data_A1AM6
# 
_chem_comp.id                                    A1AM6 
_chem_comp.name                                  "2-[4-(propan-2-yl)piperazin-1-yl]pyrimidine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H18 N4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-04-15 
_chem_comp.pdbx_modified_date                    2024-04-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        206.287 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AM6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7H3Q 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AM6 N1  N1  N 0 1 N N N N N N 8.746  21.407 28.297 -0.468 -0.007 0.394  N1  A1AM6 1  
A1AM6 N3  N2  N 0 1 Y N N N N N 8.558  19.341 29.328 -2.501 1.144  0.468  N3  A1AM6 2  
A1AM6 C4  C1  C 0 1 N N N N N N 8.429  22.307 27.183 0.204  1.065  -0.354 C4  A1AM6 3  
A1AM6 C5  C2  C 0 1 N N N N N N 10.139 21.565 28.730 0.081  -1.322 0.033  C5  A1AM6 4  
A1AM6 C6  C3  C 0 1 N N N N N N 11.099 21.293 27.580 1.580  -1.348 0.344  C6  A1AM6 5  
A1AM6 C7  C4  C 0 1 Y N N N N N 7.997  20.287 28.551 -1.837 0.030  0.193  C7  A1AM6 6  
A1AM6 C8  C5  C 0 1 Y N N N N N 6.114  19.074 28.156 -3.760 -1.045 -0.473 C8  A1AM6 7  
A1AM6 C10 C6  C 0 1 Y N N N N N 7.829  18.225 29.490 -3.809 1.213  0.287  C10 A1AM6 8  
A1AM6 N   N3  N 0 1 N N N N N N 10.737 22.033 26.360 2.251  -0.276 -0.404 N   A1AM6 9  
A1AM6 C   C7  C 0 1 N N N N N N 12.993 21.573 25.366 4.379  0.731  -1.080 C   A1AM6 10 
A1AM6 C1  C8  C 0 1 N N N N N N 11.878 22.582 25.594 3.704  -0.316 -0.191 C1  A1AM6 11 
A1AM6 C2  C9  C 0 1 N N N N N N 11.442 23.201 24.279 4.013  -0.014 1.277  C2  A1AM6 12 
A1AM6 C3  C10 C 0 1 N N N N N N 9.674  23.005 26.660 1.702  1.038  -0.044 C3  A1AM6 13 
A1AM6 C9  C11 C 0 1 Y N N N N N 6.594  18.030 28.913 -4.485 0.103  -0.196 C9  A1AM6 14 
A1AM6 N2  N4  N 0 1 Y N N N N N 6.787  20.218 27.960 -2.453 -1.048 -0.270 N2  A1AM6 15 
A1AM6 H9  H1  H 0 1 N N N N N N 7.712  23.066 27.529 0.051  0.913  -1.423 H9  A1AM6 16 
A1AM6 H10 H2  H 0 1 N N N N N N 7.978  21.722 26.368 -0.212 2.029  -0.061 H10 A1AM6 17 
A1AM6 H11 H3  H 0 1 N N N N N N 10.290 22.593 29.090 -0.423 -2.097 0.609  H11 A1AM6 18 
A1AM6 H12 H4  H 0 1 N N N N N N 10.345 20.857 29.546 -0.073 -1.500 -1.031 H12 A1AM6 19 
A1AM6 H13 H5  H 0 1 N N N N N N 12.112 21.592 27.887 1.732  -1.196 1.412  H13 A1AM6 20 
A1AM6 H14 H6  H 0 1 N N N N N N 11.087 20.216 27.357 1.995  -2.312 0.050  H14 A1AM6 21 
A1AM6 H15 H7  H 0 1 N N N N N N 5.143  18.967 27.695 -4.256 -1.927 -0.850 H15 A1AM6 22 
A1AM6 H17 H8  H 0 1 N N N N N N 8.234  17.437 30.107 -4.345 2.123  0.513  H17 A1AM6 23 
A1AM6 H1  H10 H 0 1 N N N N N N 13.295 21.136 26.329 4.159  0.516  -2.125 H1  A1AM6 24 
A1AM6 H   H11 H 0 1 N N N N N N 12.635 20.776 24.698 4.002  1.721  -0.825 H   A1AM6 25 
A1AM6 H2  H12 H 0 1 N N N N N N 13.855 22.077 24.906 5.457  0.701  -0.921 H2  A1AM6 26 
