data_0V6
# 
_chem_comp.id                                    0V6 
_chem_comp.name                                  "(2Z,6S)-6-{3-chloro-5-[5-(prop-1-yn-1-yl)pyridin-3-yl]thiophen-2-yl}-2-imino-3,6-dimethyltetrahydropyrimidin-4(1H)-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H17 Cl N4 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-06-29 
_chem_comp.pdbx_modified_date                    2012-11-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        372.872 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0V6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4FRS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0V6 C2  C2  C  0 1 Y N N 20.744 34.260 55.825 1.441  0.547  -0.703 C2  0V6 1  
0V6 S1  S1  S  0 1 Y N N 19.229 34.972 56.224 0.504  -0.931 -0.874 S1  0V6 2  
0V6 C3  C3  C  0 1 Y N N 20.557 33.326 54.844 0.636  1.554  -0.350 C3  0V6 3  
0V6 C4  C4  C  0 1 Y N N 19.189 33.176 54.407 -0.694 1.216  -0.206 C4  0V6 4  
0V6 C5  C5  C  0 1 Y N N 18.340 34.062 55.104 -0.976 -0.079 -0.453 C5  0V6 5  
0V6 C6  C6  C  0 1 N N N 22.685 33.474 57.192 3.501  -0.706 -1.305 C6  0V6 6  
0V6 C7  C7  C  0 1 N N N 21.812 32.885 58.325 3.560  -1.605 -0.102 C7  0V6 7  
0V6 N8  N8  N  0 1 N N N 21.013 33.809 59.099 3.581  -1.134 1.153  N8  0V6 8  
0V6 C9  C9  C  0 1 N N N 21.023 35.178 58.869 3.485  0.223  1.409  C9  0V6 9  
0V6 N10 N10 N  0 1 N N N 21.694 35.614 57.719 3.580  1.090  0.334  N10 0V6 10 
0V6 C11 C11 C  0 1 N N S 22.001 34.704 56.557 2.929  0.660  -0.917 C11 0V6 11 
0V6 C12 C12 C  0 1 N N N 22.982 35.513 55.644 3.216  1.675  -2.026 C12 0V6 12 
0V6 CL  CL  CL 0 0 N N N 21.880 32.436 54.195 1.221  3.168  -0.092 CL  0V6 13 
0V6 C14 C14 C  0 1 Y N N 16.885 34.161 55.019 -2.319 -0.692 -0.369 C14 0V6 14 
0V6 C15 C15 C  0 1 Y N N 16.146 34.843 56.025 -3.428 0.079  -0.011 C15 0V6 15 
0V6 C16 C16 C  0 1 Y N N 14.731 34.862 56.032 -4.674 -0.550 0.053  C16 0V6 16 
0V6 C17 C17 C  0 1 Y N N 14.072 34.194 54.994 -4.762 -1.911 -0.241 C17 0V6 17 
0V6 N18 N18 N  0 1 Y N N 14.757 33.537 53.981 -3.691 -2.602 -0.575 N18 0V6 18 
0V6 C19 C19 C  0 1 Y N N 16.131 33.523 54.000 -2.499 -2.047 -0.652 C19 0V6 19 
0V6 N20 N20 N  0 1 N N N 20.523 36.037 59.738 3.311  0.669  2.620  N20 0V6 20 
0V6 O21 O21 O  0 1 N N N 21.833 31.669 58.535 3.588  -2.805 -0.274 O21 0V6 21 
0V6 C22 C22 C  0 1 N N N 20.161 33.241 60.202 3.707  -2.071 2.272  C22 0V6 22 
0V6 C23 C23 C  0 1 N N N 13.995 35.513 57.066 -5.844 0.192  0.415  C23 0V6 23 
0V6 C24 C24 C  0 1 N N N 13.388 36.048 57.918 -6.804 0.801  0.712  C24 0V6 24 
0V6 C25 C25 C  0 1 N N N 12.611 36.662 59.010 -8.006 1.564  1.084  C25 0V6 25 
0V6 H1  H1  H  0 1 N N N 18.860 32.480 53.649 -1.451 1.933  0.075  H1  0V6 26 
0V6 H2  H2  H  0 1 N N N 23.658 33.776 57.606 4.506  -0.576 -1.708 H2  0V6 27 
0V6 H3  H3  H  0 1 N N N 22.838 32.707 56.419 2.864  -1.160 -2.064 H3  0V6 28 
0V6 H4  H4  H  0 1 N N N 21.982 36.570 57.667 4.050  1.936  0.400  H4  0V6 29 
0V6 H5  H5  H  0 1 N N N 23.868 35.806 56.226 2.817  2.648  -1.740 H5  0V6 30 
0V6 H6  H6  H  0 1 N N N 23.292 34.887 54.794 4.293  1.753  -2.176 H6  0V6 31 
0V6 H7  H7  H  0 1 N N N 22.475 36.415 55.270 2.743  1.346  -2.951 H7  0V6 32 
0V6 H11 H11 H  0 1 N N N 16.681 35.362 56.807 -3.325 1.131  0.211  H11 0V6 33 
0V6 H12 H12 H  0 1 N N N 12.992 34.189 54.980 -5.721 -2.406 -0.194 H12 0V6 34 
0V6 H13 H13 H  0 1 N N N 16.657 33.007 53.210 -1.647 -2.651 -0.930 H13 0V6 35 
0V6 H14 H14 H  0 1 N N N 20.687 36.985 59.465 3.247  1.623  2.781  H14 0V6 36 
