data_PA6
#

_chem_comp.id                                   PA6
_chem_comp.name                                 "(R)-2-(FORMYLOXY)-3-(PHOSPHONOOXY)PROPYL PENTANOATE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H17 O8 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "PHOSPHATIDIC ACID"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2006-11-07
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       284.200
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    PA6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2NR9
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PA6  O32   O32   O  0  1  N  N  N  -33.432   0.486  17.950   0.933   0.009   7.745  O32   PA6   1  
PA6  C31   C31   C  0  1  N  N  N  -33.221  -0.235  18.912   0.926   0.499   6.624  C31   PA6   2  
PA6  C32   C32   C  0  1  N  N  N  -32.456   0.288  20.106  -0.278   0.575   5.713  C32   PA6   3  
PA6  C33   C33   C  0  1  N  N  N  -31.141  -0.469  20.250  -1.515  -0.061   6.345  C33   PA6   4  
PA6  C34   C34   C  0  1  N  N  N  -30.206   0.238  21.223  -2.732   0.059   5.429  C34   PA6   5  
PA6  C35   C35   C  0  1  N  N  N  -30.514  -0.152  22.652  -3.974  -0.539   6.071  C35   PA6   6  
PA6  O31   O31   O  0  1  N  N  N  -33.717  -1.606  18.891   1.996   1.065   5.990  O31   PA6   7  
PA6  C3    C3    C  0  1  N  N  N  -34.628  -2.070  19.889   3.220   1.070   6.732  C3    PA6   8  
PA6  C2    C2    C  0  1  N  N  R  -36.049  -1.620  19.557   4.304   1.731   5.891  C2    PA6   9  
PA6  O21   O21   O  0  1  N  N  N  -36.750  -2.672  18.894   3.882   3.064   5.594  O21   PA6  10  
PA6  C21   C21   C  0  1  N  N  N  -37.635  -3.543  19.652   4.736   3.787   4.825  C21   PA6  11  
PA6  O22   O22   O  0  1  N  N  N  -38.842  -3.362  19.626   5.809   3.430   4.365  O22   PA6  12  
PA6  C1    C1    C  0  1  N  N  N  -36.781  -1.270  20.845   5.630   1.793   6.641  C1    PA6  13  
PA6  O11   O11   O  0  1  N  N  N  -35.877  -1.352  21.943   5.474   2.551   7.836  O11   PA6  14  
PA6  P     P     P  0  1  N  N  N  -35.568  -0.046  22.827   6.762   2.747   8.792  P     PA6  15  
PA6  O13   O13   O  0  1  N  N  N  -34.616  -0.538  23.892   7.245   1.226   9.054  O13   PA6  16  
PA6  O14   O14   O  0  1  N  N  N  -34.959   0.920  21.837   6.517   3.557  10.032  O14   PA6  17  
PA6  O12   O12   O  0  1  N  N  N  -36.924   0.369  23.346   7.895   3.331   7.797  O12   PA6  18  
PA6  H321  1H32  H  0  0  N  N  N  -32.247   1.359  19.964  -0.476   1.631   5.497  H321  PA6  19  
PA6  H322  2H32  H  0  0  N  N  N  -33.059   0.144  21.015  -0.033   0.057   4.779  H322  PA6  20  
PA6  H331  1H33  H  0  0  N  N  N  -31.351  -1.481  20.628  -1.317  -1.119   6.560  H331  PA6  21  
PA6  H332  2H33  H  0  0  N  N  N  -30.653  -0.515  19.265  -1.728   0.421   7.308  H332  PA6  22  
PA6  H341  1H34  H  0  0  N  N  N  -29.169  -0.045  20.991  -2.536  -0.453   4.480  H341  PA6  23  
PA6  H342  2H34  H  0  0  N  N  N  -30.346   1.324  21.118  -2.920   1.114   5.196  H342  PA6  24  
PA6  H351  1H35  H  0  0  N  N  N  -30.589  -1.247  22.726  -3.830  -1.602   6.288  H351  PA6  25  
PA6  H352  2H35  H  0  0  N  N  N  -29.709   0.206  23.311  -4.217  -0.026   7.007  H352  PA6  26  
PA6  H353  3H35  H  0  0  N  N  N  -31.468   0.302  22.958  -4.832  -0.443   5.398  H353  PA6  27  