A1AM6 H3  H13 H 0 1 N N N N N N 12.309 23.395 26.196 4.082  -1.306 -0.445 H3  A1AM6 27 
A1AM6 H4  H14 H 0 1 N N N N N N 10.636 23.927 24.464 3.532  -0.760 1.910  H4  A1AM6 28 
A1AM6 H5  H15 H 0 1 N N N N N N 12.297 23.713 23.814 5.091  -0.044 1.435  H5  A1AM6 29 
A1AM6 H6  H16 H 0 1 N N N N N N 11.077 22.412 23.606 3.635  0.976  1.531  H6  A1AM6 30 
A1AM6 H7  H17 H 0 1 N N N N N N 10.037 23.711 27.421 2.207  1.814  -0.620 H7  A1AM6 31 
A1AM6 H8  H18 H 0 1 N N N N N N 9.419  23.554 25.742 1.856  1.217  1.020  H8  A1AM6 32 
A1AM6 H16 H19 H 0 1 N N N N N N 6.037  17.115 29.046 -5.553 0.132  -0.352 H16 A1AM6 33 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AM6 C   C1  SING N N 1  
A1AM6 C1  C2  SING N N 2  
A1AM6 N   C1  SING N N 3  
A1AM6 N   C3  SING N N 4  
A1AM6 C3  C4  SING N N 5  
A1AM6 C4  N1  SING N N 6  
A1AM6 N1  C5  SING N N 7  
A1AM6 C5  C6  SING N N 8  
A1AM6 C6  N   SING N N 9  
A1AM6 C7  N1  SING N N 10 
A1AM6 C7  N2  DOUB Y N 11 
A1AM6 N2  C8  SING Y N 12 
A1AM6 C8  C9  DOUB Y N 13 
A1AM6 C9  C10 SING Y N 14 
A1AM6 C10 N3  DOUB Y N 15 
A1AM6 N3  C7  SING Y N 16 
A1AM6 C4  H9  SING N N 17 
A1AM6 C4  H10 SING N N 18 
A1AM6 C5  H11 SING N N 19 
A1AM6 C5  H12 SING N N 20 
A1AM6 C6  H13 SING N N 21 
A1AM6 C6  H14 SING N N 22 
A1AM6 C8  H15 SING N N 23 
A1AM6 C10 H17 SING N N 24 
A1AM6 C   H1  SING N N 25 
A1AM6 C   H   SING N N 26 
A1AM6 C   H2  SING N N 27 
A1AM6 C1  H3  SING N N 28 
A1AM6 C2  H4  SING N N 29 
A1AM6 C2  H5  SING N N 30 
A1AM6 C2  H6  SING N N 31 
A1AM6 C3  H7  SING N N 32 
A1AM6 C3  H8  SING N N 33 
A1AM6 C9  H16 SING N N 34 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AM6 SMILES           ACDLabs              12.01 "CC(C)N1CCN(CC1)c1ncccn1"                                                           
A1AM6 InChI            InChI                1.06  "InChI=1S/C11H18N4/c1-10(2)14-6-8-15(9-7-14)11-12-4-3-5-13-11/h3-5,10H,6-9H2,1-2H3" 
A1AM6 InChIKey         InChI                1.06  JMSBGUKOMZSBMF-UHFFFAOYSA-N                                                         
A1AM6 SMILES_CANONICAL CACTVS               3.385 "CC(C)N1CCN(CC1)c2ncccn2"                                                           
A1AM6 SMILES           CACTVS               3.385 "CC(C)N1CCN(CC1)c2ncccn2"                                                           
A1AM6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)N1CCN(CC1)c2ncccn2"                                                           
A1AM6 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)N1CCN(CC1)c2ncccn2"                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AM6 "SYSTEMATIC NAME" ACDLabs              12.01 "2-[4-(propan-2-yl)piperazin-1-yl]pyrimidine" 
A1AM6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-(4-propan-2-ylpiperazin-1-yl)pyrimidine"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AM6 "Create component" 2024-04-15 RCSB 
A1AM6 "Initial release"  2024-04-24 RCSB 
# 
