data_0G6
# 
_chem_comp.id                                    0G6 
_chem_comp.name                                  "D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H34 Cl N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         PPACK 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2008-09-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        453.986 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0G6 
_chem_comp.pdbx_model_coordinates_details        "not provided" 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1FXY 
_chem_comp.pdbx_subcomponent_list                "DPN PRO AR7 0QE" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0G6 N    N    N  0 1 N N N N N N 20.518 11.878 12.614 3.674  -1.120 -1.915 N    DPN 1  
0G6 CA   CA   C  0 1 N N R N N N 21.054 11.229 13.842 3.547  -0.662 -0.525 CA   DPN 2  
0G6 C    C    C  0 1 N N N N N N 20.069 10.210 14.390 2.099  -0.706 -0.111 C    DPN 3  
0G6 O    O    O  0 1 N N N N N N 19.548 9.376  13.649 1.314  -1.398 -0.725 O    DPN 4  
0G6 CB   CB   C  0 1 N N N N N N 22.373 10.521 13.531 4.366  -1.576 0.390  CB   DPN 5  
0G6 CG   CG   C  0 1 Y N N N N N 23.535 11.449 13.361 5.830  -1.438 0.056  CG   DPN 6  
0G6 CD1  CD1  C  0 1 Y N N N N N 23.903 12.316 14.382 6.599  -0.488 0.701  CD1  DPN 7  
0G6 CD2  CD2  C  0 1 Y N N N N N 24.270 11.452 12.179 6.403  -2.266 -0.890 CD2  DPN 8  
0G6 CE1  CE1  C  0 1 Y N N N N N 24.987 13.172 14.229 7.941  -0.362 0.396  CE1  DPN 9  
0G6 CE2  CE2  C  0 1 Y N N N N N 25.356 12.304 12.016 7.746  -2.140 -1.196 CE2  DPN 10 
0G6 CZ   CZ   C  0 1 Y N N N N N 25.714 13.165 13.043 8.514  -1.186 -0.555 CZ   DPN 11 
0G6 N1   N1   N  0 1 N N N N N N 19.778 10.281 15.696 1.676  0.023  0.941  N    PRO 12 
0G6 CA1  CA1  C  0 1 N N S N N N 18.847 9.328  16.304 0.297  0.073  1.449  CA   PRO 13 
0G6 C1   C1   C  0 1 N N N N N N 17.414 9.453  15.787 -0.630 0.567  0.369  C    PRO 14 
0G6 O1   O1   O  0 1 N N N N N N 16.916 10.551 15.528 -0.190 0.852  -0.725 O    PRO 15 
0G6 CB1  CB1  C  0 1 N N N N N N 18.948 9.632  17.798 0.284  1.054  2.641  CB   PRO 16 
0G6 CG1  CG1  C  0 1 N N N N N N 19.328 11.074 17.849 1.536  1.933  2.381  CG   PRO 17 
0G6 CD   CD   C  0 1 N N N N N N 20.254 11.279 16.671 2.520  0.897  1.775  CD   PRO 18 
0G6 N2   N2   N  0 1 N N N N N N 16.752 8.307  15.661 -1.949 0.692  0.618  N    AR7 19 
0G6 CA2  CA2  C  0 1 N N S N N N 15.380 8.254  15.186 -2.851 1.171  -0.432 CA   AR7 20 
0G6 C2   C2   C  0 1 N N S N N N 14.428 7.868  16.387 -2.857 2.701  -0.440 C    AR7 21 
0G6 O2   O2   O  0 1 N N N N N N 13.100 8.197  15.985 -3.736 3.170  -1.464 O    AR7 22 
0G6 CB2  CB2  C  0 1 N N N N N N 15.288 7.248  14.038 -4.266 0.657  -0.163 CB   AR7 23 
0G6 CG2  CG2  C  0 1 N N N N N N 16.004 7.709  12.786 -4.286 -0.868 -0.279 CG   AR7 24 
