data_8R6
# 
_chem_comp.id                                    8R6 
_chem_comp.name                                  "(2S)-6-[2-(7-azido-4-methyl-2-oxidanylidene-chromen-3-yl)ethanoylamino]-2-[bis(2-hydroxy-2-oxoethyl)amino]hexanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H25 N5 O9" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-08-30 
_chem_comp.pdbx_modified_date                    2018-01-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        503.462 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8R6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5Y6K 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8R6 O29 O1  O 0  1 N N N 10.906 14.314 2.227 3.866  -3.083 -1.015 O29 8R6 1  
8R6 C27 C1  C 0  1 N N N 10.425 13.147 2.376 4.452  -2.131 -0.531 C27 8R6 2  
8R6 O26 O2  O 0  1 N N N 11.251 12.128 2.827 5.600  -1.708 -1.086 O26 8R6 3  
8R6 C25 C2  C 0  1 Y N N 10.793 10.839 3.016 6.275  -0.653 -0.572 C25 8R6 4  
8R6 C33 C3  C 0  1 Y N N 11.643 9.847  3.487 7.449  -0.241 -1.161 C33 8R6 5  
8R6 C32 C4  C 0  1 Y N N 11.154 8.594  3.672 8.155  0.865  -0.622 C32 8R6 6  
8R6 N34 N1  N 0  1 N N N 11.987 7.661  4.075 9.284  1.272  -1.176 N34 8R6 7  
8R6 C31 C5  C 0  1 Y N N 9.843  8.262  3.405 7.619  1.552  0.558  C31 8R6 8  
8R6 C30 C6  C 0  1 Y N N 8.940  9.178  2.934 6.460  1.121  1.112  C30 8R6 9  
8R6 C24 C7  C 0  1 Y N N 9.379  10.462 2.726 5.772  0.021  0.563  C24 8R6 10 
8R6 C23 C8  C 0  1 N N N 8.470  11.479 2.246 4.560  -0.422 1.152  C23 8R6 11 
8R6 C28 C9  C 0  1 N N N 7.057  11.109 1.971 3.999  0.276  2.364  C28 8R6 12 
8R6 C22 C10 C 0  1 N N N 8.984  12.817 2.063 3.910  -1.482 0.604  C22 8R6 13 
8R6 C21 C11 C 0  1 N N N 8.067  13.891 1.590 2.620  -1.972 1.209  C21 8R6 14 
8R6 C19 C12 C 0  1 N N N 7.997  14.878 2.730 1.455  -1.344 0.488  C19 8R6 15 
8R6 O20 O3  O 0  1 N N N 8.845  15.799 2.824 1.653  -0.575 -0.428 O20 8R6 16 
8R6 N18 N2  N 0  1 N N N 7.055  14.693 3.594 0.194  -1.638 0.861  N18 8R6 17 
8R6 C17 C13 C 0  1 N N N 6.221  13.515 3.596 -0.938 -1.028 0.160  C17 8R6 18 
8R6 C16 C14 C 0  1 N N N 6.470  12.633 4.792 -2.248 -1.525 0.775  C16 8R6 19 
8R6 C15 C15 C 0  1 N N N 6.929  13.414 5.988 -3.430 -0.888 0.042  C15 8R6 20 
8R6 C14 C16 C 0  1 N N N 7.238  12.614 7.233 -4.739 -1.386 0.658  C14 8R6 21 
8R6 C6  C17 C 0  1 N N S 8.417  11.663 7.311 -5.920 -0.847 -0.152 C6  8R6 22 
8R6 C7  C18 C 0  1 N N N 8.241  10.370 6.503 -7.210 -1.353 0.442  C7  8R6 23 
8R6 O8  O4  O 0  1 N N N 7.276  10.236 5.713 -7.902 -0.615 1.101  O8  8R6 24 
8R6 O9  O5  O 0  1 N N N 9.061  9.408  6.669 -7.588 -2.625 0.239  O9  8R6 25 
8R6 N1  N3  N 0  1 N N N 9.680  12.326 7.035 -5.909 0.621  -0.118 N1  8R6 26 
8R6 C2  C19 C 0  1 N N N 9.814  12.807 5.665 -6.989 1.176  -0.945 C2  8R6 27 
8R6 C3  C20 C 0  1 N N N 9.992  14.296 5.644 -6.621 1.050  -2.401 C3  8R6 28 
8R6 O4  O6  O 0  1 N N N 9.094  15.025 5.197 -5.535 0.624  -2.715 O4  8R6 29 
