data_8M6
# 
_chem_comp.id                                    8M6 
_chem_comp.name                                  "2-[[11-ethanoyl-4-(furan-2-ylmethyl)-3-oxidanylidene-8-thia-4,6,11-triazatricyclo[7.4.0.0^{2,7}]trideca-1(9),2(7),5-trien-5-yl]sulfanyl]-~{N}-(2-methylpyridin-3-yl)ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H23 N5 O4 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-10-28 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        509.601 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8M6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Q3F 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8M6 N1  N1  N 0 1 N N N 15.990 4.450  7.041  -0.263 -0.553 0.002  N1  8M6 1  
8M6 N3  N2  N 0 1 N N N 12.725 6.154  11.841 -6.350 -1.569 -0.417 N3  8M6 2  
8M6 C4  C1  C 0 1 N N N 14.866 2.508  8.762  -2.173 1.390  0.681  C4  8M6 3  
8M6 C5  C2  C 0 1 Y N N 14.131 5.892  10.005 -3.940 -1.604 -0.594 C5  8M6 4  
8M6 C6  C3  C 0 1 Y N N 13.971 4.548  10.069 -3.903 -0.364 -0.092 C6  8M6 5  
8M6 C7  C4  C 0 1 N N N 13.663 6.863  11.012 -5.219 -2.342 -0.953 C7  8M6 6  
8M6 C8  C5  C 0 1 N N N 13.252 4.905  12.370 -6.328 -0.110 -0.597 C8  8M6 7  
8M6 C10 C6  C 0 1 N N N 11.497 6.657  11.977 -7.371 -2.178 0.218  C10 8M6 8  
8M6 C13 C7  C 0 1 Y N N 14.533 0.543  6.506  -0.135 3.826  0.213  C13 8M6 9  
8M6 C15 C8  C 0 1 Y N N 12.840 0.431  5.066  -0.412 5.383  -1.339 C15 8M6 10 
8M6 C17 C9  C 0 1 N N N 18.727 3.587  5.690  2.506  -0.567 0.132  C17 8M6 11 
8M6 C20 C10 C 0 1 Y N N 18.649 8.005  4.402  6.957  -2.557 -0.038 C20 8M6 12 
8M6 C21 C11 C 0 1 Y N N 20.125 9.330  3.208  8.877  -1.290 -0.163 C21 8M6 13 
8M6 C22 C12 C 0 1 Y N N 21.179 8.462  3.400  8.150  -0.122 -0.297 C22 8M6 14 
8M6 C24 C13 C 0 1 N N N 17.249 7.817  4.915  6.315  -3.913 0.106  C24 8M6 15 
8M6 C1  C14 C 0 1 N N N 16.186 3.191  6.822  0.070  0.629  0.487  C1  8M6 16 
8M6 C2  C15 C 0 1 Y N N 15.266 4.765  8.139  -1.575 -0.820 -0.168 C2  8M6 17 
8M6 C3  C16 C 0 1 Y N N 14.657 3.883  8.990  -2.560 0.116  0.158  C3  8M6 18 
8M6 N2  N3  N 0 1 N N N 15.638 2.193  7.621  -0.839 1.585  0.822  N2  8M6 19 
8M6 S1  S1  S 0 1 Y N N 14.922 6.396  8.548  -2.325 -2.272 -0.783 S1  8M6 20 
8M6 C9  C17 C 0 1 N N N 13.271 3.930  11.233 -5.149 0.464  0.191  C9  8M6 21 
8M6 C11 C18 C 0 1 N N N 10.560 5.962  12.895 -7.367 -3.676 0.388  C11 8M6 22 
8M6 O1  O1  O 0 1 N N N 11.191 7.748  11.461 -8.293 -1.521 0.651  O1  8M6 23 
8M6 C12 C19 C 0 1 N N N 15.775 0.764  7.290  -0.361 2.865  1.352  C12 8M6 24 
8M6 O2  O2  O 0 1 Y N N 13.453 0.015  7.164  1.012  3.979  -0.469 O2  8M6 25 
8M6 C14 C20 C 0 1 Y N N 12.433 -0.049 6.280  0.850  4.922  -1.412 C14 8M6 26 
8M6 C16 C21 C 0 1 Y N N 14.182 0.833  5.241  -1.048 4.672  -0.296 C16 8M6 27 
8M6 S2  S2  S 0 1 N N N 17.160 2.753  5.421  1.780  0.986  0.713  S2  8M6 28 