0G6 CD3  CD3  C  0 1 N N N N N N 16.131 6.600  11.759 -5.701 -1.382 -0.010 CD   AR7 25 
0G6 NE   NE   N  0 1 N N N N N N 16.808 7.063  10.547 -5.720 -2.843 -0.121 NE   AR7 26 
0G6 CZ1  CZ1  C  0 1 N N N N N N 17.047 6.303  9.480  -6.885 -3.530 0.080  CZ   AR7 27 
0G6 NH1  NH1  N  0 1 N N N N N N 16.667 5.031  9.456  -8.004 -2.870 0.376  NH1  AR7 28 
0G6 NH2  NH2  N  1 1 N N N N N N 17.675 6.818  8.433  -6.902 -4.858 -0.021 NH2  AR7 29 
0G6 C3   C3   C  0 1 N N N N N N 14.725 8.566  17.783 -1.441 3.216  -0.709 C1   0QE 30 
0G6 CL   CL   CL 0 0 N Y N N N N 15.741 7.944  18.694 -1.418 5.013  -0.572 CL   0QE 31 
0G6 H    H    H  0 1 N N N N N N 21.181 12.543 12.271 4.626  -1.039 -2.237 H    DPN 32 
0G6 H2   H2   H  0 1 N N N N N N 20.352 11.183 11.915 3.337  -2.066 -2.016 H2   DPN 33 
0G6 HA   HA   H  0 1 N N N N N N 21.236 11.996 14.609 3.917  0.360  -0.443 HA   DPN 34 
0G6 HB2  HB2  H  0 1 N N N N N N 22.599 9.831  14.358 4.202  -1.291 1.429  HB2  DPN 35 
0G6 HB3  HB3  H  0 1 N N N N N N 22.248 9.949  12.600 4.056  -2.610 0.243  HB3  DPN 36 
0G6 HD1  HD1  H  0 1 N N N N N N 23.341 12.325 15.304 6.152  0.156  1.444  HD1  DPN 37 
0G6 HD2  HD2  H  0 1 N N N N N N 23.993 10.783 11.378 5.803  -3.011 -1.391 HD2  DPN 38 
0G6 HE1  HE1  H  0 1 N N N N N N 25.265 13.842 15.030 8.542  0.380  0.899  HE1  DPN 39 
0G6 HE2  HE2  H  0 1 N N N N N N 25.918 12.296 11.094 8.194  -2.787 -1.936 HE2  DPN 40 
0G6 HZ   HZ   H  0 1 N N N N N N 26.557 13.830 12.922 9.563  -1.088 -0.794 HZ   DPN 41 
0G6 HA1  HA1  H  0 1 N N N N N N 19.200 8.301  16.126 -0.013 -0.918 1.779  HA   PRO 42 
0G6 HB21 HB21 H  0 0 N N N N N N 17.982 9.464  18.297 -0.622 1.661  2.631  HB2  PRO 43 
0G6 HB31 HB31 H  0 0 N N N N N N 19.719 9.008  18.273 0.379  0.516  3.584  HB3  PRO 44 
0G6 HG2  HG2  H  0 1 N N N N N N 18.437 11.712 17.755 1.314  2.729  1.671  HG2  PRO 45 
0G6 HG3  HG3  H  0 1 N N N N N N 19.846 11.304 18.792 1.927  2.341  3.313  HG3  PRO 46 
0G6 HD21 HD21 H  0 0 N N N N N N 21.300 11.088 16.953 3.000  0.320  2.564  HD2  PRO 47 
0G6 HD3  HD3  H  0 1 N N N N N N 20.162 12.299 16.269 3.268  1.400  1.162  HD3  PRO 48 
0G6 H1   H1   H  0 1 N N N N N N 17.214 7.453  15.901 -2.301 0.464  1.493  H    AR7 49 
0G6 HA2  HA2  H  0 1 N N N N N N 15.077 9.244  14.814 -2.509 0.805  -1.400 HA   AR7 50 
0G6 HB22 HB22 H  0 0 N N N N N N 15.735 6.299  14.368 -4.574 0.949  0.841  HB2  AR7 51 
0G6 HB32 HB32 H  0 0 N N N N N N 14.227 7.089  13.796 -4.953 1.086  -0.893 HB3  AR7 52 
0G6 HG21 HG21 H  0 0 N N N N N N 15.439 8.541  12.341 -3.978 -1.160 -1.283 HG2  AR7 53 
0G6 HG31 HG31 H  0 0 N N N N N N 17.011 8.055  13.061 -3.599 -1.297 0.451  HG3  AR7 54 
0G6 HD22 HD22 H  0 0 N N N N N N 16.709 5.773  12.197 -6.009 -1.090 0.994  HD2  AR7 55 
