data_WZ6
#

_chem_comp.id                                   WZ6
_chem_comp.name                                 "1-[3-(2-ethoxyethoxy)-5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl]-2-(trifluoromethyl)benzimidazole-5-carboxylic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H31 F3 N2 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-06-30
_chem_comp.pdbx_modified_date                   2021-01-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       504.541
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    WZ6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7CFO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
WZ6  F2   F1   F  0  1  N  N  N  -0.748  32.917  31.051   1.099  -1.130   3.930  F2   WZ6   1  
WZ6  C8   C1   C  0  1  N  N  N  -0.993  31.648  30.761   0.391  -0.979   2.733  C8   WZ6   2  
WZ6  F    F2   F  0  1  N  N  N  -1.295  31.867  29.519   0.109  -2.239   2.195  F    WZ6   3  
WZ6  F1   F3   F  0  1  N  N  N  -1.956  31.644  31.610  -0.807  -0.300   2.982  F1   WZ6   4  
WZ6  C    C2   C  0  1  Y  N  N   0.281  30.940  31.156   1.222  -0.189   1.755  C    WZ6   5  
WZ6  N1   N1   N  0  1  Y  N  N   0.588  29.812  30.442   2.498   0.035   1.872  N1   WZ6   6  
WZ6  C2   C3   C  0  1  Y  N  N   1.739  29.337  31.030   2.929   0.777   0.818  C2   WZ6   7  
WZ6  C3   C4   C  0  1  Y  N  N   2.560  28.252  30.756   4.171   1.290   0.451  C3   WZ6   8  
WZ6  C4   C5   C  0  1  Y  N  N   3.694  28.022  31.564   4.287   2.032  -0.721  C4   WZ6   9  
WZ6  C7   C6   C  0  1  N  N  N   4.544  26.813  31.237   5.598   2.579  -1.119  C7   WZ6  10  
WZ6  O1   O1   O  0  1  N  N  N   5.618  26.494  31.928   5.713   3.298  -2.253  O1   WZ6  11  
WZ6  O    O2   O  0  1  N  N  N   4.242  26.113  30.308   6.575   2.381  -0.424  O    WZ6  12  
WZ6  C5   C7   C  0  1  Y  N  N   4.032  28.852  32.651   3.162   2.261  -1.525  C5   WZ6  13  
WZ6  C6   C8   C  0  1  Y  N  N   3.249  29.958  32.982   1.944   1.761  -1.167  C6   WZ6  14  
WZ6  C1   C9   C  0  1  Y  N  N   2.115  30.231  32.198   1.809   1.018  -0.000  C1   WZ6  15  
WZ6  N    N2   N  0  1  Y  N  N   1.157  31.170  32.197   0.747   0.389   0.615  N    WZ6  16  
WZ6  C10  C10  C  0  1  Y  N  N   1.180  32.140  33.150  -0.578   0.354   0.156  C10  WZ6  17  
WZ6  C11  C11  C  0  1  Y  N  N   0.466  31.990  34.461  -1.001  -0.673  -0.685  C11  WZ6  18  
WZ6  O2   O3   O  0  1  N  N  N  -0.315  30.897  34.756  -0.133  -1.649  -1.063  O2   WZ6  19  
WZ6  C23  C12  C  0  1  N  N  N  -1.615  30.887  34.110  -0.639  -2.668  -1.927  C23  WZ6  20  
WZ6  C24  C13  C  0  1  N  N  N  -2.914  30.799  34.949   0.474  -3.670  -2.241  C24  WZ6  21  
