data_9D6
#

_chem_comp.id                                   9D6
_chem_comp.name                                 "N-[(4-{[cyclohexyl(ethyl)amino]methyl}phenyl)methyl]-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H28 N4 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-03-16
_chem_comp.pdbx_modified_date                   2019-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       424.559
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    9D6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5ZHK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9D6  CAN  C1   C  0  1  N  N  N   0.832  -20.919  -16.198  -6.711   1.213   0.673  CAN  9D6   1  
9D6  CAK  C2   C  0  1  N  N  N  -0.572  -21.551  -16.003  -7.052   2.491  -0.096  CAK  9D6   2  
9D6  CAJ  C3   C  0  1  N  N  N  -0.878  -22.661  -17.039  -7.747   2.125  -1.409  CAJ  9D6   3  
9D6  CAL  C4   C  0  1  N  N  N   0.134  -23.830  -16.929  -6.814   1.256  -2.254  CAL  9D6   4  
9D6  CAO  C5   C  0  1  N  N  N   1.420  -23.422  -16.155  -6.472  -0.022  -1.486  CAO  9D6   5  
9D6  CBC  C6   C  0  1  N  N  N   1.912  -21.988  -16.538  -5.778   0.343  -0.172  CBC  9D6   6  
9D6  NBD  N1   N  0  1  N  N  N   3.348  -21.707  -16.179  -5.450  -0.884   0.566  NBD  9D6   7  
9D6  CAM  C7   C  0  1  N  N  N   4.290  -22.323  -17.169  -6.641  -1.724   0.748  CAM  9D6   8  
9D6  CAA  C8   C  0  1  N  N  N   3.916  -22.315  -18.675  -6.367  -2.771   1.828  CAA  9D6   9  
9D6  CAQ  C9   C  0  1  N  N  N   3.801  -20.294  -16.077  -4.377  -1.630  -0.104  CAQ  9D6  10  
9D6  CAX  C10  C  0  1  Y  N  N   3.918  -19.637  -14.842  -3.056  -0.951   0.151  CAX  9D6  11  
9D6  CAG  C11  C  0  1  Y  N  N   2.827  -18.904  -14.355  -2.349  -1.227   1.306  CAG  9D6  12  
9D6  CAE  C12  C  0  1  Y  N  N   2.933  -18.117  -13.202  -1.138  -0.603   1.541  CAE  9D6  13  
9D6  CAF  C13  C  0  1  Y  N  N   5.170  -19.451  -14.239  -2.550  -0.055  -0.772  CAF  9D6  14  
9D6  CAD  C14  C  0  1  Y  N  N   5.288  -18.654  -13.084  -1.339   0.568  -0.538  CAD  9D6  15  
9D6  CAW  C15  C  0  1  Y  N  N   4.163  -17.997  -12.552  -0.634   0.296   0.620  CAW  9D6  16  
9D6  CAP  C16  C  0  1  N  N  N   4.258  -17.157  -11.435   0.687   0.976   0.876  CAP  9D6  17  
9D6  NAS  N2   N  0  1  N  N  N   4.102  -17.863  -10.142   1.770   0.167   0.312  NAS  9D6  18  
9D6  CAV  C17  C  0  1  N  N  N   4.940  -17.642   -9.114   3.048   0.582   0.422  CAV  9D6  19  
9D6  OAB  O1   O  0  1  N  N  N   5.905  -16.883   -9.257   3.301   1.628   0.989  OAB  9D6  20  
9D6  CAY  C18  C  0  1  Y  N  N   4.819  -18.336   -7.945   4.135  -0.230  -0.144  CAY  9D6  21  
9D6  CBB  C19  C  0  1  Y  N  N   3.934  -19.305   -7.518   5.541   0.155  -0.064  CBB  9D6  22  
9D6  CAZ  C20  C  0  1  N  N  N   2.812  -19.861   -8.058   6.156   1.299   0.523  CAZ  9D6  23  
9D6  OAC  O2   O  0  1  N  N  N   2.370  -19.584   -9.174   5.484   2.155   1.072  OAC  9D6  24  
9D6  NAT  N3   N  0  1  N  N  N   2.094  -20.838   -7.372   7.498   1.416   0.458  NAT  9D6  25  
9D6  CAH  C21  C  0  1  N  N  N   2.405  -21.222   -6.154   8.239   0.459  -0.155  CAH  9D6  26  
9D6  NAR  N4   N  0  1  N  N  N   3.541  -20.668   -5.589   7.694  -0.591  -0.696  NAR  9D6  27  
