data_6S7
#

_chem_comp.id                                   6S7
_chem_comp.name                                 "2-((5-(3,7-Diazabicyclo[3.3.1]nonan-3-yl)pyridin-3-yl)oxy)-N,N-dimethylethanamine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H26 N4 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2-[5-[(1~{R},5~{S})-3,7-diazabicyclo[3.3.1]nonan-3-yl]pyridin-3-yl]oxy-~{N},~{N}-dimethyl-ethanamine"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-06-13
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       290.404
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    6S7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5KE4
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6S7  C17  C1   C  0  1  N  N  N  2.375  30.245  134.912   5.590  -0.452  -1.469  C17  6S7   1  
6S7  N16  N1   N  0  1  N  N  N  1.669  29.755  133.740   5.191  -1.115  -0.220  N16  6S7   2  
6S7  C21  C2   C  0  1  N  N  N  7.123  25.595  127.507  -3.664  -2.188   0.536  C21  6S7   3  
6S7  C14  C3   C  0  1  N  N  N  2.242  27.675  132.654   3.862   0.789   0.558  C14  6S7   4  
6S7  C12  C4   C  0  1  Y  N  N  3.176  23.275  130.275  -0.751   2.158  -0.244  C12  6S7   5  
6S7  N11  N2   N  0  1  Y  N  N  2.477  23.002  131.390   0.426   2.750  -0.212  N11  6S7   6  
6S7  C10  C5   C  0  1  Y  N  N  2.079  23.977  132.216   1.534   2.082   0.043  C10  6S7   7  
6S7  C9   C6   C  0  1  Y  N  N  2.388  25.309  131.940   1.501   0.716   0.290  C9   6S7   8  
6S7  C8   C7   C  0  1  Y  N  N  3.106  25.631  130.799   0.280   0.054   0.265  C8   6S7   9  
6S7  C3   C8   C  0  1  N  N  S  4.764  24.222  126.484  -4.544   0.457  -0.243  C3   6S7  10  
6S7  C7   C9   C  0  1  Y  N  N  3.497  24.593  129.961  -0.868   0.795  -0.002  C7   6S7  11  
6S7  C4   C10  C  0  1  N  N  N  3.881  23.950  127.688  -3.178   1.143  -0.348  C4   6S7  12  
6S7  C2   C11  C  0  1  N  N  N  4.954  25.724  126.294  -4.593  -0.706  -1.241  C2   6S7  13  
6S7  C18  C12  C  0  1  N  N  N  1.249  30.645  132.660   6.149  -2.166   0.147  C18  6S7  14  
6S7  C15  C13  C  0  1  N  N  N  1.317  28.353  133.660   5.037  -0.140   0.868  C15  6S7  15  
6S7  O13  O1   O  0  1  N  N  N  1.970  26.278  132.810   2.648   0.036   0.551  O13  6S7  16  
6S7  N5   N3   N  0  1  N  N  N  4.186  24.869  128.782  -2.119   0.174  -0.037  N5   6S7  17  
6S7  C6   C14  C  0  1  N  N  N  5.040  26.058  128.762  -2.125  -0.947  -0.986  C6   6S7  18  
6S7  C19  C15  C  0  1  N  N  N  6.099  23.506  126.680  -4.719  -0.099   1.174  C19  6S7  19  
6S7  N20  N4   N  0  1  N  N  N  6.885  24.169  127.695  -3.638  -1.049   1.463  N20  6S7  20  
6S7  C1   C16  C  0  1  N  N  R  5.766  26.284  127.442  -3.464  -1.685  -0.897  C1   6S7  21  
