data_A1IB6
# 
_chem_comp.id                                    A1IB6 
_chem_comp.name                                  "~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-pyridin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-3-cyano-~{N}-ethyl-4-methoxy-benzenesulfonamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H27 N7 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-05-20 
_chem_comp.pdbx_modified_date                    2024-08-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        589.622 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1IB6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9FEH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1IB6 C2   C1  C 0 1 Y N N N N N 10.759 52.129 -13.477 -6.117 -1.791 0.166  C2   A1IB6 1  
A1IB6 N3   N1  N 0 1 Y N N N N N 11.142 53.386 -13.164 -6.396 -3.086 0.286  N3   A1IB6 2  
A1IB6 C4   C2  C 0 1 Y N N N N N 10.303 54.153 -12.465 -5.431 -3.987 0.338  C4   A1IB6 3  
A1IB6 C6   C3  C 0 1 Y N N N N N 8.725  52.603 -12.320 -3.779 -2.395 0.154  C6   A1IB6 4  
A1IB6 C8   C4  C 0 1 Y N N N N N 8.710  50.477 -13.132 -4.065 -0.122 -0.036 C8   A1IB6 5  
A1IB6 C9   C5  C 0 1 N N N N N N 9.100  49.267 -13.804 -4.656 1.179  -0.133 C9   A1IB6 6  
A1IB6 C10  C6  C 0 1 N N N N N N 9.462  48.288 -14.391 -5.141 2.245  -0.212 C10  A1IB6 7  
A1IB6 C11  C7  C 0 1 Y N N N N N 9.835  47.124 -15.147 -5.733 3.546  -0.309 C11  A1IB6 8  
A1IB6 C12  C8  C 0 1 Y N N N N N 8.887  46.181 -15.547 -7.121 3.699  -0.284 C12  A1IB6 9  
A1IB6 C14  C9  C 0 1 Y N N N N N 10.469 44.909 -16.607 -6.931 5.986  -0.488 C14  A1IB6 10 
A1IB6 C15  C10 C 0 1 Y N N N N N 11.479 45.782 -16.260 -5.549 5.920  -0.515 C15  A1IB6 11 
A1IB6 C16  C11 C 0 1 Y N N N N N 11.156 46.905 -15.519 -4.928 4.688  -0.425 C16  A1IB6 12 
A1IB6 C17  C12 C 0 1 Y N N N N N 7.540  50.715 -12.464 -2.736 -0.416 -0.047 C17  A1IB6 13 
A1IB6 C20  C13 C 0 1 N N R N N N 5.095  52.452 -11.613 -0.875 -2.922 -1.334 C20  A1IB6 14 
A1IB6 C22  C14 C 0 1 N N S N N N 4.311  52.516 -10.301 0.667  -3.003 -1.234 C22  A1IB6 15 
A1IB6 C24  C15 C 0 1 N N R N N N 5.262  51.862 -9.297  1.017  -2.094 -0.039 C24  A1IB6 16 
A1IB6 C25  C16 C 0 1 N N N N N N 4.966  50.430 -8.911  1.963  -0.980 -0.492 C25  A1IB6 17 
A1IB6 C30  C17 C 0 1 Y N N N N N 2.753  47.878 -7.603  5.113  0.381  0.718  C30  A1IB6 18 
A1IB6 C31  C18 C 0 1 Y N N N N N 2.165  47.609 -6.377  5.477  1.552  1.361  C31  A1IB6 19 
A1IB6 C19  C19 C 0 1 N N R N N N 6.528  52.600 -11.112 -1.268 -2.447 0.089  C19  A1IB6 20 
A1IB6 C27  C20 C 0 1 N N N N N N 4.135  50.664 -6.549  1.635  0.882  1.200  C27  A1IB6 21 
A1IB6 C28  C21 C 0 1 N N N N N N 3.694  52.042 -6.179  0.748  0.384  2.342  C28  A1IB6 22 
A1IB6 C32  C22 C 0 1 Y N N N N N 2.280  46.345 -5.829  6.464  2.362  0.832  C32  A1IB6 23 
