data_BE6
#

_chem_comp.id                                   BE6
_chem_comp.name                                 "(2R,3R,4R,5R)-2,5-BIS[(2,5-DIFLUOROBENZYL)OXY]-3,4-DIHYDROXY-N,N'-BIS[(1S,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YL]HEXANEDIAMIDE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C38 H36 F4 N2 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "HIV-1 INHIBITOR"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-08-10
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       724.695
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    BE6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1W5Y
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BE6  C01   C01   C  0  1  Y  N  N  16.735  22.420   8.878  -4.113  -1.375  -1.129  C01   BE6   1  
BE6  C02   C02   C  0  1  Y  N  N  18.129  22.504   8.448  -3.410  -2.564  -1.176  C02   BE6   2  
BE6  C03   C03   C  0  1  Y  N  N  19.077  21.445   8.678  -3.945  -3.659  -1.832  C03   BE6   3  
BE6  C04   C04   C  0  1  Y  N  N  18.671  20.226   9.366  -5.184  -3.564  -2.441  C04   BE6   4  
BE6  C05   C05   C  0  1  Y  N  N  17.279  20.100   9.814  -5.887  -2.376  -2.395  C05   BE6   5  
BE6  C06   C06   C  0  1  Y  N  N  16.336  21.173   9.572  -5.355  -1.282  -1.735  C06   BE6   6  
BE6  C07   C07   C  0  1  Y  N  N  10.089  24.113   2.255   4.122  -1.362   1.119  C07   BE6   7  
BE6  C08   C08   C  0  1  Y  N  N   8.964  23.265   2.651   5.363  -1.267   1.724  C08   BE6   8  
BE6  C09   C09   C  0  1  Y  N  N   7.591  23.829   2.667   5.902  -2.364   2.375  C09   BE6   9  
BE6  C10   C10   C  0  1  Y  N  N   7.377  25.246   2.281   5.205  -3.557   2.411  C10   BE6  10  
BE6  C11   C11   C  0  1  Y  N  N   8.544  26.066   1.889   3.966  -3.654   1.800  C11   BE6  11  
BE6  C12   C12   C  0  1  Y  N  N   9.853  25.496   1.883   3.425  -2.555   1.154  C12   BE6  12  
BE6  C13   C13   C  0  1  N  N  N  11.526  23.625   2.223   3.534  -0.167   0.415  C13   BE6  13  
BE6  O14   O14   O  0  1  N  N  N  12.090  23.309   3.524   2.260  -0.515  -0.130  O14   BE6  14  
BE6  C15   C15   C  0  1  N  N  R  12.132  24.402   4.579   1.756   0.653  -0.781  C15   BE6  15  
BE6  C16   C16   C  0  1  N  N  R  13.162  24.129   5.664   0.227   0.648  -0.726  C16   BE6  16  
BE6  C17   C17   C  0  1  N  N  R  14.472  23.789   5.058  -0.230   0.640   0.733  C17   BE6  17  
BE6  C18   C18   C  0  1  N  N  R  15.360  23.057   6.141  -1.759   0.636   0.788  C18   BE6  18  
BE6  C19   C19   C  0  1  N  N  N  15.424  21.557   5.940  -2.210   0.628   2.226  C19   BE6  19  
BE6  O20   O20   O  0  1  N  N  N  14.415  20.867   6.160  -2.890  -0.284   2.644  O20   BE6  20  
BE6  N21   N21   N  0  1  N  N  N  16.595  20.959   5.545  -1.857   1.636   3.048  N21   BE6  21  
BE6  O22   O22   O  0  1  N  N  N  14.853  23.343   7.502  -2.256  -0.528   0.127  O22   BE6  22  