9D6  CBA  C22  C  0  1  Y  N  N   4.257  -19.757   -6.262   6.358  -0.786  -0.675  CBA  9D6  28  
9D6  SAU  S1   S  0  1  Y  N  N   5.564  -19.048   -5.734   5.377  -2.095  -1.319  SAU  9D6  29  
9D6  CAI  C23  C  0  1  Y  N  N   5.769  -18.074   -7.040   3.926  -1.393  -0.775  CAI  9D6  30  
9D6  H1   H1   H  0  1  N  N  N   1.122  -20.405  -15.270  -6.216   1.473   1.609  H1   9D6  31  
9D6  H2   H2   H  0  1  N  N  N   0.782  -20.191  -17.021  -7.626   0.662   0.887  H2   9D6  32  
9D6  H3   H3   H  0  1  N  N  N  -1.330  -20.760  -16.100  -7.717   3.110   0.507  H3   9D6  33  
9D6  H4   H4   H  0  1  N  N  N  -0.624  -21.987  -14.994  -6.137   3.042  -0.310  H4   9D6  34  
9D6  H5   H5   H  0  1  N  N  N  -0.821  -22.232  -18.050  -8.663   1.574  -1.195  H5   9D6  35  
9D6  H6   H6   H  0  1  N  N  N  -1.892  -23.047  -16.861  -7.990   3.036  -1.957  H6   9D6  36  
9D6  H7   H7   H  0  1  N  N  N  -0.347  -24.667  -16.401  -7.309   0.995  -3.190  H7   9D6  37  
9D6  H8   H8   H  0  1  N  N  N   0.417  -24.150  -17.943  -5.898   1.807  -2.469  H8   9D6  38  
9D6  H9   H9   H  0  1  N  N  N   1.207  -23.447  -15.076  -7.388  -0.573  -1.271  H9   9D6  39  
9D6  H10  H10  H  0  1  N  N  N   2.217  -24.144  -16.388  -5.808  -0.642  -2.088  H10  9D6  40  
9D6  H11  H11  H  0  1  N  N  N   1.915  -22.006  -17.638  -4.862   0.894  -0.386  H11  9D6  41  
9D6  H13  H13  H  0  1  N  N  N   4.422  -23.375  -16.876  -7.482  -1.100   1.051  H13  9D6  42  
9D6  H14  H14  H  0  1  N  N  N   5.249  -21.793  -17.073  -6.880  -2.224  -0.191  H14  9D6  43  
9D6  H15  H15  H  0  1  N  N  N   4.713  -22.804  -19.254  -7.236  -3.422   1.933  H15  9D6  44  
9D6  H16  H16  H  0  1  N  N  N   2.971  -22.859  -18.821  -5.499  -3.367   1.545  H16  9D6  45  
9D6  H17  H17  H  0  1  N  N  N   3.798  -21.276  -19.018  -6.171  -2.272   2.777  H17  9D6  46  
9D6  H18  H18  H  0  1  N  N  N   4.797  -20.256  -16.541  -4.343  -2.648   0.286  H18  9D6  47  
9D6  H19  H19  H  0  1  N  N  N   3.095  -19.700  -16.676  -4.569  -1.659  -1.177  H19  9D6  48  
9D6  H20  H20  H  0  1  N  N  N   1.884  -18.947  -14.880  -2.743  -1.929   2.026  H20  9D6  49  
9D6  H21  H21  H  0  1  N  N  N   2.065  -17.604  -12.816  -0.585  -0.818   2.444  H21  9D6  50  
9D6  H22  H22  H  0  1  N  N  N   6.046  -19.920  -14.661  -3.100   0.157  -1.677  H22  9D6  51  
9D6  H23  H23  H  0  1  N  N  N   6.249  -18.546  -12.603  -0.943   1.268  -1.259  H23  9D6  52  
9D6  H24  H24  H  0  1  N  N  N   5.245  -16.672  -11.449   0.685   1.960   0.406  H24  9D6  53  
9D6  H25  H25  H  0  1  N  N  N   3.472  -16.391  -11.509   0.836   1.087   1.950  H25  9D6  54  
9D6  H26  H26  H  0  1  N  N  N   3.356  -18.519  -10.031   1.568  -0.667  -0.140  H26  9D6  55  
9D6  H27  H27  H  0  1  N  N  N   1.801  -21.938   -5.617   9.312   0.572  -0.196  H27  9D6  56  
9D6  H29  H29  H  0  1  N  N  N   6.550  -17.336   -7.151   2.951  -1.832  -0.923  H29  9D6  57  
9D6  H30  H30  H  0  1  N  N  N   1.311  -21.264   -7.824   7.935   2.188   0.851  H30  9D6  58  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9D6  CAA  CAM  SING  N  N   1  
9D6  CAM  NBD  SING  N  N   2  
9D6  CAJ  CAL  SING  N  N   3  
9D6  CAJ  CAK  SING  N  N   4  
