data_WG6
# 
_chem_comp.id                                    WG6 
_chem_comp.name                                  Sofosbuvir 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H29 F N3 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-09-08 
_chem_comp.pdbx_modified_date                    2022-12-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        529.453 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WG6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8E5B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WG6 C02 C1  C 0 1 N N S 154.566 160.375 146.027 1.867  -2.759 0.060  C02 WG6 1  
WG6 C03 C2  C 0 1 N N N 155.138 158.941 146.151 0.458  -3.119 0.454  C03 WG6 2  
WG6 O04 O1  O 0 1 N N N 154.585 158.058 145.590 0.052  -2.848 1.559  O04 WG6 3  
WG6 C06 C3  C 0 1 N N N 156.229 158.300 148.254 -1.690 -4.058 0.025  C06 WG6 4  
WG6 C07 C4  C 0 1 N N N 156.088 159.553 149.176 -2.643 -4.042 -1.172 C07 WG6 5  
WG6 C08 C5  C 0 1 N N N 155.147 157.240 148.478 -1.700 -5.448 0.666  C08 WG6 6  
WG6 N09 N1  N 0 1 N N N 153.658 160.644 147.128 2.535  -2.092 1.186  N09 WG6 7  
WG6 C13 C6  C 0 1 N N N 151.432 157.612 148.278 1.104  1.007  1.320  C13 WG6 8  
WG6 C14 C7  C 0 1 N N R 150.179 157.014 147.564 0.059  1.879  0.622  C14 WG6 9  
WG6 C15 C8  C 0 1 N N R 149.063 156.663 148.583 -0.779 2.653  1.664  C15 WG6 10 
WG6 C16 C9  C 0 1 N N R 148.547 155.231 148.125 -2.204 2.661  1.068  C16 WG6 11 
WG6 C17 C10 C 0 1 N N R 148.986 155.132 146.927 -2.060 1.891  -0.263 C17 WG6 12 
WG6 C20 C11 C 0 1 N N N 150.386 153.151 146.162 -3.248 -0.248 -0.130 C20 WG6 13 
WG6 C21 C12 C 0 1 N N N 150.469 151.761 145.603 -4.342 -1.006 -0.355 C21 WG6 14 
WG6 C22 C13 C 0 1 N N N 149.221 151.020 145.264 -5.470 -0.421 -0.980 C22 WG6 15 
WG6 C25 C14 C 0 1 N N N 147.843 153.025 146.040 -4.324 1.612  -1.101 C25 WG6 16 
WG6 C27 C15 C 0 1 N N N 149.139 154.196 149.084 -3.179 1.940  2.002  C27 WG6 17 
WG6 C01 C16 C 0 1 N N N 155.701 161.385 146.049 2.635  -4.031 -0.307 C01 WG6 18 
WG6 C31 C17 C 0 1 Y N N 149.913 159.973 145.520 4.682  0.362  -1.002 C31 WG6 19 
WG6 C32 C18 C 0 1 Y N N 149.552 159.348 144.343 5.952  0.717  -0.573 C32 WG6 20 
WG6 C33 C19 C 0 1 Y N N 148.228 158.980 144.127 6.532  1.886  -1.027 C33 WG6 21 
WG6 C34 C20 C 0 1 Y N N 147.267 159.241 145.093 5.847  2.702  -1.909 C34 WG6 22 
WG6 C35 C21 C 0 1 Y N N 147.625 159.868 146.273 4.581  2.350  -2.338 C35 WG6 23 
WG6 C36 C22 C 0 1 Y N N 148.942 160.236 146.487 3.997  1.182  -1.887 C36 WG6 24 
WG6 F28 F1  F 0 1 N N N 147.093 155.181 148.141 -2.630 3.973  0.832  F28 WG6 25 
WG6 N19 N2  N 0 1 N N N 149.087 153.771 146.391 -3.246 1.068  -0.507 N19 WG6 26 
WG6 N24 N3  N 0 1 N N N 147.925 151.646 145.480 -5.428 0.879  -1.337 N24 WG6 27 
WG6 O05 O2  O 0 1 N N N 156.327 158.690 146.885 -0.345 -3.742 -0.423 O05 WG6 28 
WG6 O11 O3  O 0 1 N N N 151.315 160.441 148.289 3.934  -0.017 1.836  O11 WG6 29 
WG6 O12 O4  O 0 1 N N N 152.196 158.276 147.259 1.942  0.391  0.340  O12 WG6 30 
WG6 O18 O5  O 0 1 N N N 150.474 155.886 146.989 -0.896 1.055  -0.081 O18 WG6 31 
WG6 O23 O6  O 0 1 N N N 149.282 149.912 144.814 -6.468 -1.085 -1.194 O23 WG6 32 
WG6 O26 O7  O 0 1 N N N 146.778 153.529 146.214 -4.301 2.783  -1.428 O26 WG6 33 
WG6 O29 O8  O 0 1 N N N 148.077 157.550 148.518 -0.289 3.988  1.808  O29 WG6 34 
WG6 O30 O9  O 0 1 N N N 151.257 160.348 145.729 4.112  -0.790 -0.561 O30 WG6 35 
