data_3Y6
# 
_chem_comp.id                                    3Y6 
_chem_comp.name                                  "3-[(2R)-2-(dihydroxyboranyl)-2-{[(2R)-2-{[(4-ethyl-2,3-dioxo-3,4-dihydropyrazin-1(2H)-yl)carbonyl]amino}-2-(4-hydroxyphenyl)acetyl]amino}ethyl]benzoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H25 B N4 O9" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-12-09 
_chem_comp.pdbx_modified_date                    2015-12-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        524.288 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3Y6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4X6T 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3Y6 N   N1  N 0 1 N N N -13.126 -18.077 3.759  -2.161 0.243  -0.244 N   3Y6 1  
3Y6 CA  C1  C 0 1 N N R -13.650 -16.862 3.278  -0.994 -0.481 -0.753 CA  3Y6 2  
3Y6 C   C2  C 0 1 N N N -13.332 -15.859 4.365  0.265  0.173  -0.245 C   3Y6 3  
3Y6 O   O1  O 0 1 N N N -12.855 -16.200 5.432  0.195  1.148  0.472  O   3Y6 4  
3Y6 OAA O2  O 0 1 N N N -11.694 -19.420 5.530  -5.721 0.002  -2.040 OAA 3Y6 5  
3Y6 CAB C3  C 0 1 N N N -12.062 -20.589 4.855  -5.622 0.642  -1.012 CAB 3Y6 6  
3Y6 CAC C4  C 0 1 N N N -11.638 -21.820 5.253  -6.815 1.297  -0.403 CAC 3Y6 7  
3Y6 OAD O3  O 0 1 N N N -10.784 -21.845 6.355  -7.909 1.203  -0.924 OAD 3Y6 8  
3Y6 NAE N2  N 0 1 N N N -11.924 -22.808 4.728  -6.652 1.996  0.741  NAE 3Y6 9  
3Y6 CAF C5  C 0 1 N N N -11.387 -24.034 5.258  -7.802 2.653  1.368  CAF 3Y6 10 
3Y6 CAG C6  C 0 1 N N N -12.434 -24.759 6.079  -8.465 1.689  2.353  CAG 3Y6 11 
3Y6 CAH C7  C 0 1 N N N -12.607 -22.903 3.798  -5.403 2.091  1.318  CAH 3Y6 12 
3Y6 CAI C8  C 0 1 N N N -13.205 -21.871 3.129  -4.339 1.508  0.778  CAI 3Y6 13 
3Y6 NAJ N3  N 0 1 N N N -12.954 -20.491 3.670  -4.430 0.771  -0.390 NAJ 3Y6 14 
3Y6 CAK C9  C 0 1 N N N -13.482 -19.278 3.127  -3.330 0.193  -0.912 CAK 3Y6 15 
3Y6 OAL O4  O 0 1 N N N -14.208 -19.293 2.170  -3.392 -0.374 -1.985 OAL 3Y6 16 
3Y6 CAO C10 C 0 1 Y N N -13.087 -16.397 1.939  -1.044 -1.911 -0.278 CAO 3Y6 17 
3Y6 CAP C11 C 0 1 Y N N -11.816 -15.836 1.860  -0.678 -2.935 -1.132 CAP 3Y6 18 
3Y6 CAQ C12 C 0 1 Y N N -11.313 -15.407 0.635  -0.723 -4.246 -0.699 CAQ 3Y6 19 
3Y6 CAR C13 C 0 1 Y N N -12.082 -15.528 -0.514 -1.137 -4.535 0.593  CAR 3Y6 20 
