data_7A6
# 
_chem_comp.id                                    7A6 
_chem_comp.name                                  "(2S,3S,4R,5S)-2-(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)-5-[(propylsulfanyl)methyl]pyrrolidine-3,4-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H21 N5 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-09-20 
_chem_comp.pdbx_modified_date                    2017-10-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        323.414 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7A6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5TC6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7A6 "O3'" O1  O 0 1 N N N 62.443 17.546 32.510 1.119  -3.606 0.073  "O3'" 7A6 1  
7A6 "C3'" C1  C 0 1 N N R 61.535 17.654 31.403 1.167  -2.345 -0.596 "C3'" 7A6 2  
7A6 "C4'" C2  C 0 1 N N S 60.925 16.293 31.131 1.864  -1.296 0.289  "C4'" 7A6 3  
7A6 "C5'" C3  C 0 1 N N N 59.469 16.442 30.675 3.100  -0.747 -0.427 "C5'" 7A6 4  
7A6 "S5'" S1  S 0 1 N N N 58.900 14.980 29.847 3.993  0.377  0.683  "S5'" 7A6 5  
7A6 CS    C4  C 0 1 N N N 57.900 14.112 30.972 5.400  0.915  -0.327 CS    7A6 6  
7A6 "C2'" C5  C 0 1 N N S 62.233 18.058 30.095 -0.263 -1.802 -0.821 "C2'" 7A6 7  
7A6 "O2'" O2  O 0 1 N N N 63.577 18.526 30.278 -1.220 -2.862 -0.770 "O2'" 7A6 8  
7A6 "C1'" C6  C 0 1 N N S 62.208 16.834 29.163 -0.456 -0.831 0.371  "C1'" 7A6 9  
7A6 "N4'" N1  N 0 1 N N N 61.793 15.720 30.064 0.888  -0.209 0.524  "N4'" 7A6 10 
7A6 C9    C7  C 0 1 Y N N 61.359 16.909 27.928 -1.492 0.214  0.046  C9    7A6 11 
7A6 C4    C8  C 0 1 Y N N 60.689 18.076 27.363 -2.928 0.116  0.285  C4    7A6 12 
7A6 C5    C9  C 0 1 Y N N 60.028 17.552 26.167 -3.480 1.323  -0.178 C5    7A6 13 
7A6 N7    N2  N 0 1 Y N N 60.298 16.218 26.063 -2.445 2.088  -0.661 N7    7A6 14 
7A6 C8    C10 C 0 1 Y N N 61.083 15.819 27.110 -1.266 1.417  -0.516 C8    7A6 15 
7A6 N3    N3  N 0 1 Y N N 60.615 19.365 27.744 -3.735 -0.811 0.809  N3    7A6 16 
7A6 C2    C11 C 0 1 Y N N 59.896 20.206 26.980 -5.030 -0.597 0.890  C2    7A6 17 
7A6 N1    N4  N 0 1 Y N N 59.251 19.813 25.863 -5.589 0.523  0.467  N1    7A6 18 
7A6 C6    C12 C 0 1 Y N N 59.265 18.542 25.394 -4.864 1.500  -0.069 C6    7A6 19 
7A6 N6    N5  N 0 1 N N N 58.603 18.202 24.261 -5.465 2.668  -0.509 N6    7A6 20 
7A6 C1    C13 C 0 1 N N N 58.791 13.448 32.001 6.266  1.884  0.480  C1    7A6 21 
7A6 C3    C14 C 0 1 N N N 58.237 12.074 32.253 7.453  2.339  -0.372 C3    7A6 22 
7A6 H1    H1  H 0 1 N N N 61.963 17.295 33.290 0.672  -4.301 -0.428 H1    7A6 23 
7A6 H2    H2  H 0 1 N N N 60.736 18.377 31.626 1.689  -2.443 -1.549 H2    7A6 24 
7A6 H3    H3  H 0 1 N N N 60.970 15.671 32.037 2.155  -1.745 1.239  H3    7A6 25 
7A6 H4    H4  H 0 1 N N N 59.395 17.296 29.986 3.752  -1.572 -0.710 H4    7A6 26 
7A6 H5    H5  H 0 1 N N N 58.835 16.625 31.555 2.791  -0.205 -1.321 H5    7A6 27 
7A6 H6    H6  H 0 1 N N N 57.213 14.811 31.472 5.995  0.048  -0.613 H6    7A6 28 
7A6 H7    H7  H 0 1 N N N 57.319 13.347 30.437 5.033  1.416  -1.224 H7    7A6 29 
7A6 H8    H8  H 0 1 N N N 61.635 18.852 29.625 -0.329 -1.270 -1.770 H8    7A6 30 
7A6 H9    H9  H 0 1 N N N 63.574 19.281 30.855 -1.094 -3.539 -1.449 H9    7A6 31 
7A6 H10   H10 H 0 1 N N N 63.244 16.643 28.846 -0.730 -1.379 1.272  H10   7A6 32 
7A6 H11   H11 H 0 1 N N N 61.284 15.034 29.544 1.017  0.541  -0.139 H11   7A6 33 
7A6 H13   H13 H 0 1 N N N 59.971 15.621 25.330 -2.538 2.974  -1.045 H13   7A6 34 
7A6 H14   H14 H 0 1 N N N 61.435 14.811 27.276 -0.298 1.791  -0.813 H14   7A6 35 
7A6 H15   H15 H 0 1 N N N 59.832 21.243 27.274 -5.658 -1.364 1.318  H15   7A6 36 
7A6 H16   H16 H 0 1 N N N 58.149 19.009 23.885 -6.425 2.780  -0.427 H16   7A6 37 
7A6 H17   H17 H 0 1 N N N 59.252 17.842 23.591 -4.926 3.374  -0.898 H17   7A6 38 
