data_Z16
#

_chem_comp.id                                   Z16
_chem_comp.name                                 "(1S)-1,5-anhydro-1-(3-chloro-2,5-dihydroxyphenyl)-D-glucitol"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C12 H15 Cl O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2010-07-01
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       306.696
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Z16
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3NP7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Z16  C1A   C1      C   0  1  Y  N  N  33.977  24.001  30.260   1.933  -0.460  -0.516  C1A   Z16   1  
Z16  O1    O1      O   0  1  N  N  N  32.628  24.035  30.443   1.722  -1.568  -1.275  O1    Z16   2  
Z16  C2A   C2      C   0  1  Y  N  N  34.530  23.495  29.079   0.855   0.273  -0.044  C2A   Z16   3  
Z16  C3A   C3      C   0  1  Y  N  N  35.918  23.469  28.932   1.069   1.399   0.728  C3A   Z16   4  
Z16  C4A   C4      C   0  1  Y  N  N  36.739  23.956  29.949   2.363   1.797   1.030  C4A   Z16   5  
Z16  O4A   O4      O   0  1  N  N  N  38.087  23.936  29.806   2.573   2.906   1.789  O4A   Z16   6  
Z16  C5A   C5      C   0  1  Y  N  N  36.185  24.457  31.122   3.442   1.064   0.559  C5A   Z16   7  
Z16  C6A   C6      C   0  1  Y  N  N  34.804  24.479  31.275   3.228  -0.065  -0.209  C6A   Z16   8  
Z16  CL6   CL6     CL  0  1  N  N  N  34.113  25.094  32.734   4.578  -0.986  -0.794  CL6   Z16   9  
Z16  C1    "C1'"   C   0  1  N  N  S  33.606  22.954  27.975  -0.551  -0.159  -0.372  C1    Z16  10  
Z16  C2    "C2'"   C   0  1  N  N  R  34.113  23.079  26.526  -1.012  -1.210   0.641  C2    Z16  11  
Z16  O2    "O2'"   O   0  1  N  N  N  34.407  24.446  26.229  -0.176  -2.365   0.544  O2    Z16  12  
Z16  C3    "C3'"   C   0  1  N  N  R  33.057  22.522  25.553  -2.462  -1.600   0.337  C3    Z16  13  
Z16  O3    "O3'"   O   0  1  N  N  N  33.564  22.516  24.215  -2.924  -2.526   1.321  O3    Z16  14  
Z16  C4    "C4'"   C   0  1  N  N  S  32.619  21.100  25.951  -3.334  -0.341   0.368  C4    Z16  15  
Z16  O4    "O4'"   O   0  1  N  N  N  31.454  20.746  25.210  -4.676  -0.681   0.014  O4    Z16  16  
Z16  C5    "C5'"   C   0  1  N  N  R  32.312  20.998  27.465  -2.784   0.677  -0.634  C5    Z16  17  
Z16  O5    "O5'"   O   0  1  N  N  N  33.410  21.529  28.248  -1.423   0.972  -0.313  O5    Z16  18  
Z16  C6    "C6'"   C   0  1  N  N  N  32.025  19.561  27.931  -3.614   1.960  -0.566  C6    Z16  19  
Z16  O6    "O6'"   O   0  1  N  N  N  33.095  18.691  27.546  -3.175   2.866  -1.581  O6    Z16  20  
Z16  HO1   HO1     H   0  1  N  N  N  32.433  24.407  31.295   1.639  -2.385  -0.764  HO1   Z16  21  
Z16  H3A   H3      H   0  1  N  N  N  36.357  23.071  28.029   0.229   1.970   1.094  H3A   Z16  22  
Z16  HO4A  HO4     H   0  0  N  N  N  38.494  24.301  30.583   2.616   2.730   2.739  HO4A  Z16  23  
Z16  H5A   H5      H   0  1  N  N  N  36.825  24.827  31.910   4.450   1.374   0.795  H5A   Z16  24  
Z16  H1    "H1'"   H   0  1  N  N  N  32.697  23.571  28.017  -0.576  -0.585  -1.375  H1    Z16  25  
Z16  H2    "H2'"   H   0  1  N  N  N  35.037  22.493  26.410  -0.949  -0.798   1.648  H2    Z16  26  
Z16  HO2   "HO2'"  H   0  1  N  Y  N  34.719  24.516  25.334  -0.411  -3.074   1.159  HO2   Z16  27  
Z16  H3    "H3'"   H   0  1  N  N  N  32.177  23.181  25.605  -2.517  -2.057  -0.651  H3    Z16  28  
Z16  HO3   "HO3'"  H   0  1  N  Y  N  32.903  22.170  23.627  -3.838  -2.816   1.190  HO3   Z16  29  
Z16  H4    "H4'"   H   0  1  N  N  N  33.446  20.411  25.725  -3.318   0.089   1.369  H4    Z16  30  