BE6  C23   C23   C  0  1  N  N  N  15.824  23.621   8.553  -3.532  -0.183  -0.415  C23   BE6  23  
BE6  O24   O24   O  0  1  N  N  N  15.076  25.032   4.617   0.266   1.806   1.394  O24   BE6  24  
BE6  O25   O25   O  0  1  N  N  N  13.382  25.287   6.546  -0.276   1.817  -1.377  O25   BE6  25  
BE6  C26   C26   C  0  1  N  N  N  10.899  24.482   5.432   2.207   0.661  -2.219  C26   BE6  26  
BE6  O27   O27   O  0  1  N  N  N  10.505  23.443   6.010   2.892  -0.244  -2.644  O27   BE6  27  
BE6  N28   N28   N  0  1  N  N  N  10.262  25.700   5.536   1.849   1.674  -3.032  N28   BE6  28  
BE6  C29   C29   C  0  1  N  N  S   9.061  25.934   6.319   2.287   1.682  -4.430  C29   BE6  29  
BE6  C30   C30   C  0  1  Y  N  N   9.396  26.681   7.558   1.253   1.002  -5.310  C30   BE6  30  
BE6  C31   C31   C  0  1  Y  N  N   8.317  27.581   7.919   1.057   1.743  -6.461  C31   BE6  31  
BE6  C32   C32   C  0  1  Y  N  N  10.584  26.583   8.396   0.542  -0.170  -5.117  C32   BE6  32  
BE6  C33   C33   C  0  1  Y  N  N  10.672  27.412   9.617  -0.359  -0.601  -6.069  C33   BE6  33  
BE6  C34   C34   C  0  1  Y  N  N   9.575  28.305   9.957  -0.555   0.139  -7.220  C34   BE6  34  
BE6  C35   C35   C  0  1  N  N  R   7.943  26.837   5.718   2.373   3.128  -4.962  C35   BE6  35  
BE6  O36   O36   O  0  1  N  N  N   8.562  27.842   4.885   1.469   3.982  -4.258  O36   BE6  36  
BE6  C37   C37   C  0  1  Y  N  N   8.389  28.405   9.120   0.152   1.309  -7.414  C37   BE6  37  
BE6  C38   C38   C  0  1  N  N  N   7.228  27.513   6.914   1.943   2.970  -6.435  C38   BE6  38  
BE6  C39   C39   C  0  1  N  N  S  16.712  19.531   5.363  -2.295   1.629   4.446  C39   BE6  39  
BE6  C40   C40   C  0  1  Y  N  N  16.606  19.081   3.908  -1.246   0.978   5.322  C40   BE6  40  
BE6  C41   C41   C  0  1  Y  N  N  17.537  18.012   3.653  -1.071   1.727   6.473  C41   BE6  41  
BE6  C42   C42   C  0  1  Y  N  N  15.748  19.565   2.840  -0.501  -0.171   5.129  C42   BE6  42  
BE6  C43   C43   C  0  1  Y  N  N  15.846  18.948   1.498   0.413  -0.575   6.081  C43   BE6  43  
BE6  C44   C44   C  0  1  Y  N  N  16.797  17.871   1.277   0.587   0.170   7.231  C44   BE6  44  
BE6  C45   C45   C  0  1  N  N  R  18.076  18.951   5.777  -2.427   3.073   4.974  C45   BE6  45  
BE6  O46   O46   O  0  1  N  N  N  19.097  19.950   5.499  -1.552   3.954   4.267  O46   BE6  46  
BE6  C47   C47   C  0  1  Y  N  N  17.655  17.384   2.337  -0.153   1.319   7.426  C47   BE6  47  
BE6  C48   C48   C  0  1  N  N  N  18.299  17.709   4.912  -1.992   2.928   6.448  C48   BE6  48  
BE6  F49   F49   F  0  1  N  N  N   8.474  27.399   1.512   3.285  -4.820   1.835  F49   BE6  49  
BE6  F50   F50   F  0  1  N  N  N  20.278  21.561   8.282  -3.257  -4.821  -1.877  F50   BE6  50  
BE6  F51   F51   F  0  1  N  N  N  14.876  21.072  10.016  -6.043  -0.119  -1.689  F51   BE6  51  
BE6  F52   F52   F  0  1  N  N  N   9.156  22.122   2.965   6.044  -0.101   1.690  F52   BE6  52  
