data_GX6
#

_chem_comp.id                                   GX6
_chem_comp.name                                 "N-[3-[(9S)-7-azanyl-2,2-bis(fluoranyl)-9-prop-1-ynyl-6-oxa-8-azaspiro[3.5]non-7-en-9-yl]-4-fluoranyl-phenyl]-5-cyano-pyridine-2-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H18 F3 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-10-01
_chem_comp.pdbx_modified_date                   2021-03-26
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       453.417
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GX6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7D5A
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GX6  C1   C1   C  0  1  Y  N  N  19.987  38.368   -9.155   1.728  -1.103   1.687  C1   GX6   1  
GX6  C2   C2   C  0  1  Y  N  N  21.314  38.674   -8.873   0.664  -1.827   2.197  C2   GX6   2  
GX6  C3   C3   C  0  1  Y  N  N  21.606  39.366   -7.710  -0.632  -1.429   1.934  C3   GX6   3  
GX6  C4   C4   C  0  1  Y  N  N  20.577  39.758   -6.853  -0.868  -0.302   1.157  C4   GX6   4  
GX6  C5   C5   C  0  1  N  N  N  21.935  40.940   -5.132  -3.148  -0.819   0.717  C5   GX6   5  
GX6  C6   C6   C  0  1  Y  N  N  21.767  41.672   -3.829  -4.515  -0.396   0.334  C6   GX6   6  
GX6  N1   N1   N  0  1  N  N  N  20.774  40.467   -5.641  -2.180   0.103   0.889  N1   GX6   7  
GX6  N2   N2   N  0  1  Y  N  N  20.707  41.361   -3.061  -4.775   0.895   0.156  N2   GX6   8  
GX6  N3   N3   N  0  1  N  N  N  21.116  44.102    0.870  -9.356   1.255  -1.039  N3   GX6   9  
GX6  O1   O1   O  0  1  N  N  N  23.039  40.795   -5.639  -2.899  -1.998   0.877  O1   GX6  10  
GX6  C7   C7   C  0  1  Y  N  N  20.538  41.994   -1.889  -5.971   1.319  -0.184  C7   GX6  11  
GX6  C8   C8   C  0  1  Y  N  N  21.419  42.986   -1.443  -7.022   0.415  -0.373  C8   GX6  12  
GX6  C9   C9   C  0  1  N  N  N  21.257  43.620   -0.160  -8.324   0.883  -0.744  C9   GX6  13  
GX6  C10  C10  C  0  1  Y  N  N  22.528  43.280   -2.239  -6.784  -0.952  -0.194  C10  GX6  14  
GX6  C11  C11  C  0  1  Y  N  N  22.700  42.630   -3.444  -5.509  -1.356   0.159  C11  GX6  15  
GX6  C12  C12  C  0  1  Y  N  N  19.263  39.441   -7.152   0.202   0.423   0.647  C12  GX6  16  
GX6  C13  C13  C  0  1  Y  N  N  18.940  38.748   -8.315   1.496   0.021   0.912  C13  GX6  17  
GX6  C14  C14  C  0  1  N  N  S  17.473  38.401   -8.630   2.657   0.807   0.359  C14  GX6  18  
GX6  C15  C15  C  0  1  N  N  N  17.367  36.985   -9.042   2.214   2.173   0.032  C15  GX6  19  
GX6  O2   O2   O  0  1  N  N  N  15.975  40.764   -7.840   5.439   0.369  -0.149  O2   GX6  20  
GX6  F1   F1   F  0  1  N  N  N  19.714  37.699  -10.283   2.996  -1.491   1.951  F1   GX6  21  
GX6  C16  C16  C  0  1  N  N  N  17.330  35.667   -9.454   1.862   3.262  -0.229  C16  GX6  22  
GX6  C17  C17  C  0  1  N  N  N  17.421  34.255   -9.836   1.419   4.627  -0.555  C17  GX6  23  
