
827 C08 H22 SING N N 57 
827 O10 H23 SING N N 58 
827 C29 H24 SING N N 59 
827 O03 H25 SING N N 60 
827 N32 H26 SING N N 61 
827 C33 H28 SING N N 62 
827 C33 H29 SING N N 63 
827 C33 H30 SING N N 64 
827 O30 H31 SING N N 65 
827 N28 H32 SING N N 66 
827 N28 H33 SING N N 67 
827 N25 H35 SING N N 68 
827 N25 H36 SING N N 69 
827 N23 H38 SING N N 70 
827 N23 H39 SING N N 71 
827 O21 H41 SING N N 72 
827 O19 H42 SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
827 SMILES           ACDLabs              12.01 "C1(C(C(O)C(C(CO)O1)O)N)OC2C(N)CC(C(C2O)OC3OCC(O)(C)C(C3O)NC)N" 
827 InChI            InChI                1.03  
"InChI=1S/C19H38N4O10/c1-19(29)5-30-18(13(28)16(19)23-2)33-15-7(21)3-6(20)14(12(15)27)32-17-9(22)11(26)10(25)8(4-24)31-17/h6-18,23-29H,3-5,20-22H2,1-2H3/t6-,7+,8+,9+,10+,11+,12-,13+,14+,15-,16+,17+,18+,19-/m0/s1" 
827 InChIKey         InChI                1.03  HFLKNINDVFJPQT-ZFAMMYHGSA-N 
827 SMILES_CANONICAL CACTVS               3.385 "CN[C@@H]1[C@@H](O)[C@H](OC[C@]1(C)O)O[C@H]2[C@H](N)C[C@H](N)[C@@H](O[C@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3N)[C@@H]2O" 
827 SMILES           CACTVS               3.385 "CN[CH]1[CH](O)[CH](OC[C]1(C)O)O[CH]2[CH](N)C[CH](N)[CH](O[CH]3O[CH](CO)[CH](O)[CH](O)[CH]3N)[CH]2O" 
827 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@]1(CO[C@@H]([C@@H]([C@H]1NC)O)O[C@H]2[C@@H](C[C@@H]([C@H]([C@@H]2O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)N)N)N)O" 
827 SMILES           "OpenEye OEToolkits" 2.0.6 "CC1(COC(C(C1NC)O)OC2C(CC(C(C2O)OC3C(C(C(C(O3)CO)O)O)N)N)N)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
827 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-2-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-glucopyranoside" 
827 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
"(2~{R},3~{R},4~{R},5~{R})-2-[(1~{S},2~{S},3~{R},4~{S},6~{R})-4,6-bis(azanyl)-3-[(2~{S},3~{R},4~{R},5~{S},6~{R})-3-azanyl-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-oxidanyl-cyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
827 "Create component"   2016-12-15 RCSB 
827 "Modify value order" 2017-08-18 RCSB 
827 "Initial release"    2017-11-01 RCSB 
# 
