data_AZ6
# 
_chem_comp.id                                    AZ6 
_chem_comp.name                                  "3-[({2-[4-({[(4S)-4-methyl-2,5-dioxoimidazolidin-4-yl]methyl}sulfonyl)piperazin-1-yl]pyrimidin-5-yl}oxy)methyl]benzonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H23 N7 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-12-20 
_chem_comp.pdbx_modified_date                    2014-02-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        485.516 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     AZ6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4JPA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
AZ6 C1  C1  C 0 1 N N N 37.323 -14.293 21.568 -6.726 0.075  -2.054 C1  AZ6 1  
AZ6 C2  C2  C 0 1 N N S 38.616 -13.997 20.831 -6.742 0.015  -0.525 C2  AZ6 2  
AZ6 C3  C3  C 0 1 N N N 39.692 -14.992 21.215 -5.445 0.590  0.048  C3  AZ6 3  
AZ6 O4  O4  O 0 1 N N N 38.809 -10.769 19.563 -8.554 -2.370 1.165  O4  AZ6 4  
AZ6 O5  O5  O 0 1 N N N 38.067 -15.127 18.777 -8.203 1.931  -0.102 O5  AZ6 5  
AZ6 N6  N6  N 0 1 N N N 38.996 -12.623 20.920 -6.944 -1.369 -0.064 N6  AZ6 6  
AZ6 C7  C7  C 0 1 N N N 42.001 -12.780 18.847 -2.177 -0.093 1.363  C7  AZ6 7  
AZ6 C8  C8  C 0 1 Y N N 43.275 -13.738 15.534 1.346  0.761  0.686  C8  AZ6 8  
AZ6 C9  C9  C 0 1 Y N N 43.494 -14.528 13.394 3.285  0.338  1.852  C9  AZ6 9  
AZ6 C10 C10 C 0 1 Y N N 44.437 -13.573 13.108 4.014  0.523  0.683  C10 AZ6 10 
AZ6 C11 C11 C 0 1 N N N 44.910 -14.619 11.103 6.037  0.610  -0.565 C11 AZ6 11 
AZ6 C12 C12 C 0 1 Y N N 45.744 -14.465 9.876  7.522  0.437  -0.373 C12 AZ6 12 
AZ6 C13 C13 C 0 1 Y N N 45.164 -14.384 8.625  8.305  1.525  -0.031 C13 AZ6 13 
AZ6 C14 C14 C 0 1 Y N N 45.951 -14.240 7.504  9.668  1.374  0.152  C14 AZ6 14 
AZ6 C15 C15 C 0 1 Y N N 47.324 -14.180 7.624  10.256 0.136  -0.006 C15 AZ6 15 
AZ6 C16 C16 C 0 1 Y N N 47.899 -14.260 8.875  9.471  -0.967 -0.352 C16 AZ6 16 
AZ6 C19 C19 C 0 1 Y N N 44.747 -12.709 14.129 3.326  0.829  -0.486 C19 AZ6 17 
AZ6 C20 C20 C 0 1 N N N 38.747 -11.978 19.741 -8.091 -1.377 0.639  C20 AZ6 18 
AZ6 C21 C21 C 0 1 N N N 38.329 -14.083 19.362 -7.944 0.754  0.029  C21 AZ6 19 
AZ6 S1  S1  S 0 1 N N N 41.376 -14.514 20.890 -4.030 -0.331 -0.615 S1  AZ6 20 
AZ6 O1  O1  O 0 1 N N N 41.692 -13.360 21.707 -4.016 -1.658 -0.106 O1  AZ6 21 
AZ6 O2  O2  O 0 1 N N N 42.115 -15.745 21.077 -3.877 -0.078 -2.005 O2  AZ6 22 
AZ6 N1  N1  N 0 1 N N N 41.401 -14.096 19.225 -2.708 0.386  0.078  N1  AZ6 23 
AZ6 C4  C4  C 0 1 N N N 41.310 -15.175 18.197 -2.036 1.520  -0.574 C4  AZ6 24 
AZ6 C5  C5  C 0 1 N N N 42.522 -15.187 17.297 -0.536 1.215  -0.653 C5  AZ6 25 
AZ6 N2  N2  N 0 1 N N N 42.646 -13.836 16.793 -0.035 0.884  0.688  N2  AZ6 26 
AZ6 C6  C6  C 0 1 N N N 43.075 -12.869 17.779 -0.672 -0.334 1.208  C6  AZ6 27 
AZ6 N3  N3  N 0 1 Y N N 42.909 -14.627 14.595 1.968  0.463  1.816  N3  AZ6 28 
AZ6 O3  O3  O 0 1 N N N 45.073 -13.434 11.874 5.369  0.403  0.681  O3  AZ6 29 
