data_TZ6
# 
_chem_comp.id                                    TZ6 
_chem_comp.name                                  "9,11-bis(4-fluorophenyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{4},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecane" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H18 F2 N2 O4 Ru2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-18 
_chem_comp.pdbx_modified_date                    2023-06-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        554.473 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     TZ6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BPJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TZ6 C11 C1  C  0 1 Y N N 0.618  -23.792 21.789 -4.408 -2.970 0.131  C11 TZ6 1  
TZ6 C12 C2  C  0 1 Y N N -0.385 -24.708 21.713 -4.262 -1.726 0.723  C12 TZ6 2  
TZ6 C13 C3  C  0 1 Y N N -0.823 -25.131 20.485 -3.248 -0.882 0.317  C13 TZ6 3  
TZ6 RU1 RU1 RU 0 0 N N N -0.612 -25.365 14.920 1.286  1.151  -0.013 RU1 TZ6 4  
TZ6 RU2 RU2 RU 0 0 N N N 0.839  -24.872 16.636 -1.284 1.151  -0.011 RU2 TZ6 5  
TZ6 F1  F1  F  0 1 N N N -6.841 -27.615 14.459 5.395  -3.799 0.531  F1  TZ6 6  
TZ6 F2  F2  F  0 1 N N N 1.031  -23.380 22.999 -5.401 -3.794 0.530  F2  TZ6 7  
TZ6 O3  O1  O  0 1 N N N -1.176 -23.417 14.987 1.321  2.790  -0.809 O3  TZ6 8  
TZ6 O1  O2  O  0 1 N N N -0.020 -27.314 14.929 1.323  0.991  1.801  O1  TZ6 9  
TZ6 O2  O3  O  0 1 N N N 1.381  -26.798 17.056 -1.318 0.991  1.803  O2  TZ6 10 
TZ6 O4  O4  O  0 1 N N N 0.502  -22.939 16.163 -1.321 2.789  -0.807 O4  TZ6 11 
TZ6 N1  N1  N  0 1 N N N -1.989 -25.761 16.355 1.345  -0.427 -1.101 N1  TZ6 12 
TZ6 N2  N2  N  0 1 N N N -0.614 -24.981 18.004 -1.345 -0.427 -1.099 N2  TZ6 13 
TZ6 C2  C4  C  0 1 Y N N -3.252 -26.249 15.906 2.374  -1.280 -0.690 C2  TZ6 14 
TZ6 C3  C5  C  0 1 Y N N -4.150 -25.378 15.299 3.247  -0.884 0.315  C3  TZ6 15 
TZ6 C4  C6  C  0 1 Y N N -5.371 -25.837 14.816 4.259  -1.730 0.723  C4  TZ6 16 
TZ6 C7  C7  C  0 1 Y N N -3.559 -27.602 15.979 2.521  -2.528 -1.282 C7  TZ6 17 
TZ6 C1  C8  C  0 1 N N N -1.714 -25.638 17.643 0.000  -1.079 -0.922 C1  TZ6 18 
TZ6 C6  C9  C  0 1 Y N N -4.756 -28.065 15.499 3.538  -3.369 -0.874 C6  TZ6 19 
TZ6 C5  C10 C  0 1 Y N N -5.637 -27.187 14.935 4.404  -2.973 0.131  C5  TZ6 20 
TZ6 C8  C11 C  0 1 Y N N -0.252 -24.616 19.339 -2.373 -1.280 -0.686 C8  TZ6 21 
TZ6 C10 C12 C  0 1 Y N N 1.205  -23.277 20.686 -3.541 -3.367 -0.873 C10 TZ6 22 
TZ6 C9  C13 C  0 1 Y N N 0.776  -23.682 19.444 -2.522 -2.528 -1.278 C9  TZ6 23 
TZ6 H1  H1  H  0 1 N N N -0.833 -25.099 22.614 -4.943 -1.417 1.502  H1  TZ6 24 
TZ6 H2  H2  H  0 1 N N N -1.612 -25.865 20.414 -3.135 0.088  0.778  H2  TZ6 25 
TZ6 H7  H7  H  0 1 N N N -3.896 -24.333 15.201 3.134  0.086  0.777  H7  TZ6 26 
TZ6 H8  H8  H  0 1 N N N -6.084 -25.163 14.365 4.937  -1.422 1.505  H8  TZ6 27 
TZ6 H9  H9  H  0 1 N N N -2.852 -28.291 16.416 1.841  -2.840 -2.061 H9  TZ6 28 
TZ6 H10 H10 H  0 1 N N N -2.567 -25.121 18.108 -0.000 -1.948 -1.580 H10 TZ6 29 
TZ6 H11 H11 H  0 1 N N N -1.633 -26.655 18.055 0.001  -1.495 0.085  H11 TZ6 30 
TZ6 H12 H12 H  0 1 N N N -5.001 -29.115 15.566 3.653  -4.339 -1.335 H12 TZ6 31 
TZ6 H13 H13 H  0 1 N N N 2.003  -22.555 20.779 -3.659 -4.336 -1.335 H13 TZ6 32 
TZ6 H14 H14 H  0 1 N N N 1.234  -23.278 18.554 -1.843 -2.840 -2.058 H14 TZ6 33 
TZ6 C15 C15 C  0 1 N N N ?      ?       ?      0.002  1.442  2.254  C15 TZ6 34 
TZ6 C16 C16 C  0 1 N N N ?      ?       ?      -0.001 2.945  -1.428 C16 TZ6 35 