BE6  H02   H02   H  0  1  N  N  N  18.469  23.415   7.927  -2.443  -2.638  -0.701  H02   BE6  53  
BE6  H04   H04   H  0  1  N  N  N  19.396  19.414   9.547  -5.602  -4.419  -2.953  H04   BE6  54  
BE6  H05   H05   H  0  1  N  N  N  16.950  19.186  10.336  -6.854  -2.302  -2.871  H05   BE6  55  
BE6  H09   H09   H  0  1  N  N  N   6.735  23.199   2.964   6.868  -2.289   2.852  H09   BE6  56  
BE6  H10   H10   H  0  1  N  N  N   6.363  25.681   2.286   5.627  -4.414   2.915  H10   BE6  57  
BE6  H12   H12   H  0  1  N  N  N  10.710  26.125   1.587   2.459  -2.631   0.678  H12   BE6  58  
BE6  H131  1H13  H  0  0  N  N  N  12.172  24.361   1.690   4.200   0.145  -0.388  H131  BE6  59  
BE6  H132  2H13  H  0  0  N  N  N  11.622  22.751   1.537   3.414   0.650   1.126  H132  BE6  60  
BE6  H15   H15   H  0  1  N  N  N  12.332  25.389   4.101   2.135   1.542  -0.277  H15   BE6  61  
BE6  H16   H16   H  0  1  N  N  N  12.816  23.267   6.281  -0.151  -0.240  -1.230  H16   BE6  62  
BE6  H17   H17   H  0  1  N  N  N  14.317  23.116   4.183   0.153  -0.250   1.230  H17   BE6  63  
BE6  H18   H18   H  0  1  N  N  N  16.397  23.460   6.067  -2.143   1.527   0.292  H18   BE6  64  
BE6  H21   H21   H  0  1  N  N  N  17.412  21.545   5.374  -1.313   2.367   2.714  H21   BE6  65  
BE6  H231  1H23  H  0  0  N  N  N  16.431  24.522   8.302  -4.200   0.118   0.391  H231  BE6  66  
BE6  H232  2H23  H  0  0  N  N  N  15.315  23.992   9.473  -3.416   0.641  -1.118  H232  BE6  67  
BE6  H24   H24   H  0  1  N  N  N  15.915  24.814   4.229  -0.095   2.569   0.925  H24   BE6  68  
BE6  H25   H25   H  0  1  N  N  N  14.025  25.117   7.224   0.082   2.578  -0.901  H25   BE6  69  
BE6  H28   H28   H  0  1  N  N  N  10.661  26.490   5.029   1.301   2.398  -2.692  H28   BE6  70  
BE6  H29   H29   H  0  1  N  N  N   8.617  24.951   6.600   3.252   1.183  -4.526  H29   BE6  71  
BE6  H32   H32   H  0  1  N  N  N  11.406  25.900   8.123   0.695  -0.750  -4.218  H32   BE6  72  
BE6  H33   H33   H  0  1  N  N  N  11.563  27.354  10.265  -0.912  -1.516  -5.915  H33   BE6  73  
BE6  H34   H34   H  0  1  N  N  N   9.644  28.920  10.870  -1.261  -0.196  -7.965  H34   BE6  74  
BE6  H35   H35   H  0  1  N  N  N   7.223  26.226   5.125   3.393   3.506  -4.894  H35   BE6  75  
BE6  H36   H36   H  0  1  N  N  N   7.880  28.393   4.518   1.538   4.857  -4.663  H36   BE6  76  
BE6  H37   H37   H  0  1  N  N  N   7.565  29.087   9.387  -0.001   1.887  -8.313  H37   BE6  77  
BE6  H381  1H38  H  0  0  N  N  N   6.297  27.005   7.258   1.384   3.847  -6.762  H381  BE6  78  
BE6  H382  2H38  H  0  0  N  N  N   6.735  28.486   6.683   2.816   2.819  -7.070  H382  BE6  79  
BE6  H39   H39   H  0  1  N  N  N  15.913  19.027   5.954  -3.246   1.104   4.541  H39   BE6  80  
BE6  H42   H42   H  0  1  N  N  N  15.032  20.383   3.027  -0.637  -0.755   4.231  H42   BE6  81  