3Y6 OAS O5  O 0 1 N N N -11.560 -15.081 -1.752 -1.187 -5.824 1.020  OAS 3Y6 21 
3Y6 CAT C14 C 0 1 Y N N -13.357 -16.077 -0.447 -1.503 -3.505 1.448  CAT 3Y6 22 
3Y6 CAU C15 C 0 1 Y N N -13.861 -16.501 0.786  -1.451 -2.195 1.012  CAU 3Y6 23 
3Y6 NAX N4  N 0 1 N N N -13.634 -14.481 4.070  1.469  -0.327 -0.587 NAX 3Y6 24 
3Y6 CAY C16 C 0 1 N N R -13.367 -13.480 5.045  2.693  0.309  -0.093 CAY 3Y6 25 
3Y6 BAY B1  B 0 1 N N N -14.788 -12.689 5.153  3.365  1.124  -1.255 BAY 3Y6 26 
3Y6 OBB O6  O 0 1 N N N -15.922 -13.452 5.592  3.560  2.524  -1.120 OBB 3Y6 27 
3Y6 OBA O7  O 0 1 N N N -15.013 -11.642 4.186  3.777  0.461  -2.441 OBA 3Y6 28 
3Y6 CBC C17 C 0 1 N N N -12.358 -12.493 4.498  3.662  -0.766 0.402  CBC 3Y6 29 
3Y6 CBD C18 C 0 1 Y N N -10.835 -12.732 4.640  4.921  -0.112 0.910  CBD 3Y6 30 
3Y6 CBE C19 C 0 1 Y N N -10.084 -12.817 3.471  5.973  0.120  0.048  CBE 3Y6 31 
3Y6 CBI C20 C 0 1 Y N N -8.706  -12.995 3.552  7.138  0.726  0.520  CBI 3Y6 32 
3Y6 CBJ C21 C 0 1 N N N -7.883  -13.105 2.282  8.268  0.978  -0.398 CBJ 3Y6 33 
3Y6 OBL O8  O 0 1 N N N -8.458  -13.247 1.178  8.184  0.657  -1.566 OBL 3Y6 34 
3Y6 OBK O9  O 0 1 N N N -6.626  -13.045 2.340  9.391  1.563  0.061  OBK 3Y6 35 
3Y6 CBH C22 C 0 1 Y N N -8.083  -13.074 4.789  7.231  1.095  1.864  CBH 3Y6 36 
3Y6 CBG C23 C 0 1 Y N N -8.835  -12.969 5.952  6.172  0.857  2.715  CBG 3Y6 37 
3Y6 CBF C24 C 0 1 Y N N -10.214 -12.789 5.890  5.018  0.260  2.239  CBF 3Y6 38 
3Y6 H1  H1  H 0 1 N N N -12.506 -18.084 4.544  -2.093 0.757  0.576  H1  3Y6 39 
3Y6 H2  H2  H 0 1 N N N -14.743 -16.938 3.184  -1.000 -0.460 -1.843 H2  3Y6 40 
3Y6 H3  H3  H 0 1 N N N -11.068 -24.679 4.426  -7.466 3.543  1.901  H3  3Y6 41 
3Y6 H4  H4  H 0 1 N N N -10.521 -23.804 5.896  -8.521 2.939  0.600  H4  3Y6 42 
3Y6 H5  H5  H 0 1 N N N -12.008 -25.692 6.476  -7.747 1.402  3.121  H5  3Y6 43 
3Y6 H6  H6  H 0 1 N N N -12.754 -24.118 6.914  -9.321 2.177  2.820  H6  3Y6 44 
3Y6 H7  H7  H 0 1 N N N -13.301 -24.993 5.443  -8.801 0.799  1.821  H7  3Y6 45 
3Y6 H8  H8  H 0 1 N N N -12.789 -23.900 3.424  -5.287 2.653  2.233  H8  3Y6 46 
3Y6 H9  H9  H 0 1 N N N -13.824 -22.038 2.260  -3.380 1.605  1.266  H9  3Y6 47 
3Y6 H10 H10 H 0 1 N N N -11.217 -15.733 2.753  -0.356 -2.710 -2.138 H10 3Y6 48 
