data_UL6
# 
_chem_comp.id                                    UL6 
_chem_comp.name                                  "[(2S)-1,4-dioxan-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H23 N O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-14 
_chem_comp.pdbx_modified_date                    2023-05-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        321.324 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     UL6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8GF1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
UL6 C1  C1  C 0 1 N N N 28.656 62.300 -14.031 -0.675 4.187  -0.471 C1  UL6 1  
UL6 C2  C2  C 0 1 N N N 29.598 63.344 -14.524 -0.080 2.944  0.139  C2  UL6 2  
UL6 O1  O1  O 0 1 N N N 29.400 64.531 -14.315 -0.537 2.495  1.168  O1  UL6 3  
UL6 N1  N1  N 0 1 N N N 30.707 62.928 -15.166 0.960  2.331  -0.460 N1  UL6 4  
UL6 C3  C3  C 0 1 N N R 31.818 63.752 -15.622 1.539  1.123  0.133  C3  UL6 5  
UL6 C4  C4  C 0 1 N N R 32.072 63.531 -17.111 2.994  0.976  -0.321 C4  UL6 6  
UL6 O2  O2  O 0 1 N N N 30.912 63.837 -17.911 3.760  2.081  0.163  O2  UL6 7  
UL6 C5  C5  C 0 1 N N S 33.310 64.322 -17.565 3.564  -0.330 0.241  C5  UL6 8  
UL6 O3  O3  O 0 1 N N N 33.640 64.021 -18.912 4.898  -0.513 -0.235 O3  UL6 9  
UL6 C6  C6  C 0 1 N N R 34.535 63.993 -16.697 2.691  -1.499 -0.220 C6  UL6 10 
UL6 C7  C7  C 0 1 N N N 35.716 64.840 -17.031 3.218  -2.801 0.387  C7  UL6 11 
UL6 O4  O4  O 0 1 N N N 36.843 64.498 -16.240 2.476  -3.905 -0.135 O4  UL6 12 
UL6 O5  O5  O 0 1 N N N 34.200 64.315 -15.337 1.344  -1.285 0.208  O5  UL6 13 
UL6 C8  C8  C 0 1 N N R 33.138 63.502 -14.843 0.743  -0.103 -0.325 C8  UL6 14 
UL6 O6  O6  O 0 1 N N N 32.980 63.794 -13.481 -0.603 0.000  0.144  O6  UL6 15 
UL6 C9  C9  C 0 1 N N N 33.984 63.150 -12.594 -1.462 -1.041 -0.324 C9  UL6 16 
UL6 C10 C10 C 0 1 N N S 33.308 62.197 -11.619 -2.870 -0.830 0.237  C10 UL6 17 
UL6 C11 C11 C 0 1 N N N 33.959 60.877 -11.379 -3.761 -2.011 -0.161 C11 UL6 18 
UL6 O7  O7  O 0 1 N N N 33.297 60.204 -10.306 -5.101 -1.754 0.271  O7  UL6 19 
UL6 C12 C12 C 0 1 N N N 31.886 60.026 -10.557 -5.654 -0.547 -0.264 C12 UL6 20 
UL6 C13 C13 C 0 1 N N N 31.201 61.290 -10.985 -4.762 0.633  0.133  C13 UL6 21 
UL6 O8  O8  O 0 1 N N N 31.945 61.935 -12.017 -3.423 0.376  -0.298 O8  UL6 22 
UL6 H1  H1  H 0 1 N N N 27.826 62.780 -13.492 -1.500 4.537  0.149  H1  UL6 23 
UL6 H2  H2  H 0 1 N N N 28.259 61.732 -14.885 0.088  4.963  -0.532 H2  UL6 24 
UL6 H3  H3  H 0 1 N N N 29.188 61.617 -13.352 -1.043 3.960  -1.472 H3  UL6 25 
UL6 H4  H4  H 0 1 N N N 30.775 61.947 -15.349 1.326  2.690  -1.284 H4  UL6 26 
UL6 H5  H5  H 0 1 N N N 31.550 64.810 -15.482 1.501  1.196  1.220  H5  UL6 27 
UL6 H6  H6  H 0 1 N N N 32.307 62.465 -17.244 3.036  0.953  -1.410 H6  UL6 28 
UL6 H7  H7  H 0 1 N N N 30.170 63.331 -17.601 4.693  2.053  -0.088 H7  UL6 29 
UL6 H8  H8  H 0 1 N N N 33.092 65.395 -17.463 3.568  -0.286 1.331  H8  UL6 30 
UL6 H9  H9  H 0 1 N N N 34.406 64.520 -19.170 5.322  -1.323 0.082  H9  UL6 31 
UL6 H10 H10 H 0 1 N N N 34.788 62.927 -16.801 2.719  -1.567 -1.308 H10 UL6 32 
UL6 H11 H11 H 0 1 N N N 35.968 64.699 -18.092 4.272  -2.919 0.134  H11 UL6 33 
UL6 H12 H12 H 0 1 N N N 35.461 65.895 -16.852 3.106  -2.768 1.470  H12 UL6 34 
UL6 H13 H13 H 0 1 N N N 37.576 65.054 -16.476 2.757  -4.765 0.207  H13 UL6 35 
UL6 H14 H14 H 0 1 N N N 33.403 62.442 -14.966 0.747  -0.153 -1.413 H14 UL6 36 
UL6 H15 H15 H 0 1 N N N 34.702 62.588 -13.209 -1.498 -1.020 -1.413 H15 UL6 37 
UL6 H16 H16 H 0 1 N N N 34.517 63.928 -12.028 -1.079 -2.006 0.008  H16 UL6 38 