BE6  H43   H43   H  0  1  N  N  N  15.204  19.302   0.674   0.991  -1.474   5.927  H43   BE6  82  
BE6  H44   H44   H  0  1  N  N  N  16.867  17.413   0.276   1.302  -0.144   7.977  H44   BE6  83  
BE6  H45   H45   H  0  1  N  N  N  18.076  18.681   6.859  -3.458   3.418   4.907  H45   BE6  84  
BE6  H46   H46   H  0  1  N  N  N  19.939  19.592   5.755  -1.680   4.836   4.641  H46   BE6  85  
BE6  H47   H47   H  0  1  N  N  N  18.374  16.567   2.158  -0.016   1.902   8.325  H47   BE6  86  
BE6  H481  1H48  H  0  0  N  N  N  18.015  16.749   5.403  -1.458   3.821   6.775  H481  BE6  87  
BE6  H482  2H48  H  0  0  N  N  N  19.371  17.446   4.750  -2.860   2.752   7.083  H482  BE6  88  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BE6  C01  C02   DOUB  Y  N   1  
BE6  C01  C06   SING  Y  N   2  
BE6  C01  C23   SING  N  N   3  
BE6  C02  C03   SING  Y  N   4  
BE6  C02  H02   SING  N  N   5  
BE6  C03  C04   DOUB  Y  N   6  
BE6  C03  F50   SING  N  N   7  
BE6  C04  C05   SING  Y  N   8  
BE6  C04  H04   SING  N  N   9  
BE6  C05  C06   DOUB  Y  N  10  
BE6  C05  H05   SING  N  N  11  
BE6  C06  F51   SING  N  N  12  
BE6  C07  C08   DOUB  Y  N  13  
BE6  C07  C12   SING  Y  N  14  
BE6  C07  C13   SING  N  N  15  
BE6  C08  C09   SING  Y  N  16  
BE6  C08  F52   SING  N  N  17  
BE6  C09  C10   DOUB  Y  N  18  
BE6  C09  H09   SING  N  N  19  
BE6  C10  C11   SING  Y  N  20  
BE6  C10  H10   SING  N  N  21  
BE6  C11  C12   DOUB  Y  N  22  
BE6  C11  F49   SING  N  N  23  
BE6  C12  H12   SING  N  N  24  
BE6  C13  O14   SING  N  N  25  
BE6  C13  H131  SING  N  N  26  
BE6  C13  H132  SING  N  N  27  
BE6  O14  C15   SING  N  N  28  
BE6  C15  C16   SING  N  N  29  
BE6  C15  C26   SING  N  N  30  
BE6  C15  H15   SING  N  N  31  
BE6  C16  C17   SING  N  N  32  
BE6  C16  O25   SING  N  N  33  
BE6  C16  H16   SING  N  N  34  
BE6  C17  C18   SING  N  N  35  
BE6  C17  O24   SING  N  N  36  
BE6  C17  H17   SING  N  N  37  
BE6  C18  C19   SING  N  N  38  
BE6  C18  O22   SING  N  N  39  
BE6  C18  H18   SING  N  N  40  
BE6  C19  O20   DOUB  N  N  41  
BE6  C19  N21   SING  N  N  42  
BE6  N21  C39   SING  N  N  43  
BE6  N21  H21   SING  N  N  44  
BE6  O22  C23   SING  N  N  45  
BE6  C23  H231  SING  N  N  46  
BE6  C23  H232  SING  N  N  47  
BE6  O24  H24   SING  N  N  48  
BE6  O25  H25   SING  N  N  49  
BE6  C26  O27   DOUB  N  N  50  
BE6  C26  N28   SING  N  N  51  
BE6  N28  C29   SING  N  N  52  
BE6  N28  H28   SING  N  N  53  
BE6  C29  C30   SING  N  N  54  
BE6  C29  C35   SING  N  N  55  
BE6  C29  H29   SING  N  N  56  
BE6  C30  C31   DOUB  Y  N  57  
BE6  C30  C32   SING  Y  N  58  
BE6  C31  C37   SING  Y  N  59  
BE6  C31  C38   SING  N  N  60  
BE6  C32  C33   DOUB  Y  N  61  
BE6  C32  H32   SING  N  N  62  
BE6  C33  C34   SING  Y  N  63  
BE6  C33  H33   SING  N  N  64  
BE6  C34  C37   DOUB  Y  N  65  
BE6  C34  H34   SING  N  N  66  
BE6  C35  O36   SING  N  N  67  
