data_YM6
# 
_chem_comp.id                                    YM6 
_chem_comp.name                                  "1-[(2R)-4-(9H-pyrido[4',3':4,5]pyrrolo[2,3-d]pyrimidin-4-yl)morpholin-2-yl]methanamine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H16 N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-06-06 
_chem_comp.pdbx_modified_date                    2023-09-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        284.316 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YM6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2YM6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YM6 N1   N1   N 0 1 Y N N 17.829 -0.476 9.612  -0.035 2.652  -0.109 N1   YM6 1  
YM6 C2   C2   C 0 1 Y N N 17.747 0.597  8.849  1.079  3.346  -0.251 C2   YM6 2  
YM6 N3   N3   N 0 1 Y N N 16.647 1.328  8.831  2.266  2.780  -0.285 N3   YM6 3  
YM6 C4   C4   C 0 1 Y N N 15.587 0.993  9.577  2.398  1.459  -0.175 C4   YM6 4  
YM6 C5   C5   C 0 1 Y N N 15.623 -0.152 10.362 1.238  0.681  -0.022 C5   YM6 5  
YM6 C6   C6   C 0 1 Y N N 16.828 -0.847 10.428 -0.005 1.327  0.008  C6   YM6 6  
YM6 NAA  NAA  N 0 1 N N N 18.418 -3.279 14.914 -4.146 -2.357 -0.764 NAA  YM6 7  
YM6 CAB  CAB  C 0 1 Y N N 12.499 -0.788 12.387 1.801  -3.089 0.277  CAB  YM6 8  
YM6 CAD  CAD  C 0 1 Y N N 13.799 -1.046 11.952 1.037  -1.943 0.228  CAD  YM6 9  
YM6 CAE  CAE  C 0 1 Y N N 12.360 1.092  11.060 3.769  -1.900 0.029  CAE  YM6 10 
YM6 CAF  CAF  C 0 1 N N N 18.292 -2.541 13.646 -2.934 -1.528 -0.815 CAF  YM6 11 
YM6 CAG  CAG  C 0 1 N N N 16.111 -3.753 12.621 -3.102 0.081  1.572  CAG  YM6 12 
YM6 CAH  CAH  C 0 1 N N N 15.927 -3.009 11.311 -1.847 0.945  1.419  CAH  YM6 13 
YM6 CAI  CAI  C 0 1 N N N 18.335 -2.699 11.122 -2.075 0.814  -0.987 CAI  YM6 14 
YM6 NAJ  NAJ  N 0 1 Y N N 11.825 0.260  11.941 3.118  -3.035 0.178  NAJ  YM6 15 
YM6 NAM  NAM  N 0 1 Y N N 14.395 1.575  9.721  3.486  0.621  -0.178 NAM  YM6 16 
YM6 OAN  OAN  O 0 1 N N N 17.359 -4.459 12.607 -3.950 0.275  0.437  OAN  YM6 17 
YM6 CAP  CAP  C 0 1 Y N N 13.647 0.887  10.582 3.083  -0.694 -0.031 CAP  YM6 18 
YM6 CAQ  CAQ  C 0 1 Y N N 14.393 -0.192 11.032 1.680  -0.715 0.072  CAQ  YM6 19 
YM6 CAT  CAT  C 0 1 N N R 18.430 -3.488 12.435 -3.327 -0.049 -0.809 CAT  YM6 20 
YM6 NAU  NAU  N 0 1 N N N 17.022 -2.047 11.108 -1.174 0.604  0.157  NAU  YM6 21 
YM6 H2   H2   H 0 1 N N N 18.588 0.881  8.233  1.012  4.420  -0.343 H2   YM6 22 
YM6 HNAA HNAA H 0 0 N N N 18.325 -2.644 15.681 -3.912 -3.339 -0.767 HNAA YM6 23 
YM6 HNAB HNAB H 0 0 N N N 17.701 -3.974 14.968 -4.712 -2.122 0.037  HNAB YM6 24 
YM6 HAB  HAB  H 0 1 N N N 12.035 -1.454 13.099 1.316  -4.047 0.398  HAB  YM6 25 
YM6 HAD  HAD  H 0 1 N N N 14.339 -1.903 12.327 -0.038 -1.995 0.309  HAD  YM6 26 
YM6 HAE  HAE  H 0 1 N N N 11.789 1.939  10.710 4.847  -1.906 -0.047 HAE  YM6 27 
YM6 HAF  HAF  H 0 1 N N N 17.306 -2.054 13.610 -2.311 -1.741 0.054  HAF  YM6 28 
YM6 HAFA HAFA H 0 0 N N N 19.081 -1.776 13.596 -2.377 -1.752 -1.725 HAFA YM6 29 
YM6 HAG  HAG  H 0 1 N N N 16.108 -3.034 13.453 -2.815 -0.969 1.637  HAG  YM6 30 
YM6 HAGA HAGA H 0 0 N N N 15.287 -4.470 12.753 -3.634 0.369  2.478  HAGA YM6 31 
