data_5Y6
# 
_chem_comp.id                                    5Y6 
_chem_comp.name                                  "8-[3-chloranyl-5-[1-methyl-2,2-bis(oxidanylidene)-3~{H}-2,1-benzothiazol-5-yl]pyridin-4-yl]-1-oxa-3,8-diazaspiro[4.5]decan-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H21 Cl N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-01-05 
_chem_comp.pdbx_modified_date                    2016-01-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        448.923 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5Y6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5HBE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5Y6 C2  C1  C  0 1 N N N -3.892 16.501 -14.266 4.723  -3.424 0.159  C2   5Y6 1  
5Y6 C4  C2  C  0 1 N N N -3.347 15.232 -12.432 4.636  -1.137 0.159  C4   5Y6 2  
5Y6 C5  C3  C  0 1 N N N -4.692 14.785 -13.038 3.217  -1.719 0.061  C5   5Y6 3  
5Y6 C6  C4  C  0 1 N N N -4.588 13.397 -13.665 2.384  -1.281 1.262  C6   5Y6 4  
5Y6 C7  C5  C  0 1 N N N -4.505 12.285 -12.613 2.182  0.236  1.212  C7   5Y6 5  
5Y6 C11 C6  C  0 1 Y N N -6.308 11.315 -11.169 1.192  1.953  -0.066 C11  5Y6 6  
5Y6 C12 C7  C  0 1 Y N N -7.174 10.627 -12.037 2.180  2.930  0.044  C12  5Y6 7  
5Y6 C16 C8  C  0 1 Y N N -6.951 9.720  -9.445  -0.419 3.734  -0.219 C16  5Y6 8  
5Y6 C17 C9  C  0 1 Y N N -6.205 10.828 -9.833  -0.142 2.371  -0.200 C17  5Y6 9  
5Y6 C18 C10 C  0 1 Y N N -5.319 11.477 -8.844  -1.236 1.377  -0.321 C18  5Y6 10 
5Y6 C19 C11 C  0 1 Y N N -3.951 11.510 -9.081  -2.366 1.473  0.482  C19  5Y6 11 
5Y6 C21 C12 C  0 1 N N N -1.589 12.218 -8.341  -4.683 0.520  1.179  C21  5Y6 12 
5Y6 C27 C13 C  0 1 Y N N -3.567 12.723 -7.035  -3.312 -0.490 -0.535 C27  5Y6 13 
5Y6 O1  O1  O  0 1 N N N -3.819 17.300 -15.175 5.170  -4.554 0.181  O1   5Y6 14 
5Y6 N3  N1  N  0 1 N N N -2.907 16.264 -13.382 5.496  -2.330 0.214  N3   5Y6 15 
5Y6 N8  N2  N  0 1 N N N -5.560 12.423 -11.593 1.519  0.601  -0.047 N8   5Y6 16 
5Y6 C9  C14 C  0 1 N N N -5.741 13.745 -10.971 2.346  0.243  -1.207 C9   5Y6 17 
5Y6 C10 C15 C  0 1 N N N -5.825 14.855 -12.021 2.553  -1.273 -1.238 C10  5Y6 18 
5Y6 CL  CL1 CL 0 0 N N N -7.419 11.089 -13.694 3.848  2.479  0.212  CL13 5Y6 19 
5Y6 C14 C16 C  0 1 Y N N -7.874 9.534  -11.554 1.816  4.261  0.016  C14  5Y6 20 
5Y6 N15 N3  N  0 1 Y N N -7.751 9.114  -10.303 0.552  4.620  -0.112 N15  5Y6 21 
5Y6 C20 C17 C  0 1 Y N N -3.092 12.122 -8.189  -3.393 0.546  0.373  C20  5Y6 22 
5Y6 S22 S1  S  0 1 N N N -1.209 13.449 -7.067  -5.535 -0.951 0.510  S22  5Y6 23 
5Y6 O23 O2  O  0 1 N N N -0.166 13.003 -6.220  -5.573 -2.007 1.460  O23  5Y6 24 
