data_YY6
# 
_chem_comp.id                                    YY6 
_chem_comp.name                                  "7-(cyclohexylamino)-3-(2,6-dichloro-3,5-dimethoxyphenyl)-1-{(3S)-1-[(2E)-4-(dimethylamino)but-2-enoyl]pyrrolidin-3-yl}-3,4-dihydropyrimido[4,5-d]pyrimidin-2(1H)-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H39 Cl2 N7 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-02-03 
_chem_comp.pdbx_modified_date                    2019-01-11 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        632.581 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YY6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5UOM 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YY6 CAV C1  C  0 1 N N N -11.224 13.683 6.963  -3.299 6.255  -2.549 CAV YY6 1  
YY6 OAT O1  O  0 1 N N N -12.487 13.325 7.553  -2.428 5.122  -2.541 OAT YY6 2  
YY6 CAP C2  C  0 1 Y N N -12.419 12.666 8.756  -1.919 4.743  -1.339 CAP YY6 3  
YY6 CAQ C3  C  0 1 Y N N -13.618 12.641 9.446  -1.062 3.655  -1.262 CAQ YY6 4  
YY6 CLR CL1 CL 0 0 N N N -14.999 13.358 8.789  -0.641 2.777  -2.699 CLR YY6 5  
YY6 CAO C4  C  0 1 Y N N -11.279 12.039 9.301  -2.251 5.448  -0.192 CAO YY6 6  
YY6 CAN C5  C  0 1 Y N N -11.371 11.404 10.556 -1.731 5.063  1.034  CAN YY6 7  
YY6 OAU O2  O  0 1 N N N -10.349 10.756 11.210 -2.057 5.754  2.158  OAU YY6 8  
YY6 CAW C6  C  0 1 N N N -9.103  10.616 10.497 -2.941 6.867  2.001  CAW YY6 9  
YY6 CAM C7  C  0 1 Y N N -12.580 11.397 11.241 -0.878 3.972  1.115  CAM YY6 10 
YY6 CLS CL2 CL 0 0 N N N -12.662 10.618 12.778 -0.228 3.489  2.651  CLS YY6 11 
YY6 CAL C8  C  0 1 Y N N -13.702 12.009 10.676 -0.541 3.268  -0.034 CAL YY6 12 
YY6 NAI N1  N  0 1 N N N -14.965 12.088 11.353 0.324  2.169  0.046  NAI YY6 13 
YY6 CAH C9  C  0 1 N N N -15.902 11.139 11.298 -0.164 0.931  0.243  CAH YY6 14 
YY6 OAK O3  O  0 1 N N N -15.703 10.180 10.560 -1.367 0.793  0.350  OAK YY6 15 
YY6 CAJ C10 C  0 1 N N N -14.975 13.109 12.400 1.780  2.353  -0.091 CAJ YY6 16 
YY6 C5  C11 C  0 1 Y N N -16.208 13.228 13.008 2.630  1.110  0.008  C5  YY6 17 
YY6 C6  C12 C  0 1 Y N N -16.418 14.344 13.801 3.999  1.149  -0.102 C6  YY6 18 
YY6 N1  N2  N  0 1 Y N N -17.631 14.516 14.423 4.677  0.011  -0.003 N1  YY6 19 
YY6 C2  C13 C  0 1 Y N N -18.590 13.603 14.246 4.049  -1.138 0.198  C2  YY6 20 
YY6 NBC N3  N  0 1 N N N -19.841 13.810 14.930 4.795  -2.300 0.296  NBC YY6 21 
YY6 CBD C14 C  0 1 N N N -20.880 12.781 14.811 6.254  -2.247 0.176  CBD YY6 22 
YY6 CBE C15 C  0 1 N N N -21.717 13.183 13.725 6.646  -2.293 -1.302 CBE YY6 23 
YY6 CBF C16 C  0 1 N N N -22.699 12.041 13.483 8.170  -2.238 -1.427 CBF YY6 24 
YY6 CBG C17 C  0 1 N N N -23.736 12.084 14.636 8.785  -3.434 -0.698 CBG YY6 25 
YY6 CBH C18 C  0 1 N N N -23.065 12.075 16.026 8.393  -3.388 0.780  CBH YY6 26 