WZ6  O3   O4   O  0  1  N  N  N  -4.093  31.320  34.242   0.858  -4.346  -1.043  O3   WZ6  22  
WZ6  C25  C14  C  0  1  N  N  N  -4.696  30.533  33.179   1.898  -5.309  -1.227  C25  WZ6  23  
WZ6  C26  C15  C  0  1  N  N  N  -5.898  31.167  32.481   2.227  -5.968   0.115  C26  WZ6  24  
WZ6  C12  C16  C  0  1  Y  N  N   0.474  32.986  35.416  -2.309  -0.694  -1.133  C12  WZ6  25  
WZ6  C13  C17  C  0  1  Y  N  N   1.168  34.169  35.246  -3.203   0.298  -0.750  C13  WZ6  26  
WZ6  C14  C18  C  0  1  N  N  N   1.189  35.192  36.347  -4.610   0.214  -1.283  C14  WZ6  27  
WZ6  C21  C19  C  0  1  N  N  N   0.153  35.211  37.453  -5.087  -1.239  -1.221  C21  WZ6  28  
WZ6  C22  C20  C  0  1  N  N  N   0.216  36.143  35.551  -4.628   0.688  -2.737  C22  WZ6  29  
WZ6  C15  C21  C  0  1  N  N  N   2.384  36.132  36.406  -5.551   1.088  -0.456  C15  WZ6  30  
WZ6  C16  C22  C  0  1  N  N  N   3.003  36.581  35.081  -4.940   2.491  -0.353  C16  WZ6  31  
WZ6  C17  C23  C  0  1  N  N  N   2.661  35.691  33.871  -3.706   2.414   0.543  C17  WZ6  32  
WZ6  C20  C24  C  0  1  N  N  N   3.970  34.899  34.119  -4.143   2.139   1.983  C20  WZ6  33  
WZ6  C19  C25  C  0  1  N  N  N   3.093  36.196  32.488  -2.960   3.749   0.488  C19  WZ6  34  
WZ6  C18  C26  C  0  1  Y  N  N   1.935  34.355  34.009  -2.786   1.312   0.084  C18  WZ6  35  
WZ6  C9   C27  C  0  1  Y  N  N   1.893  33.345  33.016  -1.474   1.336   0.540  C9   WZ6  36  
WZ6  H1   H1   H  0  1  N  N  N   2.333  27.591  29.933   5.038   1.113   1.070  H1   WZ6  37  
WZ6  H2   H2   H  0  1  N  N  N   6.011  25.711  31.560   6.592   3.636  -2.472  H2   WZ6  38  
WZ6  H3   H3   H  0  1  N  N  N   4.911  28.628  33.237   3.259   2.838  -2.433  H3   WZ6  39  
WZ6  H4   H4   H  0  1  N  N  N   3.508  30.589  33.820   1.082   1.944  -1.792  H4   WZ6  40  
WZ6  H5   H5   H  0  1  N  N  N  -1.682  31.815  33.524  -1.464  -3.184  -1.436  H5   WZ6  41  
WZ6  H6   H6   H  0  1  N  N  N  -1.621  30.023  33.430  -0.994  -2.217  -2.853  H6   WZ6  42  
WZ6  H7   H7   H  0  1  N  N  N  -3.096  29.744  35.203   0.114  -4.397  -2.969  H7   WZ6  43  
WZ6  H8   H8   H  0  1  N  N  N  -2.774  31.380  35.873   1.334  -3.140  -2.651  H8   WZ6  44  
WZ6  H9   H9   H  0  1  N  N  N  -5.023  29.576  33.612   1.567  -6.070  -1.934  H9   WZ6  45  
WZ6  H10  H10  H  0  1  N  N  N  -3.924  30.346  32.418   2.787  -4.814  -1.616  H10  WZ6  46  
WZ6  H11  H11  H  0  1  N  N  N  -6.270  30.487  31.700   2.557  -5.207   0.822  H11  WZ6  47  
WZ6  H12  H12  H  0  1  N  N  N  -6.695  31.350  33.217   1.337  -6.463   0.504  H12  WZ6  48  