GX6  C18  C18  C  0  1  N  N  N  16.839  39.361   -9.694   3.180   0.124  -0.903  C18  GX6  24  
GX6  C19  C19  C  0  1  N  N  N  17.363  39.365  -11.162   3.041  -1.401  -0.887  C19  GX6  25  
GX6  C20  C20  C  0  1  N  N  N  15.905  39.241  -11.679   2.653  -1.298  -2.372  C20  GX6  26  
GX6  F2   F2   F  0  1  N  N  N  15.712  38.241  -12.568   1.610  -2.155  -2.740  F2   GX6  27  
GX6  F3   F3   F  0  1  N  N  N  15.386  40.408  -12.149   3.745  -1.367  -3.243  F3   GX6  28  
GX6  C21  C21  C  0  1  N  N  N  15.463  38.877  -10.240   2.193   0.140  -2.074  C21  GX6  29  
GX6  C22  C22  C  0  1  N  N  N  16.725  40.778   -9.080   4.583   0.612  -1.272  C22  GX6  30  
GX6  C23  C23  C  0  1  N  N  N  15.955  39.708   -7.131   4.967   0.668   1.073  C23  GX6  31  
GX6  N4   N4   N  0  1  N  N  N  15.211  39.804   -6.039   5.876   0.771   2.098  N4   GX6  32  
GX6  N5   N5   N  0  1  N  N  N  16.620  38.494   -7.416   3.726   0.866   1.355  N5   GX6  33  
GX6  H1   H1   H  0  1  N  N  N  22.102  38.377   -9.549   0.847  -2.703   2.801  H1   GX6  34  
GX6  H2   H2   H  0  1  N  N  N  22.631  39.603   -7.466  -1.462  -1.994   2.331  H2   GX6  35  
GX6  H3   H3   H  0  1  N  N  N  19.954  40.639   -5.095  -2.393   1.047   0.827  H3   GX6  36  
GX6  H4   H4   H  0  1  N  N  N  19.694  41.729   -1.270  -6.144   2.376  -0.319  H4   GX6  37  
GX6  H5   H5   H  0  1  N  N  N  23.249  44.014   -1.912  -7.575  -1.674  -0.332  H5   GX6  38  
GX6  H6   H6   H  0  1  N  N  N  23.544  42.861   -4.077  -5.287  -2.404   0.301  H6   GX6  39  
GX6  H7   H7   H  0  1  N  N  N  18.477  39.736   -6.473   0.021   1.299   0.042  H7   GX6  40  
GX6  H8   H8   H  0  1  N  N  N  16.495  33.953  -10.347   2.259   5.195  -0.956  H8   GX6  41  
GX6  H9   H9   H  0  1  N  N  N  18.277  34.113  -10.512   0.623   4.583  -1.299  H9   GX6  42  
GX6  H10  H10  H  0  1  N  N  N  17.560  33.640   -8.935   1.048   5.114   0.346  H10  GX6  43  
GX6  H11  H11  H  0  1  N  N  N  18.004  38.507  -11.413   3.982  -1.924  -0.717  H11  GX6  44  
GX6  H12  H12  H  0  1  N  N  N  17.867  40.297  -11.457   2.235  -1.760  -0.247  H12  GX6  45  
GX6  H13  H13  H  0  1  N  N  N  14.605  39.459   -9.873   1.149   0.210  -1.765  H13  GX6  46  
GX6  H14  H14  H  0  1  N  N  N  15.271  37.805  -10.087   2.453   0.854  -2.855  H14  GX6  47  
GX6  H15  H15  H  0  1  N  N  N  17.736  41.163   -8.881   4.556   1.679  -1.492  H15  GX6  48  
GX6  H16  H16  H  0  1  N  N  N  16.216  41.438   -9.798   4.948   0.064  -2.140  H16  GX6  49  
GX6  H17  H17  H  0  1  N  N  N  14.728  40.656   -5.837   6.820   0.629   1.924  H17  GX6  50  
GX6  H18  H18  H  0  1  N  N  N  15.133  39.025   -5.417   5.574   0.986   2.994  H18  GX6  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GX6  F2   C20  SING  N  N   1  
GX6  F3   C20  SING  N  N   2  
