data_GE6
#

_chem_comp.id                                   GE6
_chem_comp.name                                 "[[(2~{R},3~{S},4~{R},5~{R})-5-(3-aminocarbonyl-5-fluoranyl-2-oxidanylidene-pyrazin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H15 F N3 O15 P3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-08-21
_chem_comp.pdbx_modified_date                   2020-08-28
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       529.157
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    GE6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7CTT
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GE6  C01  C1   C  0  1  N  N  S  123.725  125.808  127.917  -2.620   3.209  -0.341  C01  GE6   1  
GE6  C02  C2   C  0  1  N  N  R  122.934  127.044  128.181  -3.897   2.342  -0.411  C02  GE6   2  
GE6  C03  C3   C  0  1  N  N  R  121.641  126.701  128.034  -3.374   0.931  -0.759  C03  GE6   3  
GE6  C04  C4   C  0  1  N  N  R  122.795  124.893  127.019  -1.477   2.219  -0.655  C04  GE6   4  
GE6  C05  C5   C  0  1  N  N  N  122.846  123.443  127.600  -0.245   2.542   0.193  C05  GE6   5  
GE6  C06  C6   C  0  1  N  N  N  120.996  125.223  129.809  -4.120  -0.164   1.293  C06  GE6   6  
GE6  C07  C7   C  0  1  N  N  N  120.431  124.993  131.060  -4.848  -1.118   1.964  C07  GE6   7  
GE6  C08  C8   C  0  1  N  N  N  120.009  127.258  131.274  -5.671  -1.978  -0.004  C08  GE6   8  
GE6  C09  C9   C  0  1  N  N  N  119.435  128.444  132.126  -6.509  -2.958  -0.719  C09  GE6   9  
GE6  C10  C10  C  0  1  N  N  N  120.575  127.498  130.014  -4.914  -0.967  -0.746  C10  GE6  10  
GE6  F01  F1   F  0  1  N  N  N  120.370  123.725  131.564  -4.795  -1.160   3.313  F01  GE6  11  
GE6  N01  N1   N  0  1  N  N  N  119.458  129.866  131.592  -7.209  -3.879  -0.026  N01  GE6  12  
GE6  N02  N2   N  0  1  N  N  N  121.048  126.473  129.320  -4.154  -0.090  -0.054  N02  GE6  13  
GE6  N03  N3   N  0  1  N  N  N  119.955  126.019  131.753  -5.599  -1.995   1.319  N03  GE6  14  
GE6  O01  O1   O  0  1  N  N  N  121.607  125.367  127.134  -2.004   0.922  -0.302  O01  GE6  15  
GE6  O02  O2   O  0  1  N  N  N  123.315  128.100  127.168  -4.772   2.821  -1.434  O02  GE6  16  
GE6  O03  O3   O  0  1  N  N  N  124.874  126.110  127.215  -2.668   4.250  -1.319  O03  GE6  17  
GE6  O04  O4   O  0  1  N  N  N  118.984  128.213  133.205  -6.569  -2.935  -1.933  O04  GE6  18  
GE6  O05  O5   O  0  1  N  N  N  120.638  128.884  129.472  -4.959  -0.925  -1.964  O05  GE6  19  
GE6  O06  O6   O  0  1  N  N  N  123.372  122.608  126.709   0.814   1.643  -0.143  O06  GE6  20  
GE6  O07  O7   O  0  1  N  N  N  125.318  121.093  127.837   3.156   0.462   0.032  O07  GE6  21  
GE6  O08  O8   O  0  1  N  N  N  123.629  120.079  126.141   2.105   1.600   2.025  O08  GE6  22  
GE6  O09  O9   O  0  1  N  N  N  122.791  120.722  128.390   2.990   3.081   0.183  O09  GE6  23  
GE6  O10  O10  O  0  1  N  N  N  127.028  121.178  130.005   5.183  -1.084  -0.610  O10  GE6  24  
GE6  O11  O11  O  0  1  N  N  N  125.933  119.191  131.119   6.613  -2.735  -2.074  O11  GE6  25  
GE6  O12  O12  O  0  1  N  N  N  128.326  119.117  130.841   7.732  -0.596  -1.032  O12  GE6  26  
GE6  O13  O13  O  0  1  N  N  N  126.331  123.391  128.737   5.405   0.710   1.151  O13  GE6  27  
GE6  O14  O14  O  0  1  N  N  N  124.640  122.176  130.097   4.039  -1.327   1.745  O14  GE6  28  
GE6  O15  O15  O  0  1  N  N  N  126.821  118.841  128.898   6.985  -2.525   0.414  O15  GE6  29  
GE6  P01  P1   P  0  1  N  N  N  123.753  121.101  127.265   2.263   1.694   0.557  P01  GE6  30  
GE6  P02  P2   P  0  1  N  N  N  125.806  121.997  129.190   4.466  -0.288   0.592  P02  GE6  31  
GE6  P03  P3   P  0  1  N  N  N  127.014  119.530  130.231   6.636  -1.752  -0.799  P03  GE6  32  
GE6  H1   H1   H  0  1  N  N  N  123.942  125.285  128.860  -2.498   3.630   0.657  H1   GE6  33  
GE6  H2   H2   H  0  1  N  N  N  123.149  127.414  129.194  -4.407   2.334   0.553  H2   GE6  34  
GE6  H3   H3   H  0  1  N  N  N  121.081  127.480  127.496  -3.418   0.765  -1.835  H3   GE6  35  