0G6 HD31 HD31 H  0 0 N N N N N N 15.125 6.244  11.492 -6.388 -0.954 -0.740 HD3  AR7 56 
0G6 HE   HE   H  0 1 N N N N N N 17.112 8.015  10.518 -4.905 -3.323 -0.337 HE   AR7 57 
0G6 HH11 HH11 H  0 0 N N N N N N 16.855 4.468  8.651  -7.992 -1.903 0.450  HH11 AR7 58 
0G6 HH12 HH12 H  0 0 N N N N N N 16.193 4.636  10.243 -8.831 -3.357 0.519  HH12 AR7 59 
0G6 HH21 HH21 H  0 0 N N N N N N 17.860 6.249  7.631  -6.088 -5.338 -0.237 HH21 AR7 60 
0G6 HH22 HH22 H  0 0 N N N N N N 17.964 7.775  8.444  -7.729 -5.345 0.121  HH22 AR7 61 
0G6 H11  H11  H  0 1 N N N N N N 15.066 9.590  17.568 -0.754 2.787  0.021  H    0QE 62 
0G6 H21  H21  H  0 1 N N N N N N 13.774 8.604  18.335 -1.133 2.924  -1.713 HA   0QE 63 
0G6 H33  H33  H  0 1 N N N N N N 14.508 6.781  16.538 -3.198 3.068  0.528  H33  AR7 64 
0G6 H34  H34  H  0 1 N N N N N N 12.494 7.979  16.683 -4.653 2.881  -1.357 H34  AR7 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0G6 N   CA   SING N N 1  
0G6 N   H    SING N N 2  
0G6 N   H2   SING N N 3  
0G6 CA  C    SING N N 4  
0G6 CA  CB   SING N N 5  
0G6 CA  HA   SING N N 6  
0G6 C   O    DOUB N N 7  
0G6 C   N1   SING N N 8  
0G6 CB  CG   SING N N 9  
0G6 CB  HB2  SING N N 10 
0G6 CB  HB3  SING N N 11 
0G6 CG  CD1  DOUB Y N 12 
0G6 CG  CD2  SING Y N 13 
0G6 CD1 CE1  SING Y N 14 
0G6 CD1 HD1  SING N N 15 
0G6 CD2 CE2  DOUB Y N 16 
0G6 CD2 HD2  SING N N 17 
0G6 CE1 CZ   DOUB Y N 18 
0G6 CE1 HE1  SING N N 19 
0G6 CE2 CZ   SING Y N 20 
0G6 CE2 HE2  SING N N 21 
0G6 CZ  HZ   SING N N 22 
0G6 N1  CA1  SING N N 23 
0G6 N1  CD   SING N N 24 
0G6 CA1 C1   SING N N 25 
0G6 CA1 CB1  SING N N 26 
0G6 CA1 HA1  SING N N 27 
0G6 C1  O1   DOUB N N 28 
0G6 C1  N2   SING N N 29 
0G6 CB1 CG1  SING N N 30 
0G6 CB1 HB21 SING N N 31 
0G6 CB1 HB31 SING N N 32 
0G6 CG1 CD   SING N N 33 
0G6 CG1 HG2  SING N N 34 
0G6 CG1 HG3  SING N N 35 
0G6 CD  HD21 SING N N 36 
0G6 CD  HD3  SING N N 37 
0G6 N2  CA2  SING N N 38 
0G6 N2  H1   SING N N 39 
0G6 CA2 C2   SING N N 40 
0G6 CA2 CB2  SING N N 41 
0G6 CA2 HA2  SING N N 42 
0G6 C2  O2   SING N N 43 
0G6 C2  C3   SING N N 44 
0G6 CB2 CG2  SING N N 45 
0G6 CB2 HB22 SING N N 46 
0G6 CB2 HB32 SING N N 47 
0G6 CG2 CD3  SING N N 48 
0G6 CG2 HG21 SING N N 49 
0G6 CG2 HG31 SING N N 50 
0G6 CD3 NE   SING N N 51 
0G6 CD3 HD22 SING N N 52 
0G6 CD3 HD31 SING N N 53 
0G6 NE  CZ1  SING N N 54 
0G6 NE  HE   SING N N 55 
0G6 CZ1 NH1  SING N N 56 
0G6 CZ1 NH2  DOUB N N 57 
0G6 NH1 HH11 SING N N 58 
0G6 NH1 HH12 SING N N 59 
0G6 NH2 HH21 SING N N 60 
0G6 NH2 HH22 SING N N 61 
0G6 C3  H11  SING N N 62 
0G6 C3  H21  SING N N 63 
0G6 CL  C3   SING N N 64 
0G6 C2  H33  SING N N 65 