A1IB6 C33  C23 C 0 1 Y N N N N N 2.975  45.355 -6.497  7.097  2.005  -0.348 C33  A1IB6 24 
A1IB6 C35  C24 C 0 1 N N N N N N 2.357  43.712 -4.863  8.385  3.992  -0.147 C35  A1IB6 25 
A1IB6 C36  C25 C 0 1 Y N N N N N 3.574  45.631 -7.737  6.732  0.820  -1.002 C36  A1IB6 26 
A1IB6 C37  C26 C 0 1 N N N N N N 4.319  44.606 -8.423  7.379  0.442  -2.222 C37  A1IB6 27 
A1IB6 C39  C27 C 0 1 Y N N N N N 3.461  46.905 -8.293  5.733  0.011  -0.457 C39  A1IB6 28 
A1IB6 C7   C28 C 0 1 Y N N N N N 9.492  51.679 -13.051 -4.773 -1.404 0.095  C7   A1IB6 29 
A1IB6 N1   N2  N 0 1 N N N N N N 11.583 51.359 -14.164 -7.130 -0.851 0.106  N1   A1IB6 30 
A1IB6 N13  N3  N 0 1 Y N N N N N 9.189  45.091 -16.264 -7.664 4.895  -0.373 N13  A1IB6 31 
A1IB6 N18  N4  N 0 1 Y N N N N N 7.540  52.003 -11.965 -2.566 -1.767 0.065  N18  A1IB6 32 
A1IB6 N26  N5  N 0 1 N N N N N N 3.851  50.342 -7.958  2.431  -0.232 0.678  N26  A1IB6 33 
A1IB6 N38  N6  N 0 1 N N N N N N 4.899  43.804 -8.997  7.893  0.142  -3.190 N38  A1IB6 34 
A1IB6 N5   N7  N 0 1 Y N N N N N 9.088  53.852 -12.004 -4.157 -3.668 0.275  N5   A1IB6 35 
A1IB6 O21  O1  O 0 1 N N N N N N 4.743  53.556 -12.438 -1.436 -4.205 -1.616 O21  A1IB6 36 
A1IB6 O23  O2  O 0 1 N N N N N N 4.026  53.847 -9.872  1.082  -4.346 -0.979 O23  A1IB6 37 
A1IB6 O34  O3  O 0 1 N N N N N N 3.060  44.061 -6.065  8.066  2.800  -0.868 O34  A1IB6 38 
A1IB6 O40  O4  O 0 1 N N N N N N 1.433  50.091 -7.673  4.151  -1.972 0.994  O40  A1IB6 39 
A1IB6 O41  O5  O 0 1 N N N N N N 2.528  49.311 -9.751  3.735  -0.265 2.772  O41  A1IB6 40 
A1IB6 O42  O6  O 0 1 N N N N N N 6.586  51.944 -9.864  -0.214 -1.526 0.440  O42  A1IB6 41 
A1IB6 S29  S1  S 0 1 N N N N N N 2.535  49.463 -8.330  3.858  -0.645 1.409  S29  A1IB6 42 
A1IB6 H4   H1  H 0 1 N N N N N N 10.654 55.150 -12.243 -5.700 -5.029 0.435  H4   A1IB6 43 
A1IB6 H12  H2  H 0 1 N N N N N N 7.857  46.338 -15.264 -7.754 2.829  -0.191 H12  A1IB6 44 
A1IB6 H14  H3  H 0 1 N N N N N N 10.725 44.034 -17.185 -7.418 6.948  -0.558 H14  A1IB6 45 
A1IB6 H15  H4  H 0 1 N N N N N N 12.499 45.593 -16.560 -4.962 6.822  -0.606 H15  A1IB6 46 
A1IB6 H16  H5  H 0 1 N N N N N N 11.925 47.607 -15.232 -3.851 4.608  -0.443 H16  A1IB6 47 
A1IB6 H17  H6  H 0 1 N N N N N N 6.737  50.003 -12.345 -1.938 0.307  -0.133 H17  A1IB6 48 
A1IB6 H20  H7  H 0 1 N N N N N N 4.948  51.484 -12.114 -1.179 -2.193 -2.085 H20  A1IB6 49 
A1IB6 H22  H8  H 0 1 N N N N N N 3.391  51.919 -10.387 1.129  -2.629 -2.148 H22  A1IB6 50 
A1IB6 H24  H9  H 0 1 N N N N N N 5.238  52.466 -8.378  1.487  -2.683 0.749  H24  A1IB6 51 
A1IB6 H25A H10 H 0 0 N N N N N N 4.706  49.863 -9.817  2.817  -1.417 -1.009 H25A A1IB6 52 
A1IB6 H25B H11 H 0 0 N N N N N N 5.864  49.992 -8.450  1.435  -0.307 -1.167 H25B A1IB6 53 
A1IB6 H31  H12 H 0 1 N N N N N N 1.621  48.381 -5.854  4.987  1.834  2.281  H31  A1IB6 54 