5Y6 O24 O3  O  0 1 N N N -1.235 14.752 -7.624  -6.677 -0.588 -0.254 O24  5Y6 25 
5Y6 N25 N4  N  0 1 N N N -2.621 13.332 -6.201  -4.380 -1.397 -0.600 N25  5Y6 26 
5Y6 C26 C18 C  0 1 N N N -2.836 13.821 -4.840  -4.467 -2.547 -1.503 C26  5Y6 27 
5Y6 C28 C19 C  0 1 Y N N -4.964 12.695 -6.802  -2.164 -0.576 -1.349 C28  5Y6 28 
5Y6 C29 C20 C  0 1 Y N N -5.824 12.086 -7.690  -1.147 0.337  -1.245 C29  5Y6 29 
5Y6 O30 O4  O  0 1 N N N -4.979 15.766 -14.064 3.414  -3.157 0.070  O30  5Y6 30 
5Y6 H1  H1  H  0 1 N N N -2.632 14.398 -12.390 4.867  -0.538 -0.722 H1   5Y6 31 
5Y6 H2  H2  H  0 1 N N N -3.483 15.650 -11.424 4.745  -0.541 1.065  H2   5Y6 32 
5Y6 H3  H3  H  0 1 N N N -5.476 13.225 -14.291 1.414  -1.778 1.232  H3   5Y6 33 
5Y6 H4  H4  H  0 1 N N N -3.684 13.359 -14.291 2.902  -1.549 2.182  H4   5Y6 34 
5Y6 H5  H5  H  0 1 N N N -4.617 11.312 -13.113 1.561  0.548  2.052  H5   5Y6 35 
5Y6 H6  H6  H  0 1 N N N -3.523 12.333 -12.120 3.150  0.734  1.270  H6   5Y6 36 
5Y6 H7  H7  H  0 1 N N N -6.875 9.352  -8.432  -1.440 4.071  -0.322 H7   5Y6 37 
5Y6 H8  H8  H  0 1 N N N -3.554 11.051 -9.974  -2.447 2.277  1.198  H8   5Y6 38 
5Y6 H9  H9  H  0 1 N N N -1.097 11.256 -8.136  -4.474 0.396  2.242  H9   5Y6 39 
5Y6 H10 H10 H  0 1 N N N -1.303 12.569 -9.344  -5.269 1.422  1.001  H10  5Y6 40 
5Y6 H11 H11 H  0 1 N N N -2.016 16.718 -13.372 6.464  -2.326 0.280  H11  5Y6 41 
5Y6 H12 H12 H  0 1 N N N -4.888 13.946 -10.306 1.845  0.560  -2.122 H12  5Y6 42 
5Y6 H13 H13 H  0 1 N N N -6.671 13.739 -10.383 3.313  0.741  -1.132 H13  5Y6 43 
5Y6 H14 H14 H  0 1 N N N -5.780 15.828 -11.510 3.192  -1.536 -2.082 H14  5Y6 44 
5Y6 H15 H15 H  0 1 N N N -6.783 14.764 -12.554 1.589  -1.770 -1.343 H15  5Y6 45 
5Y6 H16 H16 H  0 1 N N N -8.542 9.007  -12.219 2.578  5.022  0.100  H16  5Y6 46 
5Y6 H17 H17 H  0 1 N N N -1.912 14.285 -4.466  -3.570 -2.592 -2.120 H17  5Y6 47 
5Y6 H18 H18 H  0 1 N N N -3.646 14.566 -4.842  -4.552 -3.463 -0.918 H18  5Y6 48 
5Y6 H19 H19 H  0 1 N N N -3.113 12.980 -4.188  -5.343 -2.442 -2.142 H19  5Y6 49 
5Y6 H20 H20 H  0 1 N N N -5.362 13.159 -5.912  -2.084 -1.377 -2.069 H20  5Y6 50 
5Y6 H21 H21 H  0 1 N N N -6.886 12.079 -7.495  -0.277 0.251  -1.880 H21  5Y6 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5Y6 O1  C2  DOUB N N 1  
5Y6 C2  O30 SING N N 2  
5Y6 C2  N3  SING N N 3  
5Y6 O30 C5  SING N N 4  
5Y6 CL  C12 SING N N 5  
5Y6 C6  C5  SING N N 6  
5Y6 C6  C7  SING N N 7  
5Y6 N3  C4  SING N N 8  
5Y6 C5  C4  SING N N 9  
5Y6 C5  C10 SING N N 10 
5Y6 C7  N8  SING N N 11 
5Y6 C12 C14 DOUB Y N 12 
5Y6 C12 C11 SING Y N 13 
5Y6 C10 C9  SING N N 14 