WG6 P10 P1  P 0 1 N N S 152.056 159.937 147.135 3.154  -0.598 0.720  P10 WG6 36 
WG6 H1  H1  H 0 1 N N N 154.030 160.458 145.070 1.844  -2.088 -0.799 H1  WG6 37 
WG6 H2  H2  H 0 1 N N N 157.183 157.828 148.531 -2.013 -3.318 0.757  H2  WG6 38 
WG6 H3  H3  H 0 1 N N N 156.898 160.264 148.956 -3.652 -4.279 -0.836 H3  WG6 39 
WG6 H4  H4  H 0 1 N N N 155.117 160.035 148.993 -2.636 -3.052 -1.628 H4  WG6 40 
WG6 H5  H5  H 0 1 N N N 156.150 159.242 150.229 -2.320 -4.782 -1.904 H5  WG6 41 
WG6 H6  H6  H 0 1 N N N 155.315 156.394 147.795 -1.021 -5.459 1.519  H6  WG6 42 
WG6 H7  H7  H 0 1 N N N 155.191 156.885 149.518 -2.710 -5.685 1.002  H7  WG6 43 
WG6 H8  H8  H 0 1 N N N 154.158 157.679 148.282 -1.377 -6.188 -0.066 H8  WG6 44 
WG6 H9  H9  H 0 1 N N N 154.115 160.332 147.961 1.909  -1.995 1.971  H9  WG6 45 
WG6 H10 H10 H 0 1 N N N 151.123 158.330 149.052 1.712  1.626  1.980  H10 WG6 46 
WG6 H11 H11 H 0 1 N N N 152.027 156.810 148.739 0.602  0.236  1.905  H11 WG6 47 
WG6 H12 H12 H 0 1 N N N 149.789 157.760 146.855 0.543  2.572  -0.067 H12 WG6 48 
WG6 H13 H13 H 0 1 N N N 149.499 156.581 149.590 -0.768 2.136  2.623  H13 WG6 49 
WG6 H14 H14 H 0 1 N N N 148.375 155.729 146.234 -1.904 2.586  -1.088 H14 WG6 50 
WG6 H16 H16 H 0 1 N N N 151.291 153.693 146.395 -2.381 -0.676 0.350  H16 WG6 51 
WG6 H17 H17 H 0 1 N N N 151.432 151.298 145.446 -4.357 -2.046 -0.062 H17 WG6 52 
WG6 H18 H18 H 0 1 N N N 148.800 153.191 148.794 -3.155 2.410  2.985  H18 WG6 53 
WG6 H19 H19 H 0 1 N N N 150.237 154.240 149.038 -4.187 2.003  1.593  H19 WG6 54 
WG6 H20 H20 H 0 1 N N N 148.805 154.413 150.109 -2.888 0.893  2.092  H20 WG6 55 
WG6 H21 H21 H 0 1 N N N 155.290 162.401 145.961 2.584  -4.738 0.521  H21 WG6 56 
WG6 H22 H22 H 0 1 N N N 156.254 161.294 146.996 2.192  -4.479 -1.196 H22 WG6 57 
WG6 H23 H23 H 0 1 N N N 156.381 161.190 145.207 3.677  -3.781 -0.508 H23 WG6 58 
WG6 H24 H24 H 0 1 N N N 150.298 159.145 143.589 6.488  0.081  0.116  H24 WG6 59 
WG6 H25 H25 H 0 1 N N N 147.948 158.490 143.206 7.521  2.163  -0.693 H25 WG6 60 
WG6 H26 H26 H 0 1 N N N 146.239 158.955 144.924 6.302  3.615  -2.263 H26 WG6 61 
WG6 H27 H27 H 0 1 N N N 146.878 160.070 147.026 4.048  2.989  -3.026 H27 WG6 62 
WG6 H28 H28 H 0 1 N N N 149.219 160.729 147.407 3.008  0.908  -2.222 H28 WG6 63 
WG6 H29 H29 H 0 1 N N N 147.087 151.150 145.252 -6.196 1.287  -1.766 H29 WG6 64 
WG6 H31 H31 H 0 1 N N N 147.403 157.321 149.147 0.624  4.040  2.122  H31 WG6 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WG6 C02 C03 SING N N 1  
WG6 C02 N09 SING N N 2  
WG6 C02 C01 SING N N 3  
WG6 C03 O04 DOUB N N 4  
WG6 C03 O05 SING N N 5  
WG6 C06 C07 SING N N 6  
WG6 C06 C08 SING N N 7  
WG6 C06 O05 SING N N 8  
WG6 N09 P10 SING N N 9  
WG6 C13 C14 SING N N 10 
WG6 C13 O12 SING N N 11 
WG6 C14 C15 SING N N 12 
WG6 C14 O18 SING N N 13 
WG6 C15 C16 SING N N 14 
WG6 C15 O29 SING N N 15 
WG6 C16 C17 SING N N 16 
WG6 C16 C27 SING N N 17 
WG6 C16 F28 SING N N 18 
WG6 C17 N19 SING N N 19 
WG6 C20 C21 DOUB N N 20 
WG6 C20 N19 SING N N 21 
WG6 C21 C22 SING N N 22 
WG6 C22 N24 SING N N 23 
WG6 C22 O23 DOUB N N 24 
WG6 C25 N19 SING N N 25 
WG6 C25 N24 SING N N 26 
WG6 C25 O26 DOUB N N 27 
WG6 C31 C32 DOUB Y N 28 
WG6 C31 C36 SING Y N 29 
WG6 C31 O30 SING N N 30 
WG6 C32 C33 SING Y N 31 
WG6 C33 C34 DOUB Y N 32 
WG6 C34 C35 SING Y N 33 