8M6 C18 C22 C 0 1 N N N 18.581 4.899  4.970  4.007  -0.490 0.237  C18 8M6 29 
8M6 O3  O3  O 0 1 N N N 17.760 5.032  4.074  4.535  0.516  0.662  O3  8M6 30 
8M6 N4  N4  N 0 1 N N N 19.402 5.879  5.388  4.763  -1.539 -0.142 N4  8M6 31 
8M6 C19 C23 C 0 1 Y N N 19.695 7.057  4.658  6.158  -1.427 -0.156 C19 8M6 32 
8M6 N5  N5  N 0 1 Y N N 18.887 9.121  3.690  8.271  -2.455 -0.045 N5  8M6 33 
8M6 C23 C24 C 0 1 Y N N 20.966 7.308  4.125  6.766  -0.181 -0.289 C23 8M6 34 
8M6 O4  O4  O 0 1 N N N 14.368 1.610  9.433  -2.990 2.244  0.980  O4  8M6 35 
8M6 H1  H1  H 0 1 N N N 14.508 7.225  11.615 -5.208 -3.337 -0.508 H1  8M6 36 
8M6 H2  H2  H 0 1 N N N 13.171 7.716  10.521 -5.307 -2.422 -2.036 H2  8M6 37 
8M6 H3  H3  H 0 1 N N N 12.605 4.533  13.178 -6.211 0.127  -1.654 H3  8M6 38 
8M6 H4  H4  H 0 1 N N N 14.271 5.057  12.756 -7.260 0.318  -0.228 H4  8M6 39 
8M6 H5  H5  H 0 1 N N N 12.255 0.490  4.160  -0.855 6.144  -1.963 H5  8M6 40 
8M6 H6  H6  H 0 1 N N N 19.557 3.002  5.268  2.140  -1.390 0.746  H6  8M6 41 
8M6 H7  H7  H 0 1 N N N 18.902 3.750  6.764  2.222  -0.735 -0.906 H7  8M6 42 
8M6 H8  H8  H 0 1 N N N 20.304 10.230 2.638  9.956  -1.249 -0.169 H8  8M6 43 
8M6 H9  H9  H 0 1 N N N 22.154 8.682  2.990  8.655  0.828  -0.393 H9  8M6 44 
8M6 H10 H10 H 0 1 N N N 16.626 8.669  4.604  6.159  -4.348 -0.881 H10 8M6 45 
8M6 H11 H11 H 0 1 N N N 16.830 6.887  4.504  6.966  -4.563 0.690  H11 8M6 46 
8M6 H12 H12 H 0 1 N N N 17.266 7.757  6.013  5.356  -3.809 0.613  H12 8M6 47 
8M6 H13 H13 H 0 1 N N N 12.239 3.676  10.949 -5.374 0.431  1.257  H13 8M6 48 
8M6 H14 H14 H 0 1 N N N 13.803 3.017  11.540 -4.977 1.497  -0.113 H14 8M6 49 
8M6 H15 H15 H 0 1 N N N 9.642  6.559  13.004 -6.488 -3.974 0.958  H15 8M6 50 
8M6 H16 H16 H 0 1 N N N 10.308 4.974  12.483 -8.267 -3.983 0.920  H16 8M6 51 
8M6 H17 H17 H 0 1 N N N 11.035 5.838  13.879 -7.344 -4.153 -0.592 H17 8M6 52 
8M6 H18 H18 H 0 1 N N N 15.800 0.139  8.195  0.575  2.710  1.888  H18 8M6 53 
8M6 H19 H19 H 0 1 N N N 16.675 0.572  6.687  -1.106 3.277  2.033  H19 8M6 54 
8M6 H20 H20 H 0 1 N N N 11.444 -0.423 6.500  1.605  5.256  -2.108 H20 8M6 55 
8M6 H21 H21 H 0 1 N N N 14.813 1.291  4.494  -2.069 4.791  0.034  H21 8M6 56 
8M6 H22 H22 H 0 1 N N N 19.838 5.768  6.281  4.341  -2.372 -0.405 H22 8M6 57 
8M6 H23 H23 H 0 1 N N N 21.771 6.605  4.280  6.173  0.715  -0.391 H23 8M6 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8M6 C21 C22 DOUB Y N 1  
8M6 C21 N5  SING Y N 2  
8M6 C22 C23 SING Y N 3  
8M6 N5  C20 DOUB Y N 4  
8M6 O3  C18 DOUB N N 5  
8M6 C23 C19 DOUB Y N 6  
8M6 C20 C19 SING Y N 7  
8M6 C20 C24 SING N N 8  
8M6 C19 N4  SING N N 9  
8M6 C18 N4  SING N N 10 
8M6 C18 C17 SING N N 11 
8M6 C15 C16 SING Y N 12 
8M6 C15 C14 DOUB Y N 13 
8M6 C16 C13 DOUB Y N 14 
8M6 S2  C17 SING N N 15 
8M6 S2  C1  SING N N 16 
8M6 C14 O2  SING Y N 17 
8M6 C13 O2  SING Y N 18 
8M6 C13 C12 SING N N 19 