3Y6 H11 H11 H 0 1 N N N -10.323 -14.979 0.579  -0.438 -5.046 -1.367 H11 3Y6 49 
3Y6 H12 H12 H 0 1 N N N -10.684 -14.736 -1.621 -2.036 -6.259 0.859  H12 3Y6 50 
3Y6 H13 H13 H 0 1 N N N -13.954 -16.175 -1.341 -1.826 -3.728 2.454  H13 3Y6 51 
3Y6 H14 H14 H 0 1 N N N -14.858 -16.912 0.845  -1.736 -1.394 1.677  H14 3Y6 52 
3Y6 H15 H15 H 0 1 N N N -14.029 -14.230 3.186  1.526  -1.107 -1.161 H15 3Y6 53 
3Y6 H16 H16 H 0 1 N N N -13.070 -13.881 6.025  2.447  0.983  0.728  H16 3Y6 54 
3Y6 H17 H17 H 0 1 N N N -15.641 -14.104 6.223  3.981  2.938  -1.886 H17 3Y6 55 
3Y6 H18 H18 H 0 1 N N N -15.864 -11.249 4.337  4.180  1.045  -3.098 H18 3Y6 56 
3Y6 H19 H19 H 0 1 N N N -12.568 -11.531 4.987  3.196  -1.332 1.209  H19 3Y6 57 
3Y6 H20 H20 H 0 1 N N N -12.560 -12.408 3.420  3.909  -1.439 -0.419 H20 3Y6 58 
3Y6 H21 H21 H 0 1 N N N -10.567 -12.745 2.508  5.895  -0.168 -0.990 H21 3Y6 59 
3Y6 H22 H22 H 0 1 N N N -6.264  -13.123 1.465  10.104 1.707  -0.577 H22 3Y6 60 
3Y6 H23 H23 H 0 1 N N N -7.014  -13.217 4.848  8.130  1.564  2.236  H23 3Y6 61 
3Y6 H24 H24 H 0 1 N N N -8.346  -13.028 6.913  6.242  1.141  3.755  H24 3Y6 62 
3Y6 H25 H25 H 0 1 N N N -10.795 -12.695 6.795  4.190  0.080  2.909  H25 3Y6 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3Y6 OAS CAR SING N N 1  
3Y6 CAR CAT DOUB Y N 2  
3Y6 CAR CAQ SING Y N 3  
3Y6 CAT CAU SING Y N 4  
3Y6 CAQ CAP DOUB Y N 5  
3Y6 CAU CAO DOUB Y N 6  
3Y6 OBL CBJ DOUB N N 7  
3Y6 CAP CAO SING Y N 8  
3Y6 CAO CA  SING N N 9  
3Y6 OAL CAK DOUB N N 10 
3Y6 CBJ OBK SING N N 11 
3Y6 CBJ CBI SING N N 12 
3Y6 CAK NAJ SING N N 13 
3Y6 CAK N   SING N N 14 
3Y6 CAI NAJ SING N N 15 
3Y6 CAI CAH DOUB N N 16 
3Y6 CA  N   SING N N 17 
3Y6 CA  C   SING N N 18 
3Y6 CBE CBI DOUB Y N 19 
3Y6 CBE CBD SING Y N 20 
3Y6 CBI CBH SING Y N 21 
3Y6 NAJ CAB SING N N 22 
3Y6 CAH NAE SING N N 23 
3Y6 NAX C   SING N N 24 
3Y6 NAX CAY SING N N 25 
3Y6 OBA BAY SING N N 26 
3Y6 C   O   DOUB N N 27 
3Y6 CBC CBD SING N N 28 
3Y6 CBC CAY SING N N 29 
3Y6 CBD CBF DOUB Y N 30 
3Y6 NAE CAC SING N N 31 
3Y6 NAE CAF SING N N 32 
3Y6 CBH CBG DOUB Y N 33 
3Y6 CAB CAC SING N N 34 
3Y6 CAB OAA DOUB N N 35 
3Y6 CAY BAY SING N N 36 
3Y6 BAY OBB SING N N 37 
3Y6 CAC OAD DOUB N N 38 
3Y6 CAF CAG SING N N 39 
3Y6 CBF CBG SING Y N 40 