WG6 C35 C36 DOUB Y N 34 
WG6 O11 P10 DOUB N N 35 
WG6 O12 P10 SING N N 36 
WG6 O30 P10 SING N N 37 
WG6 C02 H1  SING N N 38 
WG6 C06 H2  SING N N 39 
WG6 C07 H3  SING N N 40 
WG6 C07 H4  SING N N 41 
WG6 C07 H5  SING N N 42 
WG6 C08 H6  SING N N 43 
WG6 C08 H7  SING N N 44 
WG6 C08 H8  SING N N 45 
WG6 N09 H9  SING N N 46 
WG6 C13 H10 SING N N 47 
WG6 C13 H11 SING N N 48 
WG6 C14 H12 SING N N 49 
WG6 C15 H13 SING N N 50 
WG6 C17 H14 SING N N 51 
WG6 C20 H16 SING N N 52 
WG6 C21 H17 SING N N 53 
WG6 C27 H18 SING N N 54 
WG6 C27 H19 SING N N 55 
WG6 C27 H20 SING N N 56 
WG6 C01 H21 SING N N 57 
WG6 C01 H22 SING N N 58 
WG6 C01 H23 SING N N 59 
WG6 C32 H24 SING N N 60 
WG6 C33 H25 SING N N 61 
WG6 C34 H26 SING N N 62 
WG6 C35 H27 SING N N 63 
WG6 C36 H28 SING N N 64 
WG6 N24 H29 SING N N 65 
WG6 O29 H31 SING N N 66 
WG6 C17 O18 SING N N 67 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WG6 SMILES           ACDLabs              12.01 "CC(C)OC(=O)C(C)NP(=O)(Oc1ccccc1)OCC1OC(N2C=CC(=O)NC2=O)C(C)(F)C1O"                                                                                                                                                           
WG6 InChI            InChI                1.06  "InChI=1S/C22H29FN3O9P/c1-13(2)33-19(29)14(3)25-36(31,35-15-8-6-5-7-9-15)32-12-16-18(28)22(4,23)20(34-16)26-11-10-17(27)24-21(26)30/h5-11,13-14,16,18,20,28H,12H2,1-4H3,(H,25,31)(H,24,27,30)/t14-,16+,18+,20+,22+,36-/m0/s1" 
WG6 InChIKey         InChI                1.06  TTZHDVOVKQGIBA-IQWMDFIBSA-N                                                                                                                                                                                                   
WG6 SMILES_CANONICAL CACTVS               3.385 "CC(C)OC(=O)[C@H](C)N[P@](=O)(OC[C@H]1O[C@@H](N2C=CC(=O)NC2=O)[C@](C)(F)[C@@H]1O)Oc3ccccc3"                                                                                                                                   
WG6 SMILES           CACTVS               3.385 "CC(C)OC(=O)[CH](C)N[P](=O)(OC[CH]1O[CH](N2C=CC(=O)NC2=O)[C](C)(F)[CH]1O)Oc3ccccc3"                                                                                                                                           
WG6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C(=O)OC(C)C)N[P@](=O)(OC[C@@H]1[C@H]([C@@]([C@@H](O1)N2C=CC(=O)NC2=O)(C)F)O)Oc3ccccc3"                                                                                                                               
WG6 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)OC(=O)C(C)NP(=O)(OCC1C(C(C(O1)N2C=CC(=O)NC2=O)(C)F)O)Oc3ccccc3"                                                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WG6 "SYSTEMATIC NAME" ACDLabs              12.01 "propan-2-yl (2S)-2-{[(S)-{[(2R,3R,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-4-fluoro-3-hydroxy-4-methyloxolan-2-yl]methoxy}(phenoxy)phosphoryl]amino}propanoate (non-preferred name)" 
WG6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "propan-2-yl (2~{S})-2-[[[(2~{R},3~{R},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methoxy-phenoxy-phosphoryl]amino]propanoate"           
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WG6 "Create component" 2022-09-08 RCSB 
WG6 "Initial release"  2022-12-07 RCSB 
# 