A1IB6 H19  H13 H 0 1 N N N N N N 6.743  53.671 -10.984 -1.290 -3.288 0.781  H19  A1IB6 55 
A1IB6 H27B H14 H 0 0 N N N N N N 3.609  49.941 -5.909  1.010  1.287  0.404  H27B A1IB6 56 
A1IB6 H27A H15 H 0 0 N N N N N N 5.219  50.583 -6.380  2.301  1.661  1.571  H27A A1IB6 57 
A1IB6 H28C H16 H 0 0 N N N N N N 3.928  52.231 -5.121  0.079  1.184  2.658  H28C A1IB6 58 
A1IB6 H28B H17 H 0 0 N N N N N N 4.219  52.776 -6.807  0.159  -0.468 2.000  H28B A1IB6 59 
A1IB6 H28A H18 H 0 0 N N N N N N 2.609  52.134 -6.336  1.372  0.079  3.182  H28A A1IB6 60 
A1IB6 H32  H19 H 0 1 N N N N N N 1.824  46.130 -4.874  6.742  3.274  1.339  H32  A1IB6 61 
A1IB6 H35A H20 H 0 0 N N N N N N 2.516  42.647 -4.641  9.173  4.534  -0.670 H35A A1IB6 62 
A1IB6 H35B H21 H 0 0 N N N N N N 2.734  44.321 -4.028  7.498  4.621  -0.075 H35B A1IB6 63 
A1IB6 H35C H22 H 0 0 N N N N N N 1.282  43.901 -4.999  8.727  3.730  0.854  H35C A1IB6 64 
A1IB6 H39  H23 H 0 1 N N N N N N 3.917  47.130 -9.246  5.446  -0.904 -0.955 H39  A1IB6 65 
A1IB6 H1B  H24 H 0 1 N N N N N N 12.424 51.862 -14.361 -8.057 -1.133 0.152  H1B  A1IB6 66 
A1IB6 H1A  H25 H 0 1 N N N N N N 11.800 50.543 -13.629 -6.913 0.091  0.019  H1A  A1IB6 67 
A1IB6 H21  H26 H 0 1 N N N N N N 3.849  53.452 -12.743 -1.147 -4.584 -2.457 H21  A1IB6 68 
A1IB6 H23  H27 H 0 1 N N N N N N 3.540  53.820 -9.056  0.836  -4.972 -1.673 H23  A1IB6 69 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1IB6 N1  C2   SING N N 1  
A1IB6 C2  N3   DOUB Y N 2  
A1IB6 N3  C4   SING Y N 3  
A1IB6 C4  N5   DOUB Y N 4  
A1IB6 N5  C6   SING Y N 5  
A1IB6 C6  C7   DOUB Y N 6  
A1IB6 C7  C8   SING Y N 7  
A1IB6 C8  C9   SING N N 8  
A1IB6 C9  C10  TRIP N N 9  
A1IB6 C10 C11  SING N N 10 
A1IB6 C11 C12  DOUB Y N 11 
A1IB6 C12 N13  SING Y N 12 
A1IB6 N13 C14  DOUB Y N 13 
A1IB6 C14 C15  SING Y N 14 
A1IB6 C15 C16  DOUB Y N 15 
A1IB6 C8  C17  DOUB Y N 16 
A1IB6 C17 N18  SING Y N 17 
A1IB6 N18 C19  SING N N 18 
A1IB6 C19 C20  SING N N 19 
A1IB6 C20 O21  SING N N 20 
A1IB6 C20 C22  SING N N 21 
A1IB6 C22 O23  SING N N 22 
A1IB6 C22 C24  SING N N 23 
A1IB6 C24 C25  SING N N 24 
A1IB6 C25 N26  SING N N 25 
A1IB6 N26 C27  SING N N 26 
A1IB6 C27 C28  SING N N 27 
A1IB6 N26 S29  SING N N 28 
A1IB6 S29 C30  SING N N 29 
A1IB6 C30 C31  DOUB Y N 30 
A1IB6 C31 C32  SING Y N 31 
A1IB6 C32 C33  DOUB Y N 32 
A1IB6 C33 O34  SING N N 33 
A1IB6 O34 C35  SING N N 34 
A1IB6 C33 C36  SING Y N 35 
A1IB6 C36 C37  SING N N 36 
A1IB6 C37 N38  TRIP N N 37 
A1IB6 C36 C39  DOUB Y N 38 
A1IB6 S29 O40  DOUB N N 39 
A1IB6 S29 O41  DOUB N N 40 
A1IB6 C24 O42  SING N N 41 
A1IB6 C7  C2   SING Y N 42 
A1IB6 N18 C6   SING Y N 43 
A1IB6 C16 C11  SING Y N 44 
A1IB6 O42 C19  SING N N 45 
A1IB6 C39 C30  SING Y N 46 
A1IB6 C4  H4   SING N N 47 
A1IB6 C12 H12  SING N N 48 