GE6  H4   H4   H  0  1  N  N  N  123.177  124.889  125.988  -1.226   2.251  -1.715  H4   GE6  36  
GE6  H5   H5   H  0  1  N  N  N  121.826  123.115  127.847   0.072   3.567  -0.003  H5   GE6  37  
GE6  H6   H6   H  0  1  N  N  N  123.463  123.438  128.511  -0.492   2.434   1.249  H6   GE6  38  
GE6  H7   H7   H  0  1  N  N  N  121.391  124.399  129.233  -3.517   0.537   1.850  H7   GE6  39  
GE6  H10  H10  H  0  1  N  N  N  119.094  130.614  132.146  -7.161  -3.897   0.942  H10  GE6  40  
GE6  H11  H11  H  0  1  N  N  N  119.838  130.054  130.686  -7.761  -4.523  -0.497  H11  GE6  41  
GE6  H12  H12  H  0  1  N  N  N  122.814  128.891  127.331  -5.083   3.726  -1.294  H12  GE6  42  
GE6  H13  H13  H  0  1  N  N  N  125.437  126.659  127.749  -3.404   4.866  -1.202  H13  GE6  43  
GE6  H14  H14  H  0  1  N  N  N  122.320  119.932  128.152   3.127   3.211  -0.765  H14  GE6  44  
GE6  H15  H15  H  0  1  N  N  N  125.330  118.606  130.676   7.457  -3.173  -2.248  H15  GE6  45  
GE6  H16  H16  H  0  1  N  N  N  128.766  118.506  130.262   7.566  -0.048  -1.812  H16  GE6  46  
GE6  H17  H17  H  0  1  N  N  N  124.463  123.103  130.207   3.423  -2.012   1.448  H17  GE6  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GE6  O08  P01  DOUB  N  N   1  
GE6  O06  P01  SING  N  N   2  
GE6  O06  C05  SING  N  N   3  
GE6  C04  O01  SING  N  N   4  
GE6  C04  C05  SING  N  N   5  
GE6  C04  C01  SING  N  N   6  
GE6  O01  C03  SING  N  N   7  
GE6  O02  C02  SING  N  N   8  
GE6  O03  C01  SING  N  N   9  
GE6  P01  O07  SING  N  N  10  
GE6  P01  O09  SING  N  N  11  
GE6  O07  P02  SING  N  N  12  
GE6  C01  C02  SING  N  N  13  
GE6  C03  C02  SING  N  N  14  
GE6  C03  N02  SING  N  N  15  
GE6  O13  P02  DOUB  N  N  16  
GE6  O15  P03  DOUB  N  N  17  
GE6  P02  O10  SING  N  N  18  
GE6  P02  O14  SING  N  N  19  
GE6  N02  C06  SING  N  N  20  
GE6  N02  C10  SING  N  N  21  
GE6  O05  C10  DOUB  N  N  22  
GE6  C06  C07  DOUB  N  N  23  
GE6  O10  P03  SING  N  N  24  
GE6  C10  C08  SING  N  N  25  
GE6  P03  O12  SING  N  N  26  
GE6  P03  O11  SING  N  N  27  
GE6  C07  F01  SING  N  N  28  
GE6  C07  N03  SING  N  N  29  
GE6  C08  N03  DOUB  N  N  30  
GE6  C08  C09  SING  N  N  31  
GE6  N01  C09  SING  N  N  32  
GE6  C09  O04  DOUB  N  N  33  
GE6  C01  H1   SING  N  N  34  
GE6  C02  H2   SING  N  N  35  
GE6  C03  H3   SING  N  N  36  
GE6  C04  H4   SING  N  N  37  
GE6  C05  H5   SING  N  N  38  
GE6  C05  H6   SING  N  N  39  
GE6  C06  H7   SING  N  N  40  
GE6  N01  H10  SING  N  N  41  
GE6  N01  H11  SING  N  N  42  
GE6  O02  H12  SING  N  N  43  
GE6  O03  H13  SING  N  N  44  
GE6  O09  H14  SING  N  N  45  
GE6  O11  H15  SING  N  N  46  
GE6  O12  H16  SING  N  N  47  
GE6  O14  H17  SING  N  N  48  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GE6  InChI             InChI                 1.03   "InChI=1S/C10H15FN3O15P3/c11-4-1-14(9(18)5(13-4)8(12)17)10-7(16)6(15)3(27-10)2-26-31(22,23)29-32(24,25)28-30(19,20)21/h1,3,6-7,10,15-16H,2H2,(H2,12,17)(H,22,23)(H,24,25)(H2,19,20,21)/t3-,6-,7-,10-/m1/s1"  
GE6  InChIKey          InChI                 1.03   UUKPXXBDUCDZDA-KAFVXXCXSA-N  
GE6  SMILES_CANONICAL  CACTVS                3.385  "NC(=O)C1=NC(=CN([C@@H]2O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]2O)C1=O)F"  
GE6  SMILES            CACTVS                3.385  "NC(=O)C1=NC(=CN([CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]2O)C1=O)F"  
GE6  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C1=C(N=C(C(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)C(=O)N)F"  
GE6  SMILES            "OpenEye OEToolkits"  2.0.7  "C1=C(N=C(C(=O)N1C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)C(=O)N)F"  
#
_pdbx_chem_comp_identifier.comp_id          GE6
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "[[(2~{R},3~{S},4~{R},5~{R})-5-(3-aminocarbonyl-5-fluoranyl-2-oxidanylidene-pyrazin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GE6  "Create component"  2020-08-21  PDBJ  
GE6  "Initial release"   2020-09-02  RCSB  
##