PA6  H31   1H3   H  0  1  N  N  N  -34.596  -3.169  19.926   3.047   1.622   7.662  H31   PA6  28  
PA6  H32   2H3   H  0  1  N  N  N  -34.337  -1.651  20.863   3.479   0.032   6.965  H32   PA6  29  
PA6  H2    H2    H  0  1  N  N  N  -36.004  -0.740  18.899   4.416   1.214   4.931  H2    PA6  30  
PA6  H21   H21   H  0  1  N  N  N  -37.224  -4.351  20.239   4.302   4.787   4.667  H21   PA6  31  
PA6  H11   1H1   H  0  1  N  N  N  -37.179  -0.247  20.774   6.411   2.268   6.039  H11   PA6  32  
PA6  H12   2H1   H  0  1  N  N  N  -37.610  -1.977  20.999   5.967   0.793   6.932  H12   PA6  33  
PA6  HO12  HO12  H  0  0  N  N  N  -36.889   0.456  24.291   8.763   3.595   8.170  HO12  PA6  34  
PA6  HO13  HO13  H  0  0  N  N  N  -33.749  -0.641  23.519   7.972   1.063   9.692  HO13  PA6  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PA6  O32  C31   DOUB  N  N   1  
PA6  C31  O31   SING  N  N   2  
PA6  C31  C32   SING  N  N   3  
PA6  C32  C33   SING  N  N   4  
PA6  C32  H321  SING  N  N   5  
PA6  C32  H322  SING  N  N   6  
PA6  C33  C34   SING  N  N   7  
PA6  C33  H331  SING  N  N   8  
PA6  C33  H332  SING  N  N   9  
PA6  C34  C35   SING  N  N  10  
PA6  C34  H341  SING  N  N  11  
PA6  C34  H342  SING  N  N  12  
PA6  C35  H351  SING  N  N  13  
PA6  C35  H352  SING  N  N  14  
PA6  C35  H353  SING  N  N  15  
PA6  O31  C3    SING  N  N  16  
PA6  C3   C2    SING  N  N  17  
PA6  C3   H31   SING  N  N  18  
PA6  C3   H32   SING  N  N  19  
PA6  C2   O21   SING  N  N  20  
PA6  C2   C1    SING  N  N  21  
PA6  C2   H2    SING  N  N  22  
PA6  O21  C21   SING  N  N  23  
PA6  C21  O22   DOUB  N  N  24  
PA6  C21  H21   SING  N  N  25  
PA6  C1   O11   SING  N  N  26  
PA6  C1   H11   SING  N  N  27  
PA6  C1   H12   SING  N  N  28  
PA6  O11  P     SING  N  N  29  
PA6  P    O14   DOUB  N  N  30  
PA6  P    O13   SING  N  N  31  
PA6  P    O12   SING  N  N  32  
PA6  O13  HO13  SING  N  N  33  
PA6  O12  HO12  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PA6  SMILES            ACDLabs               10.04  "O=P(O)(OCC(OC=O)COC(=O)CCCC)O"  
PA6  SMILES_CANONICAL  CACTVS                3.341  "CCCCC(=O)OC[C@H](CO[P](O)(O)=O)OC=O"  
PA6  SMILES            CACTVS                3.341  "CCCCC(=O)OC[CH](CO[P](O)(O)=O)OC=O"  
PA6  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCCC(=O)OC[C@H](COP(=O)(O)O)OC=O"  
PA6  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCCC(=O)OCC(COP(=O)(O)O)OC=O"  
PA6  InChI             InChI                 1.03   "InChI=1S/C9H17O8P/c1-2-3-4-9(11)15-5-8(16-7-10)6-17-18(12,13)14/h7-8H,2-6H2,1H3,(H2,12,13,14)/t8-/m1/s1"  
PA6  InChIKey          InChI                 1.03   JDTMNMAQWVSSOO-MRVPVSSYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PA6  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2R)-2-(formyloxy)-3-(phosphonooxy)propyl pentanoate"  
PA6  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "[(2R)-2-methanoyloxy-3-phosphonooxy-propyl] pentanoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PA6  "Create component"   2006-11-07  RCSB  
PA6  "Modify descriptor"  2011-06-04  RCSB  
PA6  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     PA6
_pdbx_chem_comp_synonyms.name        "PHOSPHATIDIC ACID"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