BE6  C35  C38   SING  N  N  68  
BE6  C35  H35   SING  N  N  69  
BE6  O36  H36   SING  N  N  70  
BE6  C37  H37   SING  N  N  71  
BE6  C38  H381  SING  N  N  72  
BE6  C38  H382  SING  N  N  73  
BE6  C39  C40   SING  N  N  74  
BE6  C39  C45   SING  N  N  75  
BE6  C39  H39   SING  N  N  76  
BE6  C40  C41   DOUB  Y  N  77  
BE6  C40  C42   SING  Y  N  78  
BE6  C41  C47   SING  Y  N  79  
BE6  C41  C48   SING  N  N  80  
BE6  C42  C43   DOUB  Y  N  81  
BE6  C42  H42   SING  N  N  82  
BE6  C43  C44   SING  Y  N  83  
BE6  C43  H43   SING  N  N  84  
BE6  C44  C47   DOUB  Y  N  85  
BE6  C44  H44   SING  N  N  86  
BE6  C45  O46   SING  N  N  87  
BE6  C45  C48   SING  N  N  88  
BE6  C45  H45   SING  N  N  89  
BE6  O46  H46   SING  N  N  90  
BE6  C47  H47   SING  N  N  91  
BE6  C48  H481  SING  N  N  92  
BE6  C48  H482  SING  N  N  93  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BE6  SMILES            ACDLabs               10.04  "Fc1cc(c(F)cc1)COC(C(=O)NC3c2ccccc2CC3O)C(O)C(O)C(OCc4cc(F)ccc4F)C(=O)NC6c5ccccc5CC6O"  
BE6  SMILES_CANONICAL  CACTVS                3.341  "O[C@@H]1Cc2ccccc2[C@@H]1NC(=O)[C@H](OCc3cc(F)ccc3F)[C@H](O)[C@@H](O)[C@@H](OCc4cc(F)ccc4F)C(=O)N[C@@H]5[C@H](O)Cc6ccccc56"  
BE6  SMILES            CACTVS                3.341  "O[CH]1Cc2ccccc2[CH]1NC(=O)[CH](OCc3cc(F)ccc3F)[CH](O)[CH](O)[CH](OCc4cc(F)ccc4F)C(=O)N[CH]5[CH](O)Cc6ccccc56"  
BE6  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1ccc2c(c1)C[C@H]([C@H]2NC(=O)[C@@H]([C@@H]([C@H]([C@H](C(=O)N[C@H]3c4ccccc4C[C@H]3O)OCc5cc(ccc5F)F)O)O)OCc6cc(ccc6F)F)O"  
BE6  SMILES            "OpenEye OEToolkits"  1.5.0  "c1ccc2c(c1)CC(C2NC(=O)C(C(C(C(C(=O)NC3c4ccccc4CC3O)OCc5cc(ccc5F)F)O)O)OCc6cc(ccc6F)F)O"  
BE6  InChI             InChI                 1.03   "InChI=1S/C38H36F4N2O8/c39-23-9-11-27(41)21(13-23)17-51-35(37(49)43-31-25-7-3-1-5-19(25)15-29(31)45)33(47)34(48)36(52-18-22-14-24(40)10-12-28(22)42)38(50)44-32-26-8-4-2-6-20(26)16-30(32)46/h1-14,29-36,45-48H,15-18H2,(H,43,49)(H,44,50)/t29-,30-,31+,32+,33-,34-,35-,36-/m1/s1"  
BE6  InChIKey          InChI                 1.03   MHRYDJWKKUNWJY-JQFCFGFHSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BE6  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2R,3R,4R,5R)-2,5-bis[(2,5-difluorobenzyl)oxy]-3,4-dihydroxy-N,N'-bis[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]hexanediamide (non-preferred name)"  
BE6  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,3R,4R,5R)-2,5-bis[(2,5-difluorophenyl)methoxy]-3,4-dihydroxy-N,N'-bis[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]hexanediamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BE6  "Create component"   2004-08-10  EBI   
BE6  "Modify descriptor"  2011-06-04  RCSB  
BE6  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     BE6
_pdbx_chem_comp_synonyms.name        "HIV-1 INHIBITOR"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