3Y6 N   H1  SING N N 41 
3Y6 CA  H2  SING N N 42 
3Y6 CAF H3  SING N N 43 
3Y6 CAF H4  SING N N 44 
3Y6 CAG H5  SING N N 45 
3Y6 CAG H6  SING N N 46 
3Y6 CAG H7  SING N N 47 
3Y6 CAH H8  SING N N 48 
3Y6 CAI H9  SING N N 49 
3Y6 CAP H10 SING N N 50 
3Y6 CAQ H11 SING N N 51 
3Y6 OAS H12 SING N N 52 
3Y6 CAT H13 SING N N 53 
3Y6 CAU H14 SING N N 54 
3Y6 NAX H15 SING N N 55 
3Y6 CAY H16 SING N N 56 
3Y6 OBB H17 SING N N 57 
3Y6 OBA H18 SING N N 58 
3Y6 CBC H19 SING N N 59 
3Y6 CBC H20 SING N N 60 
3Y6 CBE H21 SING N N 61 
3Y6 OBK H22 SING N N 62 
3Y6 CBH H23 SING N N 63 
3Y6 CBG H24 SING N N 64 
3Y6 CBF H25 SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3Y6 SMILES           ACDLabs              12.01 "O=C3C(=O)N(C=CN3C(=O)NC(c1ccc(O)cc1)C(=O)NC(B(O)O)Cc2cccc(C(=O)O)c2)CC" 
3Y6 InChI            InChI                1.03  
"InChI=1S/C24H25BN4O9/c1-2-28-10-11-29(22(33)21(28)32)24(36)27-19(15-6-8-17(30)9-7-15)20(31)26-18(25(37)38)13-14-4-3-5-16(12-14)23(34)35/h3-12,18-19,30,37-38H,2,13H2,1H3,(H,26,31)(H,27,36)(H,34,35)/t18-,19+/m0/s1" 
3Y6 InChIKey         InChI                1.03  ALFFAZKBOABSLT-RBUKOAKNSA-N 
3Y6 SMILES_CANONICAL CACTVS               3.385 "CCN1C=CN(C(=O)N[C@@H](C(=O)N[C@@H](Cc2cccc(c2)C(O)=O)B(O)O)c3ccc(O)cc3)C(=O)C1=O" 
3Y6 SMILES           CACTVS               3.385 "CCN1C=CN(C(=O)N[CH](C(=O)N[CH](Cc2cccc(c2)C(O)=O)B(O)O)c3ccc(O)cc3)C(=O)C1=O" 
3Y6 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "B([C@H](Cc1cccc(c1)C(=O)O)NC(=O)[C@@H](c2ccc(cc2)O)NC(=O)N3C=CN(C(=O)C3=O)CC)(O)O" 
3Y6 SMILES           "OpenEye OEToolkits" 1.9.2 "B(C(Cc1cccc(c1)C(=O)O)NC(=O)C(c2ccc(cc2)O)NC(=O)N3C=CN(C(=O)C3=O)CC)(O)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3Y6 "SYSTEMATIC NAME" ACDLabs              12.01 "3-[(2R)-2-(dihydroxyboranyl)-2-{[(2R)-2-{[(4-ethyl-2,3-dioxo-3,4-dihydropyrazin-1(2H)-yl)carbonyl]amino}-2-(4-hydroxyphenyl)acetyl]amino}ethyl]benzoic acid" 
3Y6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "3-[(2R)-2-(dihydroxyboranyl)-2-[[(2R)-2-[[4-ethyl-2,3-bis(oxidanylidene)pyrazin-1-yl]carbonylamino]-2-(4-hydroxyphenyl)ethanoyl]amino]ethyl]benzoic acid"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3Y6 "Create component" 2014-12-09 RCSB 
3Y6 "Initial release"  2015-12-23 RCSB 
# 