A1IB6 C14 H14  SING N N 49 
A1IB6 C15 H15  SING N N 50 
A1IB6 C16 H16  SING N N 51 
A1IB6 C17 H17  SING N N 52 
A1IB6 C20 H20  SING N N 53 
A1IB6 C22 H22  SING N N 54 
A1IB6 C24 H24  SING N N 55 
A1IB6 C25 H25A SING N N 56 
A1IB6 C25 H25B SING N N 57 
A1IB6 C31 H31  SING N N 58 
A1IB6 C19 H19  SING N N 59 
A1IB6 C27 H27B SING N N 60 
A1IB6 C27 H27A SING N N 61 
A1IB6 C28 H28C SING N N 62 
A1IB6 C28 H28B SING N N 63 
A1IB6 C28 H28A SING N N 64 
A1IB6 C32 H32  SING N N 65 
A1IB6 C35 H35A SING N N 66 
A1IB6 C35 H35B SING N N 67 
A1IB6 C35 H35C SING N N 68 
A1IB6 C39 H39  SING N N 69 
A1IB6 N1  H1B  SING N N 70 
A1IB6 N1  H1A  SING N N 71 
A1IB6 O21 H21  SING N N 72 
A1IB6 O23 H23  SING N N 73 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1IB6 InChI            InChI                1.06  "InChI=1S/C28H27N7O6S/c1-3-34(42(38,39)20-8-9-21(40-2)19(11-20)12-29)15-22-24(36)25(37)28(41-22)35-14-18(7-6-17-5-4-10-31-13-17)23-26(30)32-16-33-27(23)35/h4-5,8-11,13-14,16,22,24-25,28,36-37H,3,15H2,1-2H3,(H2,30,32,33)" 
A1IB6 InChIKey         InChI                1.06  CNRYAFNRBRLDCL-UHFFFAOYSA-N                                                                                                                                                                                                  
A1IB6 SMILES_CANONICAL CACTVS               3.385 "CCN(C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cc(C#Cc3cccnc3)c4c(N)ncnc24)[S](=O)(=O)c5ccc(OC)c(c5)C#N"                                                                                                                              
A1IB6 SMILES           CACTVS               3.385 "CCN(C[CH]1O[CH]([CH](O)[CH]1O)n2cc(C#Cc3cccnc3)c4c(N)ncnc24)[S](=O)(=O)c5ccc(OC)c(c5)C#N"                                                                                                                                   
A1IB6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN(C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cc(c3c2ncnc3N)C#Cc4cccnc4)O)O)S(=O)(=O)c5ccc(c(c5)C#N)OC"                                                                                                                               
A1IB6 SMILES           "OpenEye OEToolkits" 2.0.7 "CCN(CC1C(C(C(O1)n2cc(c3c2ncnc3N)C#Cc4cccnc4)O)O)S(=O)(=O)c5ccc(c(c5)C#N)OC"                                                                                                                                                 
# 
_pdbx_chem_comp_identifier.comp_id           A1IB6 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-pyridin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-3-cyano-~{N}-ethyl-4-methoxy-benzenesulfonamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1IB6 "Create component" 2024-05-20 PDBE 
A1IB6 "Initial release"  2024-08-28 RCSB 
# 