7A6 H18   H18 H 0 1 N N N 59.819 13.375 31.617 5.671  2.752  0.766  H18   7A6 39 
7A6 H19   H19 H 0 1 N N N 58.789 14.032 32.933 6.632  1.384  1.376  H19   7A6 40 
7A6 H20   H20 H 0 1 N N N 58.860 11.558 32.998 8.069  3.029  0.203  H20   7A6 41 
7A6 H21   H21 H 0 1 N N N 57.207 12.158 32.631 8.048  1.471  -0.658 H21   7A6 42 
7A6 H22   H22 H 0 1 N N N 58.238 11.501 31.314 7.086  2.839  -1.269 H22   7A6 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7A6 N6    C6    SING N N 1  
7A6 C6    N1    DOUB Y N 2  
7A6 C6    C5    SING Y N 3  
7A6 N1    C2    SING Y N 4  
7A6 N7    C5    SING Y N 5  
7A6 N7    C8    SING Y N 6  
7A6 C5    C4    DOUB Y N 7  
7A6 C2    N3    DOUB Y N 8  
7A6 C8    C9    DOUB Y N 9  
7A6 C4    N3    SING Y N 10 
7A6 C4    C9    SING Y N 11 
7A6 C9    "C1'" SING N N 12 
7A6 "C1'" "N4'" SING N N 13 
7A6 "C1'" "C2'" SING N N 14 
7A6 "S5'" "C5'" SING N N 15 
7A6 "S5'" CS    SING N N 16 
7A6 "N4'" "C4'" SING N N 17 
7A6 "C2'" "O2'" SING N N 18 
7A6 "C2'" "C3'" SING N N 19 
7A6 "C5'" "C4'" SING N N 20 
7A6 CS    C1    SING N N 21 
7A6 "C4'" "C3'" SING N N 22 
7A6 "C3'" "O3'" SING N N 23 
7A6 C1    C3    SING N N 24 
7A6 "O3'" H1    SING N N 25 
7A6 "C3'" H2    SING N N 26 
7A6 "C4'" H3    SING N N 27 
7A6 "C5'" H4    SING N N 28 
7A6 "C5'" H5    SING N N 29 
7A6 CS    H6    SING N N 30 
7A6 CS    H7    SING N N 31 
7A6 "C2'" H8    SING N N 32 
7A6 "O2'" H9    SING N N 33 
7A6 "C1'" H10   SING N N 34 
7A6 "N4'" H11   SING N N 35 
7A6 N7    H13   SING N N 36 
7A6 C8    H14   SING N N 37 
7A6 C2    H15   SING N N 38 
7A6 N6    H16   SING N N 39 
7A6 N6    H17   SING N N 40 
7A6 C1    H18   SING N N 41 
7A6 C1    H19   SING N N 42 
7A6 C3    H20   SING N N 43 
7A6 C3    H21   SING N N 44 
7A6 C3    H22   SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7A6 SMILES           ACDLabs              12.01 "OC1C(CSCCC)NC(C1O)c3c2ncnc(c2nc3)N"                                                                                                                              
7A6 InChI            InChI                1.03  "InChI=1S/C14H21N5O2S/c1-2-3-22-5-8-12(20)13(21)10(19-8)7-4-16-11-9(7)17-6-18-14(11)15/h4,6,8,10,12-13,16,19-21H,2-3,5H2,1H3,(H2,15,17,18)/t8-,10+,12-,13+/m1/s1" 
7A6 InChIKey         InChI                1.03  SMSLFFRQRVMFGA-LGOOBZPGSA-N                                                                                                                                       
7A6 SMILES_CANONICAL CACTVS               3.385 "CCCSC[C@H]1N[C@H]([C@H](O)[C@@H]1O)c2c[nH]c3c(N)ncnc23"                                                                                                          
7A6 SMILES           CACTVS               3.385 "CCCSC[CH]1N[CH]([CH](O)[CH]1O)c2c[nH]c3c(N)ncnc23"                                                                                                               
7A6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCSC[C@@H]1[C@H]([C@H]([C@@H](N1)c2c[nH]c3c2ncnc3N)O)O"                                                                                                         
7A6 SMILES           "OpenEye OEToolkits" 2.0.6 "CCCSCC1C(C(C(N1)c2c[nH]c3c2ncnc3N)O)O"                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7A6 "SYSTEMATIC NAME" ACDLabs              12.01 "(2S,3S,4R,5S)-2-(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)-5-[(propylsulfanyl)methyl]pyrrolidine-3,4-diol"               
7A6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},3~{S},4~{R},5~{S})-2-(4-azanyl-5~{H}-pyrrolo[3,2-d]pyrimidin-7-yl)-5-(propylsulfanylmethyl)pyrrolidine-3,4-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7A6 "Create component" 2016-09-20 RCSB 
7A6 "Initial release"  2017-10-11 RCSB 
# 