8R6 O5  O7  O 0  1 N N N 11.044 14.782 6.060 -7.500 1.412  -3.349 O5  8R6 30 
8R6 C10 C21 C 0  1 N N N 10.753 11.348 7.346 -5.996 1.116  1.263  C10 8R6 31 
8R6 C11 C22 C 0  1 N N N 12.095 11.598 6.752 -5.578 2.563  1.305  C11 8R6 32 
8R6 O12 O8  O 0  1 N N N 12.856 10.678 6.697 -5.670 3.255  2.451  O12 8R6 33 
8R6 O13 O9  O 0  1 N N N 12.438 12.693 6.320 -5.159 3.101  0.307  O13 8R6 34 
8R6 H1  H1  H 0  1 N N N 12.678 10.069 3.703 7.832  -0.757 -2.029 H1  8R6 35 
8R6 H4  H4  H 0  1 N N N 9.517  7.246  3.573 8.144  2.396  0.981  H4  8R6 36 
8R6 H5  H5  H 0  1 N N N 7.916  8.899  2.733 6.062  1.624  1.981  H5  8R6 37 
8R6 H6  H6  H 0  1 N N N 6.909  10.040 2.185 4.296  1.324  2.349  H6  8R6 38 
8R6 H7  H7  H 0  1 N N N 6.391  11.706 2.611 2.911  0.207  2.351  H7  8R6 39 
8R6 H8  H8  H 0  1 N N N 6.825  11.307 0.914 4.383  -0.198 3.267  H8  8R6 40 
8R6 H9  H9  H 0  1 N N N 8.469  14.372 0.687 2.563  -3.057 1.116  H9  8R6 41 
8R6 H10 H10 H 0  1 N N N 7.070  13.480 1.373 2.586  -1.696 2.263  H10 8R6 42 
8R6 H11 H11 H 0  1 N N N 6.897  15.394 4.289 0.036  -2.254 1.594  H11 8R6 43 
8R6 H12 H12 H 0  1 N N N 5.167  13.829 3.603 -0.882 0.057  0.253  H12 8R6 44 
8R6 H13 H13 H 0  1 N N N 6.425  12.937 2.683 -0.904 -1.304 -0.895 H13 8R6 45 
8R6 H14 H14 H 0  1 N N N 5.536  12.111 5.047 -2.304 -2.610 0.681  H14 8R6 46 
8R6 H15 H15 H 0  1 N N N 7.244  11.895 4.533 -2.282 -1.250 1.829  H15 8R6 47 
8R6 H16 H16 H 0  1 N N N 7.842  13.957 5.703 -3.374 0.197  0.136  H16 8R6 48 
8R6 H17 H17 H 0  1 N N N 6.138  14.135 6.241 -3.396 -1.164 -1.012 H17 8R6 49 
8R6 H18 H18 H 0  1 N N N 7.381  13.347 8.041 -4.756 -2.475 0.644  H18 8R6 50 
8R6 H19 H19 H 0  1 N N N 6.342  12.010 7.440 -4.814 -1.034 1.687  H19 8R6 51 
8R6 H20 H20 H 0  1 N N N 8.464  11.342 8.362 -5.838 -1.187 -1.185 H20 8R6 52 
8R6 H21 H21 H 0  1 N N N 8.801  8.672  6.127 -8.423 -2.904 0.640  H21 8R6 53 
8R6 H23 H23 H 0  1 N N N 8.909  12.543 5.099 -7.911 0.627  -0.754 H23 8R6 54 
8R6 H24 H24 H 0  1 N N N 10.690 12.332 5.199 -7.134 2.227  -0.696 H24 8R6 55 
8R6 H25 H25 H 0  1 N N N 11.014 15.727 5.971 -7.219 1.313  -4.269 H25 8R6 56 
8R6 H26 H26 H 0  1 N N N 10.414 10.362 6.995 -7.023 1.024  1.617  H26 8R6 57 
8R6 H27 H27 H 0  1 N N N 10.874 11.326 8.439 -5.337 0.529  1.902  H27 8R6 58 
8R6 H28 H28 H 0  1 N N N 13.669 10.963 6.296 -5.390 4.181  2.430  H28 8R6 59 
8R6 N2  N4  N 1  1 N N N ?      ?      ?     9.838  2.149  -0.744 N2  8R6 60 
8R6 N3  N5  N -1 1 N N N ?      ?      ?     10.392 3.026  -0.312 N3  8R6 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8R6 C21 C22 SING N N 1  
8R6 C21 C19 SING N N 2  
8R6 C28 C23 SING N N 3  
8R6 C22 C23 DOUB N N 4  
8R6 C22 C27 SING N N 5  
8R6 O29 C27 DOUB N N 6  
8R6 C23 C24 SING N N 7  
8R6 C27 O26 SING N N 8  
8R6 C24 C30 DOUB Y N 9  
8R6 C24 C25 SING Y N 10 
8R6 C19 O20 DOUB N N 11 
8R6 C19 N18 SING N N 12 
8R6 O26 C25 SING N N 13 
8R6 C30 C31 SING Y N 14 
8R6 C25 C33 DOUB Y N 15 
8R6 C31 C32 DOUB Y N 16 
8R6 C33 C32 SING Y N 17 
