data_X05
#

_chem_comp.id                                   X05
_chem_comp.name                                 AMINO-CASTANOSPERMINE
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C8 H16 N2 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(1S,6S,7R,8R,8AR)-6-AMINOOCTAHYDROINDOLIZINE-1,7,8-TRIOL"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-12-05
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       188.224
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    X05
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2X05
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
X05  OAD   OAD   O  0  1  N  N  N  5.237  38.897  116.944   0.101   2.365   0.617  OAD   X05   1  
X05  CAK   CAK   C  0  1  N  N  R  6.041  40.091  116.786   0.249   1.101  -0.034  CAK   X05   2  
X05  CAL   CAL   C  0  1  N  N  R  6.284  40.711  118.164  -0.760   0.109   0.529  CAL   X05   3  
X05  CAI   CAI   C  0  1  N  N  S  7.096  39.793  119.063  -2.220   0.500   0.280  CAI   X05   4  
X05  OAB   OAB   O  0  1  N  N  N  8.185  39.247  118.310  -2.326   1.330  -0.878  OAB   X05   5  
X05  CAE   CAE   C  0  1  N  N  N  7.662  40.782  120.076  -2.941  -0.852   0.046  CAE   X05   6  
X05  CAF   CAF   C  0  1  N  N  N  7.577  42.151  119.390  -1.817  -1.921   0.115  CAF   X05   7  
X05  NAM   NAM   N  0  1  N  N  N  7.227  41.826  117.995  -0.602  -1.164  -0.222  NAM   X05   8  
X05  CAG   CAG   C  0  1  N  N  N  6.716  42.973  117.197   0.669  -1.781   0.136  CAG   X05   9  
X05  CAH   CAH   C  0  1  N  N  S  6.212  42.501  115.823   1.794  -0.862  -0.363  CAH   X05  10  
X05  NAA   NAA   N  0  1  N  N  N  5.390  43.567  115.228   3.091  -1.428   0.031  NAA   X05  11  
X05  CAJ   CAJ   C  0  1  N  N  R  5.395  41.159  115.872   1.653   0.538   0.234  CAJ   X05  12  
X05  OAC   OAC   O  0  1  N  N  N  5.181  40.610  114.544   2.628   1.401  -0.354  OAC   X05  13  
X05  HAD   HAD   H  0  1  N  N  N  5.061  38.518  116.091   0.716   3.043   0.303  HAD   X05  14  
X05  HAK   HAK   H  0  1  N  N  N  6.979  39.779  116.304   0.094   1.217  -1.107  HAK   X05  15  
X05  HAL   HAL   H  0  1  N  N  N  5.294  40.955  118.577  -0.585  -0.043   1.594  HAL   X05  16  
X05  HAJ   HAJ   H  0  1  N  N  N  4.421  41.423  116.309   1.821   0.488   1.310  HAJ   X05  17  
X05  HAI   HAI   H  0  1  N  N  N  6.524  38.959  119.496  -2.633   1.008   1.152  HAI   X05  18  
X05  HAB   HAB   H  0  1  N  N  N  7.917  39.126  117.407  -3.230   1.607  -1.082  HAB   X05  19  
X05  HAE1  HAE1  H  0  0  N  N  N  7.075  40.771  121.006  -3.680  -1.029   0.827  HAE1  X05  20  
X05  HAE2  HAE2  H  0  0  N  N  N  8.694  40.530  120.362  -3.415  -0.864  -0.935  HAE2  X05  21  
X05  HAF1  HAF1  H  0  0  N  N  N  6.811  42.787  119.858  -1.744  -2.336   1.120  HAF1  X05  22  
X05  HAF2  HAF2  H  0  0  N  N  N  8.514  42.722  119.468  -1.993  -2.710  -0.615  HAF2  X05  23  
X05  HAG1  HAG1  H  0  0  N  N  N  5.885  43.446  117.741   0.734  -1.890   1.218  HAG1  X05  24  