9D6  CAL  CAO  SING  N  N   5  
9D6  CBC  CAN  SING  N  N   6  
9D6  CBC  NBD  SING  N  N   7  
9D6  CBC  CAO  SING  N  N   8  
9D6  CAN  CAK  SING  N  N   9  
9D6  NBD  CAQ  SING  N  N  10  
9D6  CAQ  CAX  SING  N  N  11  
9D6  CAX  CAG  DOUB  Y  N  12  
9D6  CAX  CAF  SING  Y  N  13  
9D6  CAG  CAE  SING  Y  N  14  
9D6  CAF  CAD  DOUB  Y  N  15  
9D6  CAE  CAW  DOUB  Y  N  16  
9D6  CAD  CAW  SING  Y  N  17  
9D6  CAW  CAP  SING  N  N  18  
9D6  CAP  NAS  SING  N  N  19  
9D6  NAS  CAV  SING  N  N  20  
9D6  OAB  CAV  DOUB  N  N  21  
9D6  OAC  CAZ  DOUB  N  N  22  
9D6  CAV  CAY  SING  N  N  23  
9D6  CAZ  CBB  SING  N  N  24  
9D6  CAZ  NAT  SING  N  N  25  
9D6  CAY  CBB  SING  Y  N  26  
9D6  CAY  CAI  DOUB  Y  N  27  
9D6  CBB  CBA  DOUB  Y  N  28  
9D6  NAT  CAH  SING  N  N  29  
9D6  CAI  SAU  SING  Y  N  30  
9D6  CBA  SAU  SING  Y  N  31  
9D6  CBA  NAR  SING  N  N  32  
9D6  CAH  NAR  DOUB  N  N  33  
9D6  CAN  H1   SING  N  N  34  
9D6  CAN  H2   SING  N  N  35  
9D6  CAK  H3   SING  N  N  36  
9D6  CAK  H4   SING  N  N  37  
9D6  CAJ  H5   SING  N  N  38  
9D6  CAJ  H6   SING  N  N  39  
9D6  CAL  H7   SING  N  N  40  
9D6  CAL  H8   SING  N  N  41  
9D6  CAO  H9   SING  N  N  42  
9D6  CAO  H10  SING  N  N  43  
9D6  CBC  H11  SING  N  N  44  
9D6  CAM  H13  SING  N  N  45  
9D6  CAM  H14  SING  N  N  46  
9D6  CAA  H15  SING  N  N  47  
9D6  CAA  H16  SING  N  N  48  
9D6  CAA  H17  SING  N  N  49  
9D6  CAQ  H18  SING  N  N  50  
9D6  CAQ  H19  SING  N  N  51  
9D6  CAG  H20  SING  N  N  52  
9D6  CAE  H21  SING  N  N  53  
9D6  CAF  H22  SING  N  N  54  
9D6  CAD  H23  SING  N  N  55  
9D6  CAP  H24  SING  N  N  56  
9D6  CAP  H25  SING  N  N  57  
9D6  NAS  H26  SING  N  N  58  
9D6  CAH  H27  SING  N  N  59  
9D6  CAI  H29  SING  N  N  60  
9D6  NAT  H30  SING  N  N  61  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9D6  SMILES            ACDLabs               12.01  "C1CCCCC1N(Cc2ccc(cc2)CNC(c4c3c(N=CNC3=O)sc4)=O)CC"  
9D6  InChI             InChI                 1.03   "InChI=1S/C23H28N4O2S/c1-2-27(18-6-4-3-5-7-18)13-17-10-8-16(9-11-17)12-24-21(28)19-14-30-23-20(19)22(29)25-15-26-23/h8-11,14-15,18H,2-7,12-13H2,1H3,(H,24,28)(H,25,26,29)"  
9D6  InChIKey          InChI                 1.03   VDWQEXVBMIBDPI-UHFFFAOYSA-N  
9D6  SMILES_CANONICAL  CACTVS                3.385  "CCN(Cc1ccc(CNC(=O)c2csc3N=CNC(=O)c23)cc1)C4CCCCC4"  
9D6  SMILES            CACTVS                3.385  "CCN(Cc1ccc(CNC(=O)c2csc3N=CNC(=O)c23)cc1)C4CCCCC4"  
9D6  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCN(Cc1ccc(cc1)CNC(=O)c2csc3c2C(=O)NC=N3)C4CCCCC4"  
9D6  SMILES            "OpenEye OEToolkits"  2.0.6  "CCN(Cc1ccc(cc1)CNC(=O)c2csc3c2C(=O)NC=N3)C4CCCCC4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9D6  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(4-{[cyclohexyl(ethyl)amino]methyl}phenyl)methyl]-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide"  
9D6  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "~{N}-[[4-[[cyclohexyl(ethyl)amino]methyl]phenyl]methyl]-4-oxidanylidene-3~{H}-thieno[2,3-d]pyrimidine-5-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9D6  "Create component"  2018-03-16  RCSB  
9D6  "Initial release"   2019-03-06  RCSB  
##
