data_JI6
# 
_chem_comp.id                                    JI6 
_chem_comp.name                                  "(6~{S})-6-[(1~{R})-1-oxidanylethyl]-2,4-dioxa-7$l^{4}-aza-3$l^{3}-cupratricyclo[7.4.0.0^{3,7}]trideca-1(13),7,9,11-tetraen-5-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H11 Cu N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-08-16 
_chem_comp.pdbx_modified_date                    2023-05-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        284.755 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JI6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   Y 
_chem_comp.pdbx_model_coordinates_db_code        7YRK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JI6 C1  C1  C  0 1 N N N -7.848  7.515 14.985 ? ? ? C1  JI6 1  
JI6 C2  C2  C  0 1 Y N N -10.463 7.535 19.538 ? ? ? C2  JI6 2  
JI6 C3  C3  C  0 1 Y N N -11.091 7.780 20.802 ? ? ? C3  JI6 3  
JI6 C4  C4  C  0 1 Y N N -10.865 6.842 21.867 ? ? ? C4  JI6 4  
JI6 O4  O1  O  0 1 N N N -10.291 6.366 14.423 ? ? ? O4  JI6 5  
JI6 C5  C5  C  0 1 Y N N -10.031 5.685 21.689 ? ? ? C5  JI6 6  
JI6 C6  C6  C  0 1 Y N N -9.421  5.461 20.399 ? ? ? C6  JI6 7  
JI6 C11 C7  C  0 1 N N N -9.837  4.214 15.611 ? ? ? C11 JI6 8  
JI6 C10 C8  C  0 1 N N R -9.214  5.456 14.859 ? ? ? C10 JI6 9  
JI6 C7  C9  C  0 1 Y N N -9.648  6.389 19.335 ? ? ? C7  JI6 10 
JI6 C8  C10 C  0 1 N N N -8.955  6.053 18.045 ? ? ? C8  JI6 11 
JI6 C9  C11 C  0 1 N N S -8.272  6.296 15.796 ? ? ? C9  JI6 12 
JI6 CU  CU1 CU 0 0 N N N -9.453  8.714 17.016 ? ? ? CU  JI6 13 
JI6 N1  N1  N  0 1 N N N -9.010  6.784 16.995 ? ? ? N1  JI6 14 
JI6 O1  O2  O  0 1 N N N -7.099  7.361 14.007 ? ? ? O1  JI6 15 
JI6 O2  O3  O  0 1 N N N -8.304  8.732 15.341 ? ? ? O2  JI6 16 
JI6 O3  O4  O  0 1 N N N -10.678 8.480 18.564 ? ? ? O3  JI6 17 
JI6 H1  H1  H  0 1 N N N -11.718 8.647 20.951 ? ? ? H1  JI6 18 
JI6 H2  H2  H  0 1 N N N -11.334 7.011 22.825 ? ? ? H2  JI6 19 
JI6 H3  H3  H  0 1 N N N -9.913  7.111 13.971 ? ? ? H3  JI6 20 
JI6 H4  H4  H  0 1 N N N -9.864  4.996 22.504 ? ? ? H4  JI6 21 
JI6 H5  H5  H  0 1 N N N -8.795  4.595 20.239 ? ? ? H5  JI6 22 
JI6 H6  H6  H  0 1 N N N -9.031  3.538 15.934 ? ? ? H6  JI6 23 
JI6 H7  H7  H  0 1 N N N -10.399 4.562 16.491 ? ? ? H7  JI6 24 
JI6 H8  H8  H  0 1 N N N -10.515 3.677 14.932 ? ? ? H8  JI6 25 
JI6 H9  H9  H  0 1 N N N -8.637  5.099 13.993 ? ? ? H9  JI6 26 
JI6 H10 H10 H  0 1 N N N -8.377  5.142 18.001 ? ? ? H10 JI6 27 
JI6 H11 H11 H  0 1 N N N -7.396  5.697 16.085 ? ? ? H11 JI6 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JI6 O1  C1  DOUB N N 1  
JI6 O4  C10 SING N N 2  
JI6 C10 C11 SING N N 3  
JI6 C10 C9  SING N N 4  
JI6 C1  O2  SING N N 5  
JI6 C1  C9  SING N N 6  
JI6 O2  CU  SING N N 7  
JI6 C9  N1  SING N N 8  
JI6 N1  CU  SING N N 9  
JI6 N1  C8  DOUB N N 10 
JI6 CU  O3  SING N N 11 
JI6 C8  C7  SING N N 12 
JI6 O3  C2  SING N N 13 
JI6 C7  C2  SING Y N 14 
JI6 C7  C6  DOUB Y N 15 
JI6 C2  C3  DOUB Y N 16 
JI6 C6  C5  SING Y N 17 
JI6 C3  C4  SING Y N 18 
JI6 C5  C4  DOUB Y N 19 
JI6 C3  H1  SING N N 20 
JI6 C4  H2  SING N N 21 
JI6 O4  H3  SING N N 22 
JI6 C5  H4  SING N N 23 
JI6 C6  H5  SING N N 24 
JI6 C11 H6  SING N N 25 
JI6 C11 H7  SING N N 26 
JI6 C11 H8  SING N N 27 
JI6 C10 H9  SING N N 28 
JI6 C8  H10 SING N N 29 
JI6 C9  H11 SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JI6 InChI            InChI                1.06  "InChI=1S/C11H13NO4.Cu/c1-7(13)10(11(15)16)12-6-8-4-2-3-5-9(8)14;/h2-7,10,13-14H,1H3,(H,15,16);/q;+2/p-2/b12-6+;/t7-,10+;/m1./s1" 
JI6 InChIKey         InChI                1.06  RLMUPHKMYNMLMB-NBDMYRNNSA-L                                                                                                       
JI6 SMILES_CANONICAL CACTVS               3.385 "C[C@@H](O)[C@@H]1N=Cc2ccccc2O[Cu]OC1=O"                                                                                          
JI6 SMILES           CACTVS               3.385 "C[CH](O)[CH]1N=Cc2ccccc2O[Cu]OC1=O"                                                                                              
JI6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]([C@H]1C(=O)O[Cu]2[N]1=Cc3ccccc3O2)O"                                                                                      
JI6 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C1C(=O)O[Cu]2[N]1=Cc3ccccc3O2)O"                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           JI6 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(6~{S})-6-[(1~{R})-1-oxidanylethyl]-2,4-dioxa-7$l^{4}-aza-3$l^{3}-cupratricyclo[7.4.0.0^{3,7}]trideca-1(13),7,9,11-tetraen-5-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JI6 "Create component" 2022-08-16 PDBJ 
JI6 "Initial release"  2023-05-10 RCSB 
# 