X05  HAG2  HAG2  H  0  0  N  N  N  7.536  43.691  117.045   0.752  -2.758  -0.340  HAG2  X05  25  
X05  HAH   HAH   H  0  1  N  N  N  7.099  42.291  115.208   1.747  -0.794  -1.450  HAH   X05  26  
X05  HAA1  HAA1  H  0  0  N  N  N  5.204  44.268  115.916   3.221  -2.346  -0.366  HAA1  X05  27  
X05  HAA2  HAA2  H  0  0  N  N  N  5.881  43.977  114.459   3.848  -0.812  -0.227  HAA2  X05  28  
X05  HAC   HAC   H  0  1  N  N  N  5.134  41.318  113.912   3.541   1.109  -0.226  HAC   X05  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
X05  OAD  CAK   SING  N  N   1  
X05  CAK  CAL   SING  N  N   2  
X05  CAK  CAJ   SING  N  N   3  
X05  CAL  CAI   SING  N  N   4  
X05  CAL  NAM   SING  N  N   5  
X05  CAI  OAB   SING  N  N   6  
X05  CAI  CAE   SING  N  N   7  
X05  CAE  CAF   SING  N  N   8  
X05  CAF  NAM   SING  N  N   9  
X05  NAM  CAG   SING  N  N  10  
X05  CAG  CAH   SING  N  N  11  
X05  CAH  NAA   SING  N  N  12  
X05  CAH  CAJ   SING  N  N  13  
X05  CAJ  OAC   SING  N  N  14  
X05  OAD  HAD   SING  N  N  15  
X05  CAK  HAK   SING  N  N  16  
X05  CAL  HAL   SING  N  N  17  
X05  CAJ  HAJ   SING  N  N  18  
X05  CAI  HAI   SING  N  N  19  
X05  OAB  HAB   SING  N  N  20  
X05  CAE  HAE1  SING  N  N  21  
X05  CAE  HAE2  SING  N  N  22  
X05  CAF  HAF1  SING  N  N  23  
X05  CAF  HAF2  SING  N  N  24  
X05  CAG  HAG1  SING  N  N  25  
X05  CAG  HAG2  SING  N  N  26  
X05  CAH  HAH   SING  N  N  27  
X05  NAA  HAA1  SING  N  N  28  
X05  NAA  HAA2  SING  N  N  29  
X05  OAC  HAC   SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
X05  SMILES            ACDLabs               10.04  "OC1CCN2C1C(O)C(O)C(N)C2"  
X05  SMILES_CANONICAL  CACTVS                3.352  "N[C@H]1CN2CC[C@H](O)[C@@H]2[C@@H](O)[C@@H]1O"  
X05  SMILES            CACTVS                3.352  "N[CH]1CN2CC[CH](O)[CH]2[CH](O)[CH]1O"  
X05  SMILES_CANONICAL  "OpenEye OEToolkits"  1.6.1  "C1C[N@@]2C[C@@H]([C@H]([C@@H]([C@H]2[C@H]1O)O)O)N"  
X05  SMILES            "OpenEye OEToolkits"  1.6.1  "C1CN2CC(C(C(C2C1O)O)O)N"  
X05  InChI             InChI                 1.03   "InChI=1S/C8H16N2O3/c9-4-3-10-2-1-5(11)6(10)8(13)7(4)12/h4-8,11-13H,1-3,9H2/t4-,5-,6+,7+,8+/m0/s1"  
X05  InChIKey          InChI                 1.03   LKBIVYWSUHFIBP-TVNFTVLESA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
X05  "SYSTEMATIC NAME"  ACDLabs               10.04  "(1S,6S,7R,8R,8aR)-6-aminooctahydroindolizine-1,7,8-triol"  
X05  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "(1S,4R,6S,7R,8R,8aR)-6-amino-1,2,3,5,6,7,8,8a-octahydroindolizine-1,7,8-triol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
X05  "Create component"   2009-12-05  EBI   
X05  "Modify descriptor"  2011-06-04  RCSB  
X05  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     X05
_pdbx_chem_comp_synonyms.name        "(1S,6S,7R,8R,8AR)-6-AMINOOCTAHYDROINDOLIZINE-1,7,8-TRIOL"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