UL6 H17 H17 H 0 1 N N N 33.273 62.716 -10.650 -2.823 -0.760 1.323  H17 UL6 39 
UL6 H18 H18 H 0 1 N N N 33.893 60.265 -12.291 -3.744 -2.131 -1.244 H18 UL6 40 
UL6 H19 H19 H 0 1 N N N 35.016 61.032 -11.117 -3.394 -2.921 0.313  H19 UL6 41 
UL6 H20 H20 H 0 1 N N N 31.409 59.664 -9.634  -5.700 -0.618 -1.351 H20 UL6 42 
UL6 H21 H21 H 0 1 N N N 31.764 59.275 -11.351 -6.657 -0.398 0.134  H21 UL6 43 
UL6 H22 H22 H 0 1 N N N 31.117 61.967 -10.122 -5.130 1.543  -0.341 H22 UL6 44 
UL6 H23 H23 H 0 1 N N N 30.196 61.048 -11.360 -4.780 0.754  1.217  H23 UL6 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
UL6 O3  C5  SING N N 1  
UL6 O2  C4  SING N N 2  
UL6 C5  C4  SING N N 3  
UL6 C5  C6  SING N N 4  
UL6 C4  C3  SING N N 5  
UL6 C7  C6  SING N N 6  
UL6 C7  O4  SING N N 7  
UL6 C6  O5  SING N N 8  
UL6 C3  N1  SING N N 9  
UL6 C3  C8  SING N N 10 
UL6 O5  C8  SING N N 11 
UL6 N1  C2  SING N N 12 
UL6 C8  O6  SING N N 13 
UL6 C2  O1  DOUB N N 14 
UL6 C2  C1  SING N N 15 
UL6 O6  C9  SING N N 16 
UL6 C9  C10 SING N N 17 
UL6 O8  C10 SING N N 18 
UL6 O8  C13 SING N N 19 
UL6 C10 C11 SING N N 20 
UL6 C11 O7  SING N N 21 
UL6 C13 C12 SING N N 22 
UL6 C12 O7  SING N N 23 
UL6 C1  H1  SING N N 24 
UL6 C1  H2  SING N N 25 
UL6 C1  H3  SING N N 26 
UL6 N1  H4  SING N N 27 
UL6 C3  H5  SING N N 28 
UL6 C4  H6  SING N N 29 
UL6 O2  H7  SING N N 30 
UL6 C5  H8  SING N N 31 
UL6 O3  H9  SING N N 32 
UL6 C6  H10 SING N N 33 
UL6 C7  H11 SING N N 34 
UL6 C7  H12 SING N N 35 
UL6 O4  H13 SING N N 36 
UL6 C8  H14 SING N N 37 
UL6 C9  H15 SING N N 38 
UL6 C9  H16 SING N N 39 
UL6 C10 H17 SING N N 40 
UL6 C11 H18 SING N N 41 
UL6 C11 H19 SING N N 42 
UL6 C12 H20 SING N N 43 
UL6 C12 H21 SING N N 44 
UL6 C13 H22 SING N N 45 
UL6 C13 H23 SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
UL6 SMILES           ACDLabs              12.01 "CC(=O)NC1C(O)C(O)C(CO)OC1OCC1COCCO1"                                                                                                                
UL6 InChI            InChI                1.06  "InChI=1S/C13H23NO8/c1-7(16)14-10-12(18)11(17)9(4-15)22-13(10)21-6-8-5-19-2-3-20-8/h8-13,15,17-18H,2-6H2,1H3,(H,14,16)/t8-,9+,10+,11+,12+,13+/m0/s1" 
UL6 InChIKey         InChI                1.06  WYEPHXYJGRPYCT-ZRFFIENRSA-N                                                                                                                          
UL6 SMILES_CANONICAL CACTVS               3.385 "CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OC[C@@H]2COCCO2"                                                                                    
UL6 SMILES           CACTVS               3.385 "CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1OC[CH]2COCCO2"                                                                                              
UL6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1OC[C@@H]2COCCO2)CO)O)O"                                                                                     
UL6 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1OCC2COCCO2)CO)O)O"                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
UL6 "SYSTEMATIC NAME" ACDLabs              12.01 "[(2S)-1,4-dioxan-2-yl]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside"                                                            
UL6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-2-[[(2~{S})-1,4-dioxan-2-yl]methoxy]-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
UL6 "Create component" 2023-03-14 RCSB 
UL6 "Initial release"  2023-05-24 RCSB 
# 