YY6 CBI C19 C  0 1 N N N -21.745 12.863 16.100 6.869  -3.444 0.905  CBI YY6 27 
YY6 N3  N4  N  0 1 Y N N -18.372 12.518 13.482 2.731  -1.210 0.310  N3  YY6 28 
YY6 C4  C20 C  0 1 Y N N -17.218 12.292 12.833 1.990  -0.112 0.220  C4  YY6 29 
YY6 NAG N5  N  0 1 N N N -17.003 11.159 12.083 0.611  -0.158 0.327  NAG YY6 30 
YY6 CAX C21 C  0 1 N N S -18.145 10.420 11.482 -0.030 -1.458 0.544  CAX YY6 31 
YY6 CBB C22 C  0 1 N N N -19.300 11.230 10.966 -1.151 -1.704 -0.496 CBB YY6 32 
YY6 CAY C23 C  0 1 N N N -18.711 9.555  12.582 -0.830 -1.468 1.873  CAY YY6 33 
YY6 CAZ C24 C  0 1 N N N -20.074 9.211  12.133 -1.916 -2.533 1.614  CAZ YY6 34 
YY6 NBA N6  N  0 1 N N N -20.438 10.259 11.137 -2.069 -2.655 0.156  NBA YY6 35 
YY6 CBJ C25 C  0 1 N N N -21.672 10.354 10.604 -2.908 -3.497 -0.478 CBJ YY6 36 
YY6 OBK O4  O  0 1 N N N -21.992 11.240 9.810  -2.951 -3.513 -1.693 OBK YY6 37 
YY6 CBL C26 C  0 1 N N N -22.669 9.248  11.051 -3.773 -4.398 0.300  CBL YY6 38 
YY6 CBM C27 C  0 1 N N N -24.112 9.164  10.552 -4.602 -5.229 -0.326 CBM YY6 39 
YY6 CBN C28 C  0 1 N N N -24.975 8.007  11.032 -5.488 -6.151 0.471  CBN YY6 40 
YY6 NBO N7  N  0 1 N N N -26.214 8.589  11.587 -6.888 -5.949 0.075  NBO YY6 41 
YY6 CBQ C29 C  0 1 N N N -26.037 9.001  12.993 -7.107 -6.369 -1.316 CBQ YY6 42 
YY6 CBP C30 C  0 1 N N N -27.343 7.643  11.480 -7.800 -6.652 0.987  CBP YY6 43 
YY6 H1  H1  H  0 1 N N N -11.398 14.202 6.009  -3.634 6.449  -3.568 H1  YY6 44 
YY6 H2  H2  H  0 1 N N N -10.675 14.347 7.647  -4.162 6.054  -1.915 H2  YY6 45 
YY6 H3  H3  H  0 1 N N N -10.633 12.773 6.782  -2.765 7.126  -2.169 H3  YY6 46 
YY6 H4  H4  H  0 1 N N N -10.344 12.045 8.761  -2.914 6.298  -0.254 H4  YY6 47 
YY6 H5  H5  H  0 1 N N N -8.376  10.084 11.128 -3.119 7.329  2.973  H5  YY6 48 
YY6 H6  H6  H  0 1 N N N -9.272  10.045 9.572  -2.490 7.597  1.329  H6  YY6 49 
YY6 H7  H7  H  0 1 N N N -8.710  11.612 10.246 -3.887 6.523  1.584  H7  YY6 50 
YY6 H8  H8  H  0 1 N N N -14.230 12.840 13.163 1.972  2.816  -1.059 H8  YY6 51 
YY6 H9  H9  H  0 1 N N N -14.707 14.077 11.952 2.106  3.048  0.682  H9  YY6 52 
YY6 H10 H10 H  0 1 N N N -15.633 15.075 13.930 4.513  2.085  -0.267 H10 YY6 53 
YY6 H11 H11 H  0 1 N N N -19.633 13.909 15.903 4.351  -3.150 0.443  H11 YY6 54 
YY6 H12 H12 H  0 1 N N N -20.459 11.773 14.680 6.621  -1.322 0.621  H12 YY6 55 
YY6 H13 H13 H  0 1 N N N -21.111 13.359 12.824 6.279  -3.218 -1.747 H13 YY6 56 
YY6 H14 H14 H  0 1 N N N -22.262 14.102 13.986 6.208  -1.441 -1.821 H14 YY6 57 
YY6 H15 H15 H  0 1 N N N -23.204 12.176 12.515 8.450  -2.271 -2.480 H15 YY6 58 
YY6 H16 H16 H  0 1 N N N -22.167 11.078 13.488 8.538  -1.313 -0.982 H16 YY6 59 
YY6 H17 H17 H  0 1 N N N -24.336 13.001 14.538 8.418  -4.359 -1.143 H17 YY6 60 
YY6 H18 H18 H  0 1 N N N -24.393 11.205 14.554 9.871  -3.395 -0.787 H18 YY6 61 