AZ6 C17 C17 C 0 1 N N N 49.308 -14.202 9.028  10.074 -2.255 -0.518 C17 AZ6 30 
AZ6 N4  N4  N 0 1 N N N 50.464 -14.170 9.121  10.553 -3.276 -0.650 N4  AZ6 31 
AZ6 C18 C18 C 0 1 Y N N 47.115 -14.402 9.996  8.097  -0.807 -0.535 C18 AZ6 32 
AZ6 N5  N5  N 0 1 Y N N 44.183 -12.768 15.337 2.008  0.939  -0.447 N5  AZ6 33 
AZ6 N7  N7  N 0 1 N N N 38.415 -12.878 18.815 -8.664 -0.170 0.695  N7  AZ6 34 
AZ6 H1  H1  H 0 1 N N N 37.498 -14.238 22.653 -7.672 -0.303 -2.443 H1  AZ6 35 
AZ6 H2  H2  H 0 1 N N N 36.560 -13.554 21.282 -6.589 1.108  -2.375 H2  AZ6 36 
AZ6 H3  H3  H 0 1 N N N 36.973 -15.302 21.304 -5.907 -0.535 -2.433 H3  AZ6 37 
AZ6 H4  H4  H 0 1 N N N 39.602 -15.181 22.295 -5.359 1.640  -0.232 H4  AZ6 38 
AZ6 H5  H5  H 0 1 N N N 39.497 -15.923 20.663 -5.458 0.503  1.134  H5  AZ6 39 
AZ6 H6  H6  H 0 1 N N N 39.390 -12.193 21.732 -6.363 -2.128 -0.234 H6  AZ6 40 
AZ6 H7  H7  H 0 1 N N N 42.447 -12.333 19.748 -2.350 0.659  2.134  H7  AZ6 41 
AZ6 H8  H8  H 0 1 N N N 41.197 -12.129 18.474 -2.673 -1.023 1.641  H8  AZ6 42 
AZ6 H9  H9  H 0 1 N N N 43.212 -15.227 12.621 3.787  0.095  2.777  H9  AZ6 43 
AZ6 H10 H10 H 0 1 N N N 43.853 -14.746 10.827 5.832  1.618  -0.924 H10 AZ6 44 
AZ6 H11 H11 H 0 1 N N N 45.246 -15.493 11.680 5.678  -0.116 -1.295 H11 AZ6 45 
AZ6 H12 H12 H 0 1 N N N 44.090 -14.434 8.526  7.850  2.496  0.095  H12 AZ6 46 
AZ6 H13 H13 H 0 1 N N N 45.492 -14.174 6.529  10.274 2.227  0.419  H13 AZ6 47 
AZ6 H14 H14 H 0 1 N N N 47.943 -14.071 6.746  11.320 0.020  0.137  H14 AZ6 48 
AZ6 H15 H15 H 0 1 N N N 45.485 -11.942 13.945 3.860  0.979  -1.412 H15 AZ6 49 
AZ6 H16 H16 H 0 1 N N N 40.412 -15.010 17.584 -2.435 1.654  -1.579 H16 AZ6 50 
AZ6 H17 H17 H 0 1 N N N 41.233 -16.147 18.706 -2.198 2.427  0.009  H17 AZ6 51 
AZ6 H18 H18 H 0 1 N N N 42.377 -15.895 16.467 -0.371 0.371  -1.322 H18 AZ6 52 
AZ6 H19 H19 H 0 1 N N N 43.420 -15.468 17.866 -0.007 2.089  -1.033 H19 AZ6 53 
AZ6 H20 H20 H 0 1 N N N 44.024 -13.192 18.231 -0.241 -0.583 2.178  H20 AZ6 54 
AZ6 H21 H21 H 0 1 N N N 43.211 -11.886 17.304 -0.505 -1.157 0.513  H21 AZ6 55 
AZ6 H22 H22 H 0 1 N N N 47.575 -14.464 10.971 7.484  -1.656 -0.799 H22 AZ6 56 
AZ6 H23 H23 H 0 1 N N N 38.254 -12.674 17.849 -9.496 0.018  1.157  H23 AZ6 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
AZ6 C14 C15 DOUB Y N 1  
AZ6 C14 C13 SING Y N 2  
AZ6 C15 C16 SING Y N 3  
AZ6 C13 C12 DOUB Y N 4  
AZ6 C16 C17 SING N N 5  
AZ6 C16 C18 DOUB Y N 6  
AZ6 C17 N4  TRIP N N 7  
AZ6 C12 C18 SING Y N 8  
AZ6 C12 C11 SING N N 9  
AZ6 C11 O3  SING N N 10 
AZ6 O3  C10 SING N N 11 
AZ6 C10 C9  DOUB Y N 12 
AZ6 C10 C19 SING Y N 13 
AZ6 C9  N3  SING Y N 14 
AZ6 C19 N5  DOUB Y N 15 
AZ6 N3  C8  DOUB Y N 16 
AZ6 N5  C8  SING Y N 17 
AZ6 C8  N2  SING N N 18 
AZ6 N2  C5  SING N N 19 
AZ6 N2  C6  SING N N 20 
AZ6 C5  C4  SING N N 21 
AZ6 C6  C7  SING N N 22 
AZ6 C4  N1  SING N N 23 
AZ6 O5  C21 DOUB N N 24 
AZ6 N7  C21 SING N N 25 
AZ6 N7  C20 SING N N 26 
AZ6 C7  N1  SING N N 27 
AZ6 N1  S1  SING N N 28 