8R6 N18 C17 SING N N 18 
8R6 C17 C16 SING N N 19 
8R6 C32 N34 SING N N 20 
8R6 C16 C15 SING N N 21 
8R6 O4  C3  DOUB N N 22 
8R6 C3  C2  SING N N 23 
8R6 C3  O5  SING N N 24 
8R6 C2  N1  SING N N 25 
8R6 O8  C7  DOUB N N 26 
8R6 C15 C14 SING N N 27 
8R6 O13 C11 DOUB N N 28 
8R6 C7  O9  SING N N 29 
8R6 C7  C6  SING N N 30 
8R6 O12 C11 SING N N 31 
8R6 C11 C10 SING N N 32 
8R6 N1  C6  SING N N 33 
8R6 N1  C10 SING N N 34 
8R6 C14 C6  SING N N 35 
8R6 C33 H1  SING N N 36 
8R6 C31 H4  SING N N 37 
8R6 C30 H5  SING N N 38 
8R6 C28 H6  SING N N 39 
8R6 C28 H7  SING N N 40 
8R6 C28 H8  SING N N 41 
8R6 C21 H9  SING N N 42 
8R6 C21 H10 SING N N 43 
8R6 N18 H11 SING N N 44 
8R6 C17 H12 SING N N 45 
8R6 C17 H13 SING N N 46 
8R6 C16 H14 SING N N 47 
8R6 C16 H15 SING N N 48 
8R6 C15 H16 SING N N 49 
8R6 C15 H17 SING N N 50 
8R6 C14 H18 SING N N 51 
8R6 C14 H19 SING N N 52 
8R6 C6  H20 SING N N 53 
8R6 O9  H21 SING N N 54 
8R6 C2  H23 SING N N 55 
8R6 C2  H24 SING N N 56 
8R6 O5  H25 SING N N 57 
8R6 C10 H26 SING N N 58 
8R6 C10 H27 SING N N 59 
8R6 O12 H28 SING N N 60 
8R6 N34 N2  DOUB N N 61 
8R6 N2  N3  DOUB N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8R6 InChI            InChI                1.03  "InChI=1S/C22H25N5O9/c1-12-14-6-5-13(25-26-23)8-17(14)36-22(35)15(12)9-18(28)24-7-3-2-4-16(21(33)34)27(10-19(29)30)11-20(31)32/h5-6,8,16H,2-4,7,9-11H2,1H3,(H,24,28)(H,29,30)(H,31,32)(H,33,34)/t16-/m0/s1" 
8R6 InChIKey         InChI                1.03  PXHFYCYQDOVEPO-INIZCTEOSA-N                                                                                                                                                                                 
8R6 SMILES_CANONICAL CACTVS               3.385 "CC1=C(CC(=O)NCCCC[C@H](N(CC(O)=O)CC(O)=O)C(O)=O)C(=O)Oc2cc(ccc12)N=[N+]=[N-]"                                                                                                                              
8R6 SMILES           CACTVS               3.385 "CC1=C(CC(=O)NCCCC[CH](N(CC(O)=O)CC(O)=O)C(O)=O)C(=O)Oc2cc(ccc12)N=[N+]=[N-]"                                                                                                                               
8R6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC1=C(C(=O)Oc2c1ccc(c2)N=[N+]=[N-])CC(=O)NCCCC[C@@H](C(=O)O)N(CC(=O)O)CC(=O)O"                                                                                                                             
8R6 SMILES           "OpenEye OEToolkits" 2.0.6 "CC1=C(C(=O)Oc2c1ccc(c2)N=[N+]=[N-])CC(=O)NCCCCC(C(=O)O)N(CC(=O)O)CC(=O)O"                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8R6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-6-[2-(7-azido-4-methyl-2-oxidanylidene-chromen-3-yl)ethanoylamino]-2-[bis(2-hydroxy-2-oxoethyl)amino]hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8R6 "Create component" 2017-08-30 PDBJ 
8R6 "Initial release"  2018-01-24 RCSB 
# 