0V6 H15 H15 H  0 1 N N N 19.614 34.055 60.700 4.762  -2.223 2.501  H15 0V6 37 
0V6 H16 H16 H  0 1 N N N 19.444 32.523 59.778 3.200  -1.663 3.146  H16 0V6 38 
0V6 H17 H17 H  0 1 N N N 20.803 32.729 60.934 3.254  -3.024 2.000  H17 0V6 39 
0V6 H18 H18 H  0 1 N N N 12.657 37.758 58.923 -8.873 0.902  1.077  H18 0V6 40 
0V6 H19 H19 H  0 1 N N N 11.563 36.333 58.944 -7.877 1.982  2.082  H19 0V6 41 
0V6 H20 H20 H  0 1 N N N 13.032 36.353 59.978 -8.160 2.371  0.368  H20 0V6 42 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0V6 C2  S1  SING Y N 1  
0V6 C2  C11 SING N N 2  
0V6 C3  C2  DOUB Y N 3  
0V6 C4  C3  SING Y N 4  
0V6 C4  C5  DOUB Y N 5  
0V6 C4  H1  SING N N 6  
0V6 C5  S1  SING Y N 7  
0V6 C6  C7  SING N N 8  
0V6 C6  H2  SING N N 9  
0V6 C6  H3  SING N N 10 
0V6 C7  O21 DOUB N N 11 
0V6 C7  N8  SING N N 12 
0V6 N8  C22 SING N N 13 
0V6 C9  N8  SING N N 14 
0V6 C9  N20 DOUB N N 15 
0V6 N10 C9  SING N N 16 
0V6 N10 H4  SING N N 17 
0V6 C11 C6  SING N N 18 
0V6 C11 N10 SING N N 19 
0V6 C12 C11 SING N N 20 
0V6 C12 H5  SING N N 21 
0V6 C12 H6  SING N N 22 
0V6 C12 H7  SING N N 23 
0V6 CL  C3  SING N N 24 
0V6 C14 C5  SING N N 25 
0V6 C14 C15 DOUB Y N 26 
0V6 C15 C16 SING Y N 27 
0V6 C15 H11 SING N N 28 
0V6 C16 C23 SING N N 29 
0V6 C17 C16 DOUB Y N 30 
0V6 C17 H12 SING N N 31 
0V6 N18 C19 DOUB Y N 32 
0V6 N18 C17 SING Y N 33 
0V6 C19 C14 SING Y N 34 
0V6 C19 H13 SING N N 35 
0V6 N20 H14 SING N N 36 
0V6 C22 H15 SING N N 37 
0V6 C22 H16 SING N N 38 
0V6 C22 H17 SING N N 39 
0V6 C23 C24 TRIP N N 40 
0V6 C24 C25 SING N N 41 
0V6 C25 H18 SING N N 42 
0V6 C25 H19 SING N N 43 
0V6 C25 H20 SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0V6 SMILES           ACDLabs              12.01 "O=C3N(C(=[N@H])NC(c1sc(cc1Cl)c2cc(C#CC)cnc2)(C)C3)C"                                                                                          
0V6 InChI            InChI                1.03  "InChI=1S/C18H17ClN4OS/c1-4-5-11-6-12(10-21-9-11)14-7-13(19)16(25-14)18(2)8-15(24)23(3)17(20)22-18/h6-7,9-10H,8H2,1-3H3,(H2,20,22)/t18-/m0/s1" 
0V6 InChIKey         InChI                1.03  IJYPXSRDUPWKPB-SFHVURJKSA-N                                                                                                                    
0V6 SMILES_CANONICAL CACTVS               3.370 "CC#Cc1cncc(c1)c2sc(c(Cl)c2)[C@]3(C)CC(=O)N(C)C(=N)N3"                                                                                         
0V6 SMILES           CACTVS               3.370 "CC#Cc1cncc(c1)c2sc(c(Cl)c2)[C]3(C)CC(=O)N(C)C(=N)N3"                                                                                          
0V6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C\1/NC(CC(=O)N1C)(C)c2c(cc(s2)c3cc(cnc3)C#CC)Cl"                                                                                        
0V6 SMILES           "OpenEye OEToolkits" 1.7.6 "CC#Cc1cc(cnc1)c2cc(c(s2)C3(CC(=O)N(C(=N)N3)C)C)Cl"                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0V6 "SYSTEMATIC NAME" ACDLabs              12.01 "(2Z,6S)-6-{3-chloro-5-[5-(prop-1-yn-1-yl)pyridin-3-yl]thiophen-2-yl}-2-imino-3,6-dimethyltetrahydropyrimidin-4(1H)-one" 
0V6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-azanylidene-6-[3-chloranyl-5-(5-prop-1-ynylpyridin-3-yl)thiophen-2-yl]-3,6-dimethyl-1,3-diazinan-4-one"               
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0V6 "Create component"   2012-06-29 RCSB 
0V6 "Other modification" 2012-11-15 RCSB 
# 