WZ6  H13  H13  H  0  1  N  N  N  -5.595  32.120  32.023   3.020  -6.702  -0.026  H13  WZ6  49  
WZ6  H14  H14  H  0  1  N  N  N  -0.082  32.836  36.329  -2.638  -1.488  -1.786  H14  WZ6  50  
WZ6  H15  H15  H  0  1  N  N  N   0.366  36.042  38.142  -5.066  -1.584  -0.187  H15  WZ6  51  
WZ6  H16  H16  H  0  1  N  N  N  -0.847  35.345  37.016  -6.105  -1.304  -1.605  H16  WZ6  52  
WZ6  H17  H17  H  0  1  N  N  N   0.188  34.260  38.004  -4.429  -1.863  -1.826  H17  WZ6  53  
WZ6  H18  H18  H  0  1  N  N  N   0.024  37.051  36.142  -3.973   0.054  -3.334  H18  WZ6  54  
WZ6  H19  H19  H  0  1  N  N  N   0.678  36.421  34.592  -5.645   0.629  -3.126  H19  WZ6  55  
WZ6  H20  H20  H  0  1  N  N  N  -0.734  35.621  35.362  -4.280   1.720  -2.787  H20  WZ6  56  
WZ6  H21  H21  H  0  1  N  N  N   3.172  35.625  36.982  -6.523   1.146  -0.945  H21  WZ6  57  
WZ6  H22  H22  H  0  1  N  N  N   2.063  37.037  36.942  -5.666   0.663   0.541  H22  WZ6  58  
WZ6  H23  H23  H  0  1  N  N  N   4.096  36.590  35.200  -4.653   2.841  -1.344  H23  WZ6  59  
WZ6  H24  H24  H  0  1  N  N  N   2.649  37.600  34.866  -5.668   3.177   0.082  H24  WZ6  60  
WZ6  H25  H25  H  0  1  N  N  N   3.922  34.409  35.103  -3.266   2.103   2.629  H25  WZ6  61  
WZ6  H26  H26  H  0  1  N  N  N   4.091  34.137  33.335  -4.809   2.935   2.318  H26  WZ6  62  
WZ6  H27  H27  H  0  1  N  N  N   4.826  35.589  34.095  -4.667   1.184   2.028  H27  WZ6  63  
WZ6  H28  H28  H  0  1  N  N  N   3.597  37.168  32.593  -2.638   3.943  -0.535  H28  WZ6  64  
WZ6  H29  H29  H  0  1  N  N  N   3.785  35.472  32.033  -3.622   4.549   0.819  H29  WZ6  65  
WZ6  H30  H30  H  0  1  N  N  N   2.207  36.310  31.846  -2.088   3.705   1.141  H30  WZ6  66  
WZ6  H31  H31  H  0  1  N  N  N   2.442  33.511  32.101  -1.150   2.131   1.195  H31  WZ6  67  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
WZ6  F    C8   SING  N  N   1  
WZ6  O    C7   DOUB  N  N   2  
WZ6  N1   C2   SING  Y  N   3  
WZ6  N1   C    DOUB  Y  N   4  
WZ6  C3   C2   DOUB  Y  N   5  
WZ6  C3   C4   SING  Y  N   6  
WZ6  C8   F2   SING  N  N   7  
WZ6  C8   C    SING  N  N   8  
WZ6  C8   F1   SING  N  N   9  
WZ6  C2   C1   SING  Y  N  10  
WZ6  C    N    SING  Y  N  11  
WZ6  C7   C4   SING  N  N  12  
WZ6  C7   O1   SING  N  N  13  
WZ6  C4   C5   DOUB  Y  N  14  
WZ6  N    C1   SING  Y  N  15  
WZ6  N    C10  SING  N  N  16  
WZ6  C1   C6   DOUB  Y  N  17  
WZ6  C26  C25  SING  N  N  18  
WZ6  C19  C17  SING  N  N  19  
WZ6  C5   C6   SING  Y  N  20  
WZ6  C9   C10  SING  Y  N  21  
WZ6  C9   C18  DOUB  Y  N  22  
WZ6  C10  C11  DOUB  Y  N  23  
WZ6  C25  O3   SING  N  N  24  
WZ6  C17  C18  SING  N  N  25  