AZ6 C21 C2  SING N N 29 
AZ6 O4  C20 DOUB N N 30 
AZ6 C20 N6  SING N N 31 
AZ6 C2  N6  SING N N 32 
AZ6 C2  C3  SING N N 33 
AZ6 C2  C1  SING N N 34 
AZ6 S1  O2  DOUB N N 35 
AZ6 S1  C3  SING N N 36 
AZ6 S1  O1  DOUB N N 37 
AZ6 C1  H1  SING N N 38 
AZ6 C1  H2  SING N N 39 
AZ6 C1  H3  SING N N 40 
AZ6 C3  H4  SING N N 41 
AZ6 C3  H5  SING N N 42 
AZ6 N6  H6  SING N N 43 
AZ6 C7  H7  SING N N 44 
AZ6 C7  H8  SING N N 45 
AZ6 C9  H9  SING N N 46 
AZ6 C11 H10 SING N N 47 
AZ6 C11 H11 SING N N 48 
AZ6 C13 H12 SING N N 49 
AZ6 C14 H13 SING N N 50 
AZ6 C15 H14 SING N N 51 
AZ6 C19 H15 SING N N 52 
AZ6 C4  H16 SING N N 53 
AZ6 C4  H17 SING N N 54 
AZ6 C5  H18 SING N N 55 
AZ6 C5  H19 SING N N 56 
AZ6 C6  H20 SING N N 57 
AZ6 C6  H21 SING N N 58 
AZ6 C18 H22 SING N N 59 
AZ6 N7  H23 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
AZ6 SMILES           ACDLabs              12.01 "O=S(=O)(N3CCN(c2ncc(OCc1cccc(C#N)c1)cn2)CC3)CC4(C(=O)NC(=O)N4)C"                                                                                                                          
AZ6 InChI            InChI                1.03  "InChI=1S/C21H23N7O5S/c1-21(18(29)25-20(30)26-21)14-34(31,32)28-7-5-27(6-8-28)19-23-11-17(12-24-19)33-13-16-4-2-3-15(9-16)10-22/h2-4,9,11-12H,5-8,13-14H2,1H3,(H2,25,26,29,30)/t21-/m1/s1" 
AZ6 InChIKey         InChI                1.03  PKCWEIUDUFDFAG-OAQYLSRUSA-N                                                                                                                                                                
AZ6 SMILES_CANONICAL CACTVS               3.385 "C[C@]1(C[S](=O)(=O)N2CCN(CC2)c3ncc(OCc4cccc(c4)C#N)cn3)NC(=O)NC1=O"                                                                                                                       
AZ6 SMILES           CACTVS               3.385 "C[C]1(C[S](=O)(=O)N2CCN(CC2)c3ncc(OCc4cccc(c4)C#N)cn3)NC(=O)NC1=O"                                                                                                                        
AZ6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@]1(C(=O)NC(=O)N1)CS(=O)(=O)N2CCN(CC2)c3ncc(cn3)OCc4cccc(c4)C#N"                                                                                                                       
AZ6 SMILES           "OpenEye OEToolkits" 1.7.6 "CC1(C(=O)NC(=O)N1)CS(=O)(=O)N2CCN(CC2)c3ncc(cn3)OCc4cccc(c4)C#N"                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
AZ6 "SYSTEMATIC NAME" ACDLabs              12.01 "3-[({2-[4-({[(4S)-4-methyl-2,5-dioxoimidazolidin-4-yl]methyl}sulfonyl)piperazin-1-yl]pyrimidin-5-yl}oxy)methyl]benzonitrile"                 
AZ6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "3-[[2-[4-[[(4S)-4-methyl-2,5-bis(oxidanylidene)imidazolidin-4-yl]methylsulfonyl]piperazin-1-yl]pyrimidin-5-yl]oxymethyl]benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
AZ6 "Create component" 2013-12-20 PDBJ 
AZ6 "Initial release"  2014-03-05 RCSB 
# 