YY6 H19 H19 H  0 1 N N N -23.768 12.513 16.750 8.831  -4.240 1.299  H19 YY6 62 
YY6 H20 H20 H  0 1 N N N -22.858 11.030 16.301 8.760  -2.463 1.225  H20 YY6 63 
YY6 H21 H21 H  0 1 N N N -21.153 12.467 16.938 6.589  -3.411 1.958  H21 YY6 64 
YY6 H22 H22 H  0 1 N N N -21.984 13.920 16.288 6.501  -4.368 0.460  H22 YY6 65 
YY6 H23 H23 H  0 1 N N N -17.772 9.772  10.675 0.706  -2.262 0.524  H23 YY6 66 
YY6 H24 H24 H  0 1 N N N -19.160 11.505 9.910  -1.669 -0.772 -0.723 H24 YY6 67 
YY6 H25 H25 H  0 1 N N N -19.453 12.140 11.564 -0.736 -2.140 -1.405 H25 YY6 68 
YY6 H26 H26 H  0 1 N N N -18.105 8.646  12.710 -0.191 -1.764 2.705  H26 YY6 69 
YY6 H27 H27 H  0 1 N N N -18.745 10.110 13.531 -1.278 -0.493 2.061  H27 YY6 70 
YY6 H28 H28 H  0 1 N N N -20.774 9.226  12.981 -1.607 -3.489 2.036  H28 YY6 71 
YY6 H29 H29 H  0 1 N N N -20.086 8.215  11.666 -2.859 -2.217 2.062  H29 YY6 72 
YY6 H30 H30 H  0 1 N N N -22.325 8.500  11.750 -3.735 -4.384 1.380  H30 YY6 73 
YY6 H31 H31 H  0 1 N N N -24.508 9.907  9.876  -4.640 -5.242 -1.405 H31 YY6 74 
YY6 H32 H32 H  0 1 N N N -25.215 7.341  10.190 -5.202 -7.185 0.280  H32 YY6 75 
YY6 H33 H33 H  0 1 N N N -24.444 7.438  11.810 -5.377 -5.934 1.534  H33 YY6 76 
YY6 H35 H35 H  0 1 N N N -26.977 9.428  13.372 -6.864 -7.427 -1.418 H35 YY6 77 
YY6 H36 H36 H  0 1 N N N -25.762 8.126  13.600 -8.151 -6.209 -1.584 H36 YY6 78 
YY6 H37 H37 H  0 1 N N N -25.240 9.756  13.056 -6.468 -5.784 -1.977 H37 YY6 79 
YY6 H38 H38 H  0 1 N N N -28.249 8.104  11.900 -7.666 -6.272 1.999  H38 YY6 80 
YY6 H39 H39 H  0 1 N N N -27.515 7.395  10.422 -8.830 -6.485 0.670  H39 YY6 81 
YY6 H40 H40 H  0 1 N N N -27.106 6.725  12.038 -7.582 -7.720 0.967  H40 YY6 82 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YY6 CAV OAT SING N N 1  
YY6 OAT CAP SING N N 2  
YY6 CAP CAO DOUB Y N 3  
YY6 CAP CAQ SING Y N 4  
YY6 CLR CAQ SING N N 5  
YY6 CAO CAN SING Y N 6  
YY6 CAQ CAL DOUB Y N 7  
YY6 OBK CBJ DOUB N N 8  
YY6 CAW OAU SING N N 9  
YY6 CBM CBN SING N N 10 
YY6 CBM CBL DOUB N E 11 
YY6 CAN OAU SING N N 12 
YY6 CAN CAM DOUB Y N 13 
YY6 OAK CAH DOUB N N 14 
YY6 CBJ CBL SING N N 15 
YY6 CBJ NBA SING N N 16 
YY6 CAL CAM SING Y N 17 
YY6 CAL NAI SING N N 18 
YY6 CBB NBA SING N N 19 
YY6 CBB CAX SING N N 20 
YY6 CBN NBO SING N N 21 
YY6 NBA CAZ SING N N 22 
YY6 CAM CLS SING N N 23 
YY6 CAH NAI SING N N 24 
YY6 CAH NAG SING N N 25 
YY6 NAI CAJ SING N N 26 
YY6 CBP NBO SING N N 27 
YY6 CAX NAG SING N N 28 
YY6 CAX CAY SING N N 29 
YY6 NBO CBQ SING N N 30 
YY6 NAG C4  SING N N 31 
YY6 CAZ CAY SING N N 32 
YY6 CAJ C5  SING N N 33 
YY6 C4  C5  DOUB Y N 34 
YY6 C4  N3  SING Y N 35 
YY6 C5  C6  SING Y N 36 
YY6 N3  C2  DOUB Y N 37 
YY6 CBF CBE SING N N 38 
YY6 CBF CBG SING N N 39 
YY6 CBE CBD SING N N 40 
YY6 C6  N1  DOUB Y N 41 
YY6 C2  N1  SING Y N 42 