TZ6 C14 C14 C  0 1 N N N ?      ?       ?      -0.001 4.344  -2.047 C14 TZ6 36 
TZ6 C17 C17 C  0 1 N N N ?      ?       ?      0.004  1.254  3.772  C17 TZ6 37 
TZ6 H3  H3  H  0 1 N N N ?      ?       ?      0.002  2.524  2.122  H3  TZ6 38 
TZ6 H4  H4  H  0 1 N N N ?      ?       ?      -0.001 2.276  -2.288 H4  TZ6 39 
TZ6 H5  H5  H  0 1 N N N ?      ?       ?      0.795  4.413  -2.788 H5  TZ6 40 
TZ6 H6  H6  H  0 1 N N N ?      ?       ?      -0.962 4.528  -2.528 H6  TZ6 41 
TZ6 H15 H15 H  0 1 N N N ?      ?       ?      0.163  5.087  -1.267 H15 TZ6 42 
TZ6 H16 H16 H  0 1 N N N ?      ?       ?      0.801  1.853  4.212  H16 TZ6 43 
TZ6 H17 H17 H  0 1 N N N ?      ?       ?      -0.956 1.572  4.179  H17 TZ6 44 
TZ6 H18 H18 H  0 1 N N N ?      ?       ?      0.167  0.202  4.008  H18 TZ6 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TZ6 F1  C5  SING N N 1  
TZ6 C4  C5  DOUB Y N 2  
TZ6 C4  C3  SING Y N 3  
TZ6 RU1 O1  SING N N 4  
TZ6 RU1 O3  SING N N 5  
TZ6 RU1 N1  SING N N 6  
TZ6 RU1 RU2 SING N N 7  
TZ6 C5  C6  SING Y N 8  
TZ6 C3  C2  DOUB Y N 9  
TZ6 C6  C7  DOUB Y N 10 
TZ6 C2  C7  SING Y N 11 
TZ6 C2  N1  SING N N 12 
TZ6 O4  RU2 SING N N 13 
TZ6 N1  C1  SING N N 14 
TZ6 RU2 O2  SING N N 15 
TZ6 RU2 N2  SING N N 16 
TZ6 C1  N2  SING N N 17 
TZ6 N2  C8  SING N N 18 
TZ6 C8  C9  DOUB Y N 19 
TZ6 C8  C13 SING Y N 20 
TZ6 C9  C10 SING Y N 21 
TZ6 C13 C12 DOUB Y N 22 
TZ6 C10 C11 DOUB Y N 23 
TZ6 C12 C11 SING Y N 24 
TZ6 C11 F2  SING N N 25 
TZ6 C12 H1  SING N N 26 
TZ6 C13 H2  SING N N 27 
TZ6 C3  H7  SING N N 28 
TZ6 C4  H8  SING N N 29 
TZ6 C7  H9  SING N N 30 
TZ6 C1  H10 SING N N 31 
TZ6 C1  H11 SING N N 32 
TZ6 C6  H12 SING N N 33 
TZ6 C10 H13 SING N N 34 
TZ6 C9  H14 SING N N 35 
TZ6 O1  C15 SING N N 36 
TZ6 O2  C15 SING N N 37 
TZ6 O4  C16 SING N N 38 
TZ6 O3  C16 SING N N 39 
TZ6 C16 C14 SING N N 40 
TZ6 C15 C17 SING N N 41 
TZ6 C15 H3  SING N N 42 
TZ6 C16 H4  SING N N 43 
TZ6 C14 H5  SING N N 44 
TZ6 C14 H6  SING N N 45 
TZ6 C14 H15 SING N N 46 
TZ6 C17 H16 SING N N 47 
TZ6 C17 H17 SING N N 48 
TZ6 C17 H18 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TZ6 InChI            InChI                1.06  "InChI=1S/C13H10F2N2.2C2H4O2.2Ru/c14-10-1-5-12(6-2-10)16-9-17-13-7-3-11(15)4-8-13;2*1-2(3)4;;/h1-8H,9H2;2*2H,1H3;;/q3*-2;2*+3" 
TZ6 InChIKey         InChI                1.06  NOQXZAUOMFZMHS-UHFFFAOYSA-N                                                                                                    
TZ6 SMILES_CANONICAL CACTVS               3.385 "CC1O[Ru]23OC(C)O[Ru]2(O1)N(CN3c4ccc(F)cc4)c5ccc(F)cc5"                                                                        
TZ6 SMILES           CACTVS               3.385 "CC1O[Ru]23OC(C)O[Ru]2(O1)N(CN3c4ccc(F)cc4)c5ccc(F)cc5"                                                                        
TZ6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1O[Ru]23N(CN([Ru]2(O1)OC(O3)C)c4ccc(cc4)F)c5ccc(cc5)F"                                                                      
TZ6 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1O[Ru]23N(CN([Ru]2(O1)OC(O3)C)c4ccc(cc4)F)c5ccc(cc5)F"                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           TZ6 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "9,11-bis(4-fluorophenyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{4},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecane" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TZ6 "Create component" 2023-01-18 PDBE 
TZ6 "Initial release"  2023-06-28 RCSB 
# 