GX6  C20  C19  SING  N  N   3  
GX6  C20  C21  SING  N  N   4  
GX6  C19  C18  SING  N  N   5  
GX6  F1   C1   SING  N  N   6  
GX6  C21  C18  SING  N  N   7  
GX6  C17  C16  SING  N  N   8  
GX6  C18  C22  SING  N  N   9  
GX6  C18  C14  SING  N  N  10  
GX6  C16  C15  TRIP  N  N  11  
GX6  C1   C2   DOUB  Y  N  12  
GX6  C1   C13  SING  Y  N  13  
GX6  C22  O2   SING  N  N  14  
GX6  C15  C14  SING  N  N  15  
GX6  C2   C3   SING  Y  N  16  
GX6  C14  C13  SING  N  N  17  
GX6  C14  N5   SING  N  N  18  
GX6  C13  C12  DOUB  Y  N  19  
GX6  O2   C23  SING  N  N  20  
GX6  C3   C4   DOUB  Y  N  21  
GX6  N5   C23  DOUB  N  N  22  
GX6  C12  C4   SING  Y  N  23  
GX6  C23  N4   SING  N  N  24  
GX6  C4   N1   SING  N  N  25  
GX6  N1   C5   SING  N  N  26  
GX6  O1   C5   DOUB  N  N  27  
GX6  C5   C6   SING  N  N  28  
GX6  C6   C11  DOUB  Y  N  29  
GX6  C6   N2   SING  Y  N  30  
GX6  C11  C10  SING  Y  N  31  
GX6  N2   C7   DOUB  Y  N  32  
GX6  C10  C8   DOUB  Y  N  33  
GX6  C7   C8   SING  Y  N  34  
GX6  C8   C9   SING  N  N  35  
GX6  C9   N3   TRIP  N  N  36  
GX6  C2   H1   SING  N  N  37  
GX6  C3   H2   SING  N  N  38  
GX6  N1   H3   SING  N  N  39  
GX6  C7   H4   SING  N  N  40  
GX6  C10  H5   SING  N  N  41  
GX6  C11  H6   SING  N  N  42  
GX6  C12  H7   SING  N  N  43  
GX6  C17  H8   SING  N  N  44  
GX6  C17  H9   SING  N  N  45  
GX6  C17  H10  SING  N  N  46  
GX6  C19  H11  SING  N  N  47  
GX6  C19  H12  SING  N  N  48  
GX6  C21  H13  SING  N  N  49  
GX6  C21  H14  SING  N  N  50  
GX6  C22  H15  SING  N  N  51  
GX6  C22  H16  SING  N  N  52  
GX6  N4   H17  SING  N  N  53  
GX6  N4   H18  SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GX6  InChI             InChI                 1.03   "InChI=1S/C23H18F3N5O2/c1-2-7-23(21(11-22(25,26)12-21)13-33-20(28)31-23)16-8-15(4-5-17(16)24)30-19(32)18-6-3-14(9-27)10-29-18/h3-6,8,10H,11-13H2,1H3,(H2,28,31)(H,30,32)/t23-/m1/s1"  
GX6  InChIKey          InChI                 1.03   GBDJTQDCHCBNSY-HSZRJFAPSA-N  
GX6  SMILES_CANONICAL  CACTVS                3.385  "CC#C[C@@]1(N=C(N)OCC12CC(F)(F)C2)c3cc(NC(=O)c4ccc(cn4)C#N)ccc3F"  
GX6  SMILES            CACTVS                3.385  "CC#C[C]1(N=C(N)OCC12CC(F)(F)C2)c3cc(NC(=O)c4ccc(cn4)C#N)ccc3F"  
GX6  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC#C[C@]1(C2(CC(C2)(F)F)COC(=N1)N)c3cc(ccc3F)NC(=O)c4ccc(cn4)C#N"  
GX6  SMILES            "OpenEye OEToolkits"  2.0.7  "CC#CC1(C2(CC(C2)(F)F)COC(=N1)N)c3cc(ccc3F)NC(=O)c4ccc(cn4)C#N"  
#
_pdbx_chem_comp_identifier.comp_id          GX6
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[3-[(9~{S})-7-azanyl-2,2-bis(fluoranyl)-9-prop-1-ynyl-6-oxa-8-azaspiro[3.5]non-7-en-9-yl]-4-fluoranyl-phenyl]-5-cyano-pyridine-2-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GX6  "Create component"  2020-10-01  PDBJ  
GX6  "Initial release"   2021-03-31  RCSB  
##