6S7  H1   H1   H  0  1  N  N  N  2.590  29.405  135.589   5.628  -1.186  -2.273  H1   6S7  22  
6S7  H2   H2   H  0  1  N  N  N  3.319  30.716  134.601   4.864   0.322  -1.717  H2   6S7  23  
6S7  H3   H3   H  0  1  N  N  N  1.750  30.985  135.433   6.574  -0.000  -1.342  H3   6S7  24  
6S7  H5   H5   H  0  1  N  N  N  7.674  25.763  126.570  -2.865  -2.884   0.792  H5   6S7  25  
6S7  H6   H6   H  0  1  N  N  N  7.705  25.993  128.351  -4.626  -2.695   0.611  H6   6S7  26  
6S7  H7   H7   H  0  1  N  N  N  3.295  27.895  132.883   3.803   1.567   1.319  H7   6S7  27  
6S7  H8   H8   H  0  1  N  N  N  2.013  28.005  131.630   4.010   1.248  -0.420  H8   6S7  28  
6S7  H9   H9   H  0  1  N  N  N  3.488  22.473  129.623  -1.635   2.740  -0.457  H9   6S7  29  
6S7  H10  H10  H  0  1  N  N  N  1.514  23.731  133.103   2.479   2.604   0.060  H10  6S7  30  
6S7  H11  H11  H  0  1  N  N  N  3.354  26.656  130.568   0.222  -1.008   0.453  H11  6S7  31  
6S7  H12  H12  H  0  1  N  N  N  4.275  23.813  125.587  -5.335   1.177  -0.456  H12  6S7  32  
6S7  H13  H13  H  0  1  N  N  N  2.828  24.075  127.397  -3.039   1.521  -1.360  H13  6S7  33  
6S7  H14  H14  H  0  1  N  N  N  4.047  22.918  128.029  -3.132   1.971   0.359  H14  6S7  34  
6S7  H15  H15  H  0  1  N  N  N  5.483  25.909  125.347  -5.554  -1.214  -1.166  H15  6S7  35  
6S7  H16  H16  H  0  1  N  N  N  3.971  26.217  126.267  -4.455  -0.327  -2.253  H16  6S7  36  
6S7  H17  H17  H  0  1  N  N  N  1.593  31.668  132.872   7.120  -1.717   0.354  H17  6S7  37  
6S7  H18  H18  H  0  1  N  N  N  1.685  30.301  131.711   5.794  -2.687   1.036  H18  6S7  38  
6S7  H19  H19  H  0  1  N  N  N  0.152  30.636  132.584   6.244  -2.875  -0.675  H19  6S7  39  
6S7  H20  H20  H  0  1  N  N  N  0.273  28.251  133.330   4.847  -0.666   1.804  H20  6S7  40  
6S7  H21  H21  H  0  1  N  N  N  1.437  27.884  134.648   5.951   0.448   0.961  H21  6S7  41  
6S7  H22  H22  H  0  1  N  N  N  5.794  25.955  129.557  -1.986  -0.567  -1.998  H22  6S7  42  
6S7  H23  H23  H  0  1  N  N  N  4.411  26.938  128.965  -1.314  -1.633  -0.741  H23  6S7  43  
6S7  H24  H24  H  0  1  N  N  N  5.911  22.467  126.989  -4.684   0.720   1.892  H24  6S7  44  
6S7  H25  H25  H  0  1  N  N  N  6.655  23.511  125.731  -5.680  -0.608   1.249  H25  6S7  45  
6S7  H26  H26  H  0  1  N  N  N  6.413  24.053  128.569  -2.739  -0.591   1.447  H26  6S7  46  
6S7  H28  H28  H  0  1  N  N  N  5.915  27.363  127.291  -3.483  -2.527  -1.589  H28  6S7  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6S7  C2   C3   SING  N  N   1  
6S7  C2   C1   SING  N  N   2  
6S7  C3   C19  SING  N  N   3  
6S7  C3   C4   SING  N  N   4  
6S7  C19  N20  SING  N  N   5  
6S7  C1   C21  SING  N  N   6  