5Y6 N8  C11 SING N N 15 
5Y6 N8  C9  SING N N 16 
5Y6 C14 N15 SING Y N 17 
5Y6 C11 C17 DOUB Y N 18 
5Y6 N15 C16 DOUB Y N 19 
5Y6 C17 C16 SING Y N 20 
5Y6 C17 C18 SING N N 21 
5Y6 C19 C18 DOUB Y N 22 
5Y6 C19 C20 SING Y N 23 
5Y6 C18 C29 SING Y N 24 
5Y6 C21 C20 SING N N 25 
5Y6 C21 S22 SING N N 26 
5Y6 C20 C27 DOUB Y N 27 
5Y6 C29 C28 DOUB Y N 28 
5Y6 O24 S22 DOUB N N 29 
5Y6 S22 O23 DOUB N N 30 
5Y6 S22 N25 SING N N 31 
5Y6 C27 C28 SING Y N 32 
5Y6 C27 N25 SING N N 33 
5Y6 N25 C26 SING N N 34 
5Y6 C4  H1  SING N N 35 
5Y6 C4  H2  SING N N 36 
5Y6 C6  H3  SING N N 37 
5Y6 C6  H4  SING N N 38 
5Y6 C7  H5  SING N N 39 
5Y6 C7  H6  SING N N 40 
5Y6 C16 H7  SING N N 41 
5Y6 C19 H8  SING N N 42 
5Y6 C21 H9  SING N N 43 
5Y6 C21 H10 SING N N 44 
5Y6 N3  H11 SING N N 45 
5Y6 C9  H12 SING N N 46 
5Y6 C9  H13 SING N N 47 
5Y6 C10 H14 SING N N 48 
5Y6 C10 H15 SING N N 49 
5Y6 C14 H16 SING N N 50 
5Y6 C26 H17 SING N N 51 
5Y6 C26 H18 SING N N 52 
5Y6 C26 H19 SING N N 53 
5Y6 C28 H20 SING N N 54 
5Y6 C29 H21 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5Y6 InChI            InChI                1.03  "InChI=1S/C20H21ClN4O4S/c1-24-17-3-2-13(8-14(17)11-30(24,27)28)15-9-22-10-16(21)18(15)25-6-4-20(5-7-25)12-23-19(26)29-20/h2-3,8-10H,4-7,11-12H2,1H3,(H,23,26)" 
5Y6 InChIKey         InChI                1.03  ZNMSRFYDOSAZLZ-UHFFFAOYSA-N                                                                                                                                    
5Y6 SMILES_CANONICAL CACTVS               3.385 "CN1c2ccc(cc2C[S]1(=O)=O)c3cncc(Cl)c3N4CCC5(CC4)CNC(=O)O5"                                                                                                     
5Y6 SMILES           CACTVS               3.385 "CN1c2ccc(cc2C[S]1(=O)=O)c3cncc(Cl)c3N4CCC5(CC4)CNC(=O)O5"                                                                                                     
5Y6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CN1c2ccc(cc2CS1(=O)=O)c3cncc(c3N4CCC5(CC4)CNC(=O)O5)Cl"                                                                                                       
5Y6 SMILES           "OpenEye OEToolkits" 2.0.4 "CN1c2ccc(cc2CS1(=O)=O)c3cncc(c3N4CCC5(CC4)CNC(=O)O5)Cl"                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5Y6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "8-[3-chloranyl-5-[1-methyl-2,2-bis(oxidanylidene)-3~{H}-2,1-benzothiazol-5-yl]pyridin-4-yl]-1-oxa-3,8-diazaspiro[4.5]decan-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5Y6 "Create component" 2016-01-05 EBI  
5Y6 "Initial release"  2016-02-03 RCSB 
# 