YY6 C2  NBC SING N N 43 
YY6 CBG CBH SING N N 44 
YY6 CBD NBC SING N N 45 
YY6 CBD CBI SING N N 46 
YY6 CBH CBI SING N N 47 
YY6 CAV H1  SING N N 48 
YY6 CAV H2  SING N N 49 
YY6 CAV H3  SING N N 50 
YY6 CAO H4  SING N N 51 
YY6 CAW H5  SING N N 52 
YY6 CAW H6  SING N N 53 
YY6 CAW H7  SING N N 54 
YY6 CAJ H8  SING N N 55 
YY6 CAJ H9  SING N N 56 
YY6 C6  H10 SING N N 57 
YY6 NBC H11 SING N N 58 
YY6 CBD H12 SING N N 59 
YY6 CBE H13 SING N N 60 
YY6 CBE H14 SING N N 61 
YY6 CBF H15 SING N N 62 
YY6 CBF H16 SING N N 63 
YY6 CBG H17 SING N N 64 
YY6 CBG H18 SING N N 65 
YY6 CBH H19 SING N N 66 
YY6 CBH H20 SING N N 67 
YY6 CBI H21 SING N N 68 
YY6 CBI H22 SING N N 69 
YY6 CAX H23 SING N N 70 
YY6 CBB H24 SING N N 71 
YY6 CBB H25 SING N N 72 
YY6 CAY H26 SING N N 73 
YY6 CAY H27 SING N N 74 
YY6 CAZ H28 SING N N 75 
YY6 CAZ H29 SING N N 76 
YY6 CBL H30 SING N N 77 
YY6 CBM H31 SING N N 78 
YY6 CBN H32 SING N N 79 
YY6 CBN H33 SING N N 80 
YY6 CBQ H35 SING N N 81 
YY6 CBQ H36 SING N N 82 
YY6 CBQ H37 SING N N 83 
YY6 CBP H38 SING N N 84 
YY6 CBP H39 SING N N 85 
YY6 CBP H40 SING N N 86 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YY6 SMILES           ACDLabs              12.01 "COc1cc(OC)c(Cl)c(c1Cl)N4Cc3cnc(NC2CCCCC2)nc3N(C4=O)C5CCN(C5)C([C@H]=CCN(C)C)=O" 
YY6 InChI            InChI                1.03  
"InChI=1S/C30H39Cl2N7O4/c1-36(2)13-8-11-24(40)37-14-12-21(18-37)39-28-19(16-33-29(35-28)34-20-9-6-5-7-10-20)17-38(30(39)41)27-25(31)22(42-3)15-23(43-4)26(27)32/h8,11,15-16,20-21H,5-7,9-10,12-14,17-18H2,1-4H3,(H,33,34,35)/b11-8+/t21-/m0/s1" 
YY6 InChIKey         InChI                1.03  DAHHYLCBKDFNAT-MAIVGLDJSA-N 
YY6 SMILES_CANONICAL CACTVS               3.385 "COc1cc(OC)c(Cl)c(N2Cc3cnc(NC4CCCCC4)nc3N([C@H]5CCN(C5)C(=O)/C=C/CN(C)C)C2=O)c1Cl" 
YY6 SMILES           CACTVS               3.385 "COc1cc(OC)c(Cl)c(N2Cc3cnc(NC4CCCCC4)nc3N([CH]5CCN(C5)C(=O)C=CCN(C)C)C2=O)c1Cl" 
YY6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN(C)C/C=C/C(=O)N1CC[C@@H](C1)N2c3c(cnc(n3)NC4CCCCC4)CN(C2=O)c5c(c(cc(c5Cl)OC)OC)Cl" 
YY6 SMILES           "OpenEye OEToolkits" 2.0.6 "CN(C)CC=CC(=O)N1CCC(C1)N2c3c(cnc(n3)NC4CCCCC4)CN(C2=O)c5c(c(cc(c5Cl)OC)OC)Cl" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YY6 "SYSTEMATIC NAME" ACDLabs              12.01 "7-(cyclohexylamino)-3-(2,6-dichloro-3,5-dimethoxyphenyl)-1-{(3S)-1-[(2E)-4-(dimethylamino)but-2-enoyl]pyrrolidin-3-yl}-3,4-dihydropyrimido[4,5-d]pyrimidin-2(1H)-one"    
YY6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-[2,6-bis(chloranyl)-3,5-dimethoxy-phenyl]-7-(cyclohexylamino)-1-[(3~{S})-1-[(~{E})-4-(dimethylamino)but-2-enoyl]pyrrolidin-3-yl]-4~{H}-pyrimido[4,5-d]pyrimidin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YY6 "Create component" 2017-02-03 RCSB 
YY6 "Initial release"  2019-01-16 RCSB 
# 