6S7  C1   C6   SING  N  N   7  
6S7  C21  N20  SING  N  N   8  
6S7  C4   N5   SING  N  N   9  
6S7  C6   N5   SING  N  N  10  
6S7  N5   C7   SING  N  N  11  
6S7  C7   C12  DOUB  Y  N  12  
6S7  C7   C8   SING  Y  N  13  
6S7  C12  N11  SING  Y  N  14  
6S7  C8   C9   DOUB  Y  N  15  
6S7  N11  C10  DOUB  Y  N  16  
6S7  C9   C10  SING  Y  N  17  
6S7  C9   O13  SING  N  N  18  
6S7  C14  O13  SING  N  N  19  
6S7  C14  C15  SING  N  N  20  
6S7  C18  N16  SING  N  N  21  
6S7  C15  N16  SING  N  N  22  
6S7  N16  C17  SING  N  N  23  
6S7  C17  H1   SING  N  N  24  
6S7  C17  H2   SING  N  N  25  
6S7  C17  H3   SING  N  N  26  
6S7  C21  H5   SING  N  N  27  
6S7  C21  H6   SING  N  N  28  
6S7  C14  H7   SING  N  N  29  
6S7  C14  H8   SING  N  N  30  
6S7  C12  H9   SING  N  N  31  
6S7  C10  H10  SING  N  N  32  
6S7  C8   H11  SING  N  N  33  
6S7  C3   H12  SING  N  N  34  
6S7  C4   H13  SING  N  N  35  
6S7  C4   H14  SING  N  N  36  
6S7  C2   H15  SING  N  N  37  
6S7  C2   H16  SING  N  N  38  
6S7  C18  H17  SING  N  N  39  
6S7  C18  H18  SING  N  N  40  
6S7  C18  H19  SING  N  N  41  
6S7  C15  H20  SING  N  N  42  
6S7  C15  H21  SING  N  N  43  
6S7  C6   H22  SING  N  N  44  
6S7  C6   H23  SING  N  N  45  
6S7  C19  H24  SING  N  N  46  
6S7  C19  H25  SING  N  N  47  
6S7  N20  H26  SING  N  N  48  
6S7  C1   H28  SING  N  N  49  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6S7  InChI             InChI                 1.03   "InChI=1S/C16H26N4O/c1-19(2)3-4-21-16-6-15(9-18-10-16)20-11-13-5-14(12-20)8-17-7-13/h6,9-10,13-14,17H,3-5,7-8,11-12H2,1-2H3/t13-,14+"  
6S7  InChIKey          InChI                 1.03   YXMGPQOPWMCEQM-OKILXGFUSA-N  
6S7  SMILES_CANONICAL  CACTVS                3.385  "CN(C)CCOc1cncc(c1)N2C[C@H]3CNC[C@H](C3)C2"  
6S7  SMILES            CACTVS                3.385  "CN(C)CCOc1cncc(c1)N2C[CH]3CNC[CH](C3)C2"  
6S7  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.5  "CN(C)CCOc1cc(cnc1)N2C[C@@H]3C[C@H](C2)CNC3"  
6S7  SMILES            "OpenEye OEToolkits"  2.0.5  "CN(C)CCOc1cc(cnc1)N2CC3CC(C2)CNC3"  
#
_pdbx_chem_comp_identifier.comp_id          6S7
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.5
_pdbx_chem_comp_identifier.identifier       "2-[5-[(1~{R},5~{S})-3,7-diazabicyclo[3.3.1]nonan-3-yl]pyridin-3-yl]oxy-~{N},~{N}-dimethyl-ethanamine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6S7  "Create component"  2016-06-13  RCSB  
6S7  "Initial release"   2016-07-06  RCSB  
6S7  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     6S7
_pdbx_chem_comp_synonyms.name        "2-[5-[(1~{R},5~{S})-3,7-diazabicyclo[3.3.1]nonan-3-yl]pyridin-3-yl]oxy-~{N},~{N}-dimethyl-ethanamine"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