0G6 O2  H34  SING N N 66 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0G6 SMILES           ACDLabs              12.01 "O=C(NC(CCCNC(=[NH2+])\N)C(O)CCl)C2N(C(=O)C(N)Cc1ccccc1)CCC2"                                                                                                                                         
0G6 InChI            InChI                1.03  "InChI=1S/C21H33ClN6O3/c22-13-18(29)16(8-4-10-26-21(24)25)27-19(30)17-9-5-11-28(17)20(31)15(23)12-14-6-2-1-3-7-14/h1-3,6-7,15-18,29H,4-5,8-13,23H2,(H,27,30)(H4,24,25,26)/p+1/t15-,16+,17+,18-/m1/s1" 
0G6 InChIKey         InChI                1.03  DVFLYEYCMMLBTQ-VSZNYVQBSA-O                                                                                                                                                                           
0G6 SMILES_CANONICAL CACTVS               3.370 "N[C@H](Cc1ccccc1)C(=O)N2CCC[C@H]2C(=O)N[C@@H](CCCNC(N)=[NH2+])[C@H](O)CCl"                                                                                                                           
0G6 SMILES           CACTVS               3.370 "N[CH](Cc1ccccc1)C(=O)N2CCC[CH]2C(=O)N[CH](CCCNC(N)=[NH2+])[CH](O)CCl"                                                                                                                                
0G6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C[C@H](C(=O)N2CCC[C@H]2C(=O)N[C@@H](CCCNC(=[NH2+])N)[C@@H](CCl)O)N"                                                                                                                        
0G6 SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CC(C(=O)N2CCCC2C(=O)NC(CCCNC(=[NH2+])N)C(CCl)O)N"                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0G6 "SYSTEMATIC NAME" ACDLabs              12.01 "D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide"                                                 
0G6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[azanyl-[[(4S,5S)-4-[[(2S)-1-[(2R)-2-azanyl-3-phenyl-propanoyl]pyrrolidin-2-yl]carbonylamino]-6-chloranyl-5-oxidanyl-hexyl]amino]methylidene]azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0G6 "Create component"   2008-09-14 RCSB 
0G6 "Other modification" 2010-10-10 RCSB 
0G6 "Modify synonyms"    2011-02-04 RCSB 
0G6 "Modify descriptor"  2011-06-04 RCSB 
0G6 "Modify synonyms"    2021-03-01 PDBE 
0G6 "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      0G6 
_pdbx_chem_comp_synonyms.name         PPACK 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 0G6 HIS None "Covalent chemical modification" "Amino-acid side chain" "Any position" C3 CE1 ? ? 
2 0G6 HIS None "Covalent chemical modification" "Amino-acid side chain" "Any position" C3 NE2 ? ? 
3 0G6 SER None "Covalent chemical modification" "Amino-acid side chain" "Any position" C2 OG  ? ? 
4 0G6 THR None "Covalent chemical modification" "Amino-acid side chain" "Any position" C2 OG1 ? ? 
# 