YM6 HAH  HAH  H 0 1 N N N 15.921 -3.732 10.482 -2.129 1.997  1.408  HAH  YM6 32 
YM6 HAHA HAHA H 0 0 N N N 14.969 -2.468 11.333 -1.173 0.758  2.254  HAHA YM6 33 
YM6 HAI  HAI  H 0 1 N N N 18.427 -3.381 10.264 -1.566 0.530  -1.908 HAI  YM6 34 
YM6 HAIA HAIA H 0 0 N N N 19.133 -1.943 11.077 -2.361 1.864  -1.038 HAIA YM6 35 
YM6 HAT  HAT  H 0 1 N N N 19.408 -3.990 12.483 -4.022 0.146  -1.626 HAT  YM6 36 
YM6 HNAM HNAM H 0 0 N N N 14.105 2.408  9.250  4.407  0.911  -0.270 HNAM YM6 37 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YM6 C2  N1   DOUB Y N 1  
YM6 N1  C6   SING Y N 2  
YM6 N3  C2   SING Y N 3  
YM6 C2  H2   SING N N 4  
YM6 N3  C4   DOUB Y N 5  
YM6 C4  NAM  SING Y N 6  
YM6 C4  C5   SING Y N 7  
YM6 C5  C6   DOUB Y N 8  
YM6 C5  CAQ  SING Y N 9  
YM6 C6  NAU  SING N N 10 
YM6 CAF NAA  SING N N 11 
YM6 NAA HNAA SING N N 12 
YM6 NAA HNAB SING N N 13 
YM6 NAJ CAB  SING Y N 14 
YM6 CAD CAB  DOUB Y N 15 
YM6 CAB HAB  SING N N 16 
YM6 CAQ CAD  SING Y N 17 
YM6 CAD HAD  SING N N 18 
YM6 CAP CAE  SING Y N 19 
YM6 CAE NAJ  DOUB Y N 20 
YM6 CAE HAE  SING N N 21 
YM6 CAT CAF  SING N N 22 
YM6 CAF HAF  SING N N 23 
YM6 CAF HAFA SING N N 24 
YM6 CAH CAG  SING N N 25 
YM6 OAN CAG  SING N N 26 
YM6 CAG HAG  SING N N 27 
YM6 CAG HAGA SING N N 28 
YM6 NAU CAH  SING N N 29 
YM6 CAH HAH  SING N N 30 
YM6 CAH HAHA SING N N 31 
YM6 NAU CAI  SING N N 32 
YM6 CAI CAT  SING N N 33 
YM6 CAI HAI  SING N N 34 
YM6 CAI HAIA SING N N 35 
YM6 NAM CAP  SING Y N 36 
YM6 CAT OAN  SING N N 37 
YM6 CAP CAQ  DOUB Y N 38 
YM6 CAT HAT  SING N N 39 
YM6 NAM HNAM SING N N 40 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YM6 InChI            InChI                1.06  "InChI=1S/C14H16N6O/c15-5-9-7-20(3-4-21-9)14-12-10-1-2-16-6-11(10)19-13(12)17-8-18-14/h1-2,6,8-9H,3-5,7,15H2,(H,17,18,19)/t9-/m1/s1" 
YM6 InChIKey         InChI                1.06  ZOMFTMSIQWYIQV-SECBINFHSA-N                                                                                                          
YM6 SMILES_CANONICAL CACTVS               3.385 "NC[C@@H]1CN(CCO1)c2ncnc3[nH]c4cnccc4c23"                                                                                            
YM6 SMILES           CACTVS               3.385 "NC[CH]1CN(CCO1)c2ncnc3[nH]c4cnccc4c23"                                                                                              
YM6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cncc2c1c3c([nH]2)ncnc3N4CCO[C@@H](C4)CN"                                                                                          
YM6 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cncc2c1c3c([nH]2)ncnc3N4CCOC(C4)CN"                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           YM6 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{R})-4-(4,6,8,11-tetrazatricyclo[7.4.0.0^{2,7}]trideca-1(9),2,4,6,10,12-hexaen-3-yl)morpholin-2-yl]methanamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YM6 "Create component"   2011-06-06 EBI  
YM6 "Modify name"        2011-06-08 EBI  
YM6 "Other modification" 2011-06-08 EBI  
YM6 "Modify descriptor"  2023-09-23 RCSB 
# 