8M6 C1  N1  DOUB N N 20 
8M6 C1  N2  SING N N 21 
8M6 N1  C2  SING N N 22 
8M6 C12 N2  SING N N 23 
8M6 N2  C4  SING N N 24 
8M6 C2  S1  SING Y N 25 
8M6 C2  C3  DOUB Y N 26 
8M6 S1  C5  SING Y N 27 
8M6 C4  C3  SING N N 28 
8M6 C4  O4  DOUB N N 29 
8M6 C3  C6  SING Y N 30 
8M6 C5  C6  DOUB Y N 31 
8M6 C5  C7  SING N N 32 
8M6 C6  C9  SING N N 33 
8M6 C7  N3  SING N N 34 
8M6 C9  C8  SING N N 35 
8M6 O1  C10 DOUB N N 36 
8M6 N3  C10 SING N N 37 
8M6 N3  C8  SING N N 38 
8M6 C10 C11 SING N N 39 
8M6 C7  H1  SING N N 40 
8M6 C7  H2  SING N N 41 
8M6 C8  H3  SING N N 42 
8M6 C8  H4  SING N N 43 
8M6 C15 H5  SING N N 44 
8M6 C17 H6  SING N N 45 
8M6 C17 H7  SING N N 46 
8M6 C21 H8  SING N N 47 
8M6 C22 H9  SING N N 48 
8M6 C24 H10 SING N N 49 
8M6 C24 H11 SING N N 50 
8M6 C24 H12 SING N N 51 
8M6 C9  H13 SING N N 52 
8M6 C9  H14 SING N N 53 
8M6 C11 H15 SING N N 54 
8M6 C11 H16 SING N N 55 
8M6 C11 H17 SING N N 56 
8M6 C12 H18 SING N N 57 
8M6 C12 H19 SING N N 58 
8M6 C14 H20 SING N N 59 
8M6 C16 H21 SING N N 60 
8M6 N4  H22 SING N N 61 
8M6 C23 H23 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8M6 InChI            InChI                1.06  "InChI=1S/C24H23N5O4S2/c1-14-18(6-3-8-25-14)26-20(31)13-34-24-27-22-21(23(32)29(24)11-16-5-4-10-33-16)17-7-9-28(15(2)30)12-19(17)35-22/h3-6,8,10H,7,9,11-13H2,1-2H3,(H,26,31)" 
8M6 InChIKey         InChI                1.06  PQYXGDZAWKQEEM-UHFFFAOYSA-N                                                                                                                                                    
8M6 SMILES_CANONICAL CACTVS               3.385 "CC(=O)N1CCc2c(C1)sc3N=C(SCC(=O)Nc4cccnc4C)N(Cc5occc5)C(=O)c23"                                                                                                                
8M6 SMILES           CACTVS               3.385 "CC(=O)N1CCc2c(C1)sc3N=C(SCC(=O)Nc4cccnc4C)N(Cc5occc5)C(=O)c23"                                                                                                                
8M6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cccn1)NC(=O)CSC2=Nc3c(c4c(s3)CN(CC4)C(=O)C)C(=O)N2Cc5ccco5"                                                                                                              
8M6 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(cccn1)NC(=O)CSC2=Nc3c(c4c(s3)CN(CC4)C(=O)C)C(=O)N2Cc5ccco5"                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           8M6 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-[[11-ethanoyl-4-(furan-2-ylmethyl)-3-oxidanylidene-8-thia-4,6,11-triazatricyclo[7.4.0.0^{2,7}]trideca-1(9),2(7),5-trien-5-yl]sulfanyl]-~{N}-(2-methylpyridin-3-yl)ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8M6 "Create component"  2021-10-28 PDBE 
8M6 "Initial release"   2022-04-20 RCSB 
8M6 "Modify descriptor" 2022-08-22 RCSB 
# 