Z16  HO4   "HO4'"  H   0  1  N  Y  N  31.179  19.869  25.451  -5.087  -1.327   0.605  HO4   Z16  31  
Z16  H5    "H5'"   H   0  1  N  N  N  31.401  21.593  27.625  -2.838   0.262  -1.641  H5    Z16  32  
Z16  H61   "H6'"   H   0  1  N  N  N  31.925  19.549  29.026  -4.666   1.721  -0.723  H61   Z16  33  
Z16  H62   "H6'A"  H   0  1  N  N  N  31.090  19.211  27.469  -3.488   2.423   0.413  H62   Z16  34  
Z16  HO6   "HO6'"  H   0  1  N  Y  N  32.906  17.807  27.839  -3.658   3.703  -1.597  HO6   Z16  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Z16  C2A  C1A   DOUB  Y  N   1  
Z16  C1A  O1    SING  N  N   2  
Z16  C1A  C6A   SING  Y  N   3  
Z16  O1   HO1   SING  N  N   4  
Z16  C1   C2A   SING  N  N   5  
Z16  C3A  C2A   SING  Y  N   6  
Z16  C3A  C4A   DOUB  Y  N   7  
Z16  C3A  H3A   SING  N  N   8  
Z16  O4A  C4A   SING  N  N   9  
Z16  C4A  C5A   SING  Y  N  10  
Z16  O4A  HO4A  SING  N  N  11  
Z16  C5A  C6A   DOUB  Y  N  12  
Z16  C5A  H5A   SING  N  N  13  
Z16  C6A  CL6   SING  N  N  14  
Z16  C2   C1    SING  N  N  15  
Z16  C1   O5    SING  N  N  16  
Z16  C1   H1    SING  N  N  17  
Z16  C3   C2    SING  N  N  18  
Z16  O2   C2    SING  N  N  19  
Z16  C2   H2    SING  N  N  20  
Z16  O2   HO2   SING  N  N  21  
Z16  O3   C3    SING  N  N  22  
Z16  C3   C4    SING  N  N  23  
Z16  C3   H3    SING  N  N  24  
Z16  O3   HO3   SING  N  N  25  
Z16  O4   C4    SING  N  N  26  
Z16  C4   C5    SING  N  N  27  
Z16  C4   H4    SING  N  N  28  
Z16  O4   HO4   SING  N  N  29  
Z16  C5   C6    SING  N  N  30  
Z16  C5   O5    SING  N  N  31  
Z16  C5   H5    SING  N  N  32  
Z16  O6   C6    SING  N  N  33  
Z16  C6   H61   SING  N  N  34  
Z16  C6   H62   SING  N  N  35  
Z16  O6   HO6   SING  N  N  36  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Z16  SMILES            ACDLabs               12.01  "Clc1cc(O)cc(c1O)C2OC(CO)C(O)C(O)C2O"  
Z16  SMILES_CANONICAL  CACTVS                3.370  "OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)c2cc(O)cc(Cl)c2O"  
Z16  SMILES            CACTVS                3.370  "OC[CH]1O[CH]([CH](O)[CH](O)[CH]1O)c2cc(O)cc(Cl)c2O"  
Z16  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "c1c(cc(c(c1[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)Cl)O"  
Z16  SMILES            "OpenEye OEToolkits"  1.7.0  "c1c(cc(c(c1C2C(C(C(C(O2)CO)O)O)O)O)Cl)O"  
Z16  InChI             InChI                 1.03   "InChI=1S/C12H15ClO7/c13-6-2-4(15)1-5(8(6)16)12-11(19)10(18)9(17)7(3-14)20-12/h1-2,7,9-12,14-19H,3H2/t7-,9-,10+,11-,12+/m1/s1"  
Z16  InChIKey          InChI                 1.03   SCGLZDHCPHCUAO-URYVQPGZSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Z16  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S)-1,5-anhydro-1-(3-chloro-2,5-dihydroxyphenyl)-D-glucitol"  
Z16  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "(2S,3R,4R,5S,6R)-2-(3-chloro-2,5-dihydroxy-phenyl)-6-(hydroxymethyl)oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
Z16  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
Z16  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
Z16  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Z16  "Create component"          2010-07-01  RCSB  
Z16  "Modify aromatic_flag"      2011-06-04  RCSB  
Z16  "Modify descriptor"         2011-06-04  RCSB  
Z16  "Other modification"        2020-07-03  RCSB  
Z16  "Modify internal type"      2020-07-17  RCSB  
Z16  "Modify linking type"       2020-07-17  RCSB  
Z16  "Modify atom id"            2020-07-17  RCSB  
Z16  "Modify component atom id"  2020-07-17  RCSB  
Z16  "Modify leaving atom flag"  2020-07-17  RCSB  
##