WZ6  C17  C20  SING  N  N  26  
WZ6  C17  C16  SING  N  N  27  
WZ6  C18  C13  SING  Y  N  28  
WZ6  C23  O2   SING  N  N  29  
WZ6  C23  C24  SING  N  N  30  
WZ6  O3   C24  SING  N  N  31  
WZ6  C11  O2   SING  N  N  32  
WZ6  C11  C12  SING  Y  N  33  
WZ6  C16  C15  SING  N  N  34  
WZ6  C13  C12  DOUB  Y  N  35  
WZ6  C13  C14  SING  N  N  36  
WZ6  C22  C14  SING  N  N  37  
WZ6  C14  C15  SING  N  N  38  
WZ6  C14  C21  SING  N  N  39  
WZ6  C3   H1   SING  N  N  40  
WZ6  O1   H2   SING  N  N  41  
WZ6  C5   H3   SING  N  N  42  
WZ6  C6   H4   SING  N  N  43  
WZ6  C23  H5   SING  N  N  44  
WZ6  C23  H6   SING  N  N  45  
WZ6  C24  H7   SING  N  N  46  
WZ6  C24  H8   SING  N  N  47  
WZ6  C25  H9   SING  N  N  48  
WZ6  C25  H10  SING  N  N  49  
WZ6  C26  H11  SING  N  N  50  
WZ6  C26  H12  SING  N  N  51  
WZ6  C26  H13  SING  N  N  52  
WZ6  C12  H14  SING  N  N  53  
WZ6  C21  H15  SING  N  N  54  
WZ6  C21  H16  SING  N  N  55  
WZ6  C21  H17  SING  N  N  56  
WZ6  C22  H18  SING  N  N  57  
WZ6  C22  H19  SING  N  N  58  
WZ6  C22  H20  SING  N  N  59  
WZ6  C15  H21  SING  N  N  60  
WZ6  C15  H22  SING  N  N  61  
WZ6  C16  H23  SING  N  N  62  
WZ6  C16  H24  SING  N  N  63  
WZ6  C20  H25  SING  N  N  64  
WZ6  C20  H26  SING  N  N  65  
WZ6  C20  H27  SING  N  N  66  
WZ6  C19  H28  SING  N  N  67  
WZ6  C19  H29  SING  N  N  68  
WZ6  C19  H30  SING  N  N  69  
WZ6  C9   H31  SING  N  N  70  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
WZ6  InChI             InChI                 1.03   "InChI=1S/C27H31F3N2O4/c1-6-35-11-12-36-22-15-18-17(25(2,3)9-10-26(18,4)5)14-21(22)32-20-8-7-16(23(33)34)13-19(20)31-24(32)27(28,29)30/h7-8,13-15H,6,9-12H2,1-5H3,(H,33,34)"  
WZ6  InChIKey          InChI                 1.03   FKCNXNPZSKIRIX-UHFFFAOYSA-N  
WZ6  SMILES_CANONICAL  CACTVS                3.385  "CCOCCOc1cc2c(cc1n3c4ccc(cc4nc3C(F)(F)F)C(O)=O)C(C)(C)CCC2(C)C"  
WZ6  SMILES            CACTVS                3.385  "CCOCCOc1cc2c(cc1n3c4ccc(cc4nc3C(F)(F)F)C(O)=O)C(C)(C)CCC2(C)C"  
WZ6  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCOCCOc1cc2c(cc1n3c4ccc(cc4nc3C(F)(F)F)C(=O)O)C(CCC2(C)C)(C)C"  
WZ6  SMILES            "OpenEye OEToolkits"  2.0.7  "CCOCCOc1cc2c(cc1n3c4ccc(cc4nc3C(F)(F)F)C(=O)O)C(CCC2(C)C)(C)C"  
#
_pdbx_chem_comp_identifier.comp_id          WZ6
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "1-[3-(2-ethoxyethoxy)-5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl]-2-(trifluoromethyl)benzimidazole-5-carboxylic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
WZ6  "Create component"  2020-06-30  PDBJ  
WZ6  "Initial release"   2021-01-06  RCSB  
##
