data_0W6
# 
_chem_comp.id                                    0W6 
_chem_comp.name                                  "(4S)-4-aminopentanoic acid" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C5 H11 N O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(2E,4S)-4-aminopent-2-enoic acid, Bound form" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-07-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        117.146 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0W6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4FZC 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0W6 N   N14 N 0 1 N N N Y Y N 56.685 -156.798 11.733 2.181  1.255  0.533  N14 SC3 1  
0W6 CA  C15 C 0 1 N N S Y N N 57.324 -156.478 10.476 1.912  0.121  -0.361 C15 SC3 2  
0W6 C16 C16 C 0 1 N N N N N N 57.628 -157.771 9.750  2.995  -0.944 -0.175 C16 SC3 3  
0W6 C17 C17 C 0 1 N N N Y N N 56.432 -155.633 9.585  0.545  -0.479 -0.026 C17 SC3 4  
0W6 C18 C18 C 0 1 N N N Y N N 55.971 -154.346 10.266 -0.550 0.545  -0.331 C18 SC3 5  
0W6 C   C19 C 0 1 N N N Y N Y 54.602 -154.507 10.866 -1.897 -0.045 -0.001 C19 SC3 6  
0W6 O   O20 O 0 1 N N N Y N Y 53.700 -155.059 10.207 -1.973 -1.170 0.434  O20 SC3 7  
0W6 H   H10 H 0 1 N N N Y Y N 57.303 -157.354 12.290 2.121  0.975  1.500  H10 SC3 8  
0W6 HA  H11 H 0 1 N N N Y N N 58.265 -155.938 10.658 1.914  0.465  -1.395 H11 SC3 9  
0W6 H12 H12 H 0 1 N N N N N N 58.275 -158.401 10.378 2.993  -1.288 0.859  H12 SC3 10 
0W6 H13 H13 H 0 1 N N N N N N 56.689 -158.304 9.541  2.795  -1.785 -0.839 H13 SC3 11 
0W6 H14 H14 H 0 1 N N N N N N 58.141 -157.548 8.803  3.969  -0.516 -0.414 H14 SC3 12 
0W6 H15 H15 H 0 1 N N N Y N N 55.545 -156.224 9.312  0.383  -1.373 -0.628 H15 SC3 13 
0W6 H16 H16 H 0 1 N N N Y N N 56.991 -155.369 8.675  0.512  -0.742 1.031  H16 SC3 14 
0W6 H17 H17 H 0 1 N N N Y N N 56.684 -154.087 11.063 -0.388 1.440  0.271  H17 SC3 15 
0W6 H18 H18 H 0 1 N N N Y N N 55.943 -153.537 9.522  -0.518 0.808  -1.388 H18 SC3 16 
0W6 OXT OXT O 0 1 N Y N Y N Y ?      ?        ?      -3.011 0.678  -0.189 OXT SC3 17 
0W6 HXT HXT H 0 1 N Y N Y N Y ?      ?        ?      -3.852 0.257  0.037  HXT SC3 18 
0W6 H2  H2  H 0 1 N Y N Y Y N 56.467 -155.953 12.221 3.079  1.669  0.331  H2  SC3 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0W6 C17 C18 SING N N 1  
0W6 C17 CA  SING N N 2  
0W6 C16 CA  SING N N 3  
0W6 O   C   DOUB N N 4  
0W6 C18 C   SING N N 5  
0W6 CA  N   SING N N 6  
0W6 N   H   SING N N 7  
0W6 CA  HA  SING N N 8  
0W6 C16 H12 SING N N 9  
0W6 C16 H13 SING N N 10 
0W6 C16 H14 SING N N 11 
0W6 C17 H15 SING N N 12 
0W6 C17 H16 SING N N 13 
0W6 C18 H17 SING N N 14 
0W6 C18 H18 SING N N 15 
0W6 C   OXT SING N N 16 
0W6 OXT HXT SING N N 17 
0W6 N   H2  SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0W6 SMILES           ACDLabs              12.01 "O=C(O)CCC(N)C"                                                        
0W6 InChI            InChI                1.03  "InChI=1S/C5H11NO2/c1-4(6)2-3-5(7)8/h4H,2-3,6H2,1H3,(H,7,8)/t4-/m0/s1" 
0W6 InChIKey         InChI                1.03  ABSTXSZPGHDTAF-BYPYZUCNSA-N                                            
0W6 SMILES_CANONICAL CACTVS               3.370 "C[C@H](N)CCC(O)=O"                                                    
0W6 SMILES           CACTVS               3.370 "C[CH](N)CCC(O)=O"                                                     
0W6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H](CCC(=O)O)N"                                                   
0W6 SMILES           "OpenEye OEToolkits" 1.7.6 "CC(CCC(=O)O)N"                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0W6 "SYSTEMATIC NAME" ACDLabs              12.01 "(4S)-4-aminopentanoic acid"  
0W6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(4S)-4-azanylpentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0W6 "Create component" 2012-07-19 RCSB 
0W6 "Initial release"  2012-10-19 RCSB 
0W6 "Modify synonyms"  2021-03-13 RCSB 
0W6 "Modify backbone"  2023-11-03 PDBE 
0W6 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      0W6 
_pdbx_chem_comp_synonyms.name         "(2E,4S)-4-aminopent-2-enoic acid, Bound form" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            0W6 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
