data_WV5
# 
_chem_comp.id                                    WV5 
_chem_comp.name                                  "(2R,3R,4R,5S)-1-[8-(furan-2-yl)octyl]-2-(hydroxymethyl)piperidine-3,4,5-triol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H31 N O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-10-20 
_chem_comp.pdbx_modified_date                    2023-02-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        341.442 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WV5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8EUT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WV5 N1  N1  N 0 1 N N N -35.550 -30.457 -68.752 3.412   0.206  0.061  N1  WV5 1  
WV5 C4  C1  C 0 1 N N N -33.776 -28.812 -68.091 4.263   2.484  0.345  C4  WV5 2  
WV5 C5  C2  C 0 1 N N N -36.449 -29.833 -68.227 2.116   0.678  0.567  C5  WV5 3  
WV5 C6  C3  C 0 1 N N N -36.591 -30.085 -66.722 0.987   -0.050 -0.164 C6  WV5 4  
WV5 C7  C4  C 0 1 N N N -37.771 -29.424 -66.055 -0.363  0.442  0.363  C7  WV5 5  
WV5 C8  C5  C 0 1 N N N -37.583 -29.246 -64.549 -1.492  -0.286 -0.369 C8  WV5 6  
WV5 C10 C6  C 0 1 N N N -39.685 -28.556 -63.225 -3.971  -0.521 -0.573 C10 WV5 7  
WV5 C13 C7  C 0 1 Y N N -43.037 -28.238 -65.310 -7.779  -0.272 -0.258 C13 WV5 8  
WV5 C15 C8  C 0 1 Y N N -44.095 -29.129 -67.075 -9.660  0.862  0.031  C15 WV5 9  
WV5 C17 C9  C 0 1 N N N -35.844 -31.884 -68.813 3.595   -1.225 0.338  C17 WV5 10 
WV5 C1  C10 C 0 1 N N R -33.444 -32.332 -69.365 6.069   -0.914 0.218  C1  WV5 11 
WV5 O1  O1  O 0 1 N N N -32.533 -32.857 -70.430 7.269   -1.327 -0.441 O1  WV5 12 
WV5 C2  C11 C 0 1 N N R -33.112 -30.946 -69.065 5.831   0.576  -0.040 C2  WV5 13 
WV5 O2  O2  O 0 1 N N N -31.849 -31.005 -68.366 6.907   1.335  0.516  O2  WV5 14 
WV5 C3  C12 C 0 1 N N R -34.191 -30.280 -68.200 4.515   0.999  0.617  C3  WV5 15 
WV5 O3  O3  O 0 1 N N N -34.007 -28.229 -69.339 4.262   2.716  -1.065 O3  WV5 16 
WV5 O4  O4  O 0 1 Y N N -43.540 -27.246 -66.014 -8.460  -0.801 0.772  O4  WV5 17 
WV5 O5  O5  O 0 1 N N N -35.025 -33.868 -70.106 5.071   -3.101 -0.042 O5  WV5 18 
WV5 C9  C13 C 0 1 N N N -38.800 -29.695 -63.748 -2.841  0.207  0.159  C9  WV5 19 
WV5 C11 C14 C 0 1 N N N -40.677 -28.074 -64.303 -5.320  -0.029 -0.046 C11 WV5 20 
WV5 C12 C15 C 0 1 N N N -42.207 -28.069 -64.016 -6.450  -0.757 -0.777 C12 WV5 21 
WV5 C14 C16 C 0 1 Y N N -43.341 -29.484 -65.914 -8.487  0.760  -0.751 C14 WV5 22 
WV5 C16 C17 C 0 1 Y N N -44.173 -27.718 -67.053 -9.601  -0.116 0.953  C16 WV5 23 
WV5 C18 C18 C 0 1 N N S -34.810 -32.469 -69.814 4.883   -1.714 -0.328 C18 WV5 24 
WV5 H2  H2  H 0 1 N N N -32.710 -28.739 -67.831 3.298   2.770  0.762  H2  WV5 25 
WV5 H3  H3  H 0 1 N N N -34.376 -28.306 -67.321 5.050   3.077  0.810  H3  WV5 26 
WV5 H4  H4  H 0 1 N N N -36.261 -28.760 -68.381 2.048   0.475  1.636  H4  WV5 27 
WV5 H5  H5  H 0 1 N N N -37.394 -30.113 -68.715 2.029   1.751  0.395  H5  WV5 28 
WV5 H6  H6  H 0 1 N N N -36.681 -31.171 -66.568 1.056   0.154  -1.233 H6  WV5 29 
WV5 H7  H7  H 0 1 N N N -35.677 -29.720 -66.231 1.075   -1.123 0.008  H7  WV5 30 
WV5 H8  H8  H 0 1 N N N -37.921 -28.433 -66.509 -0.431  0.239  1.431  H8  WV5 31 
WV5 H9  H9  H 0 1 N N N -38.663 -30.044 -66.226 -0.450  1.515  0.191  H9  WV5 32 
WV5 H10 H10 H 0 1 N N N -36.713 -29.839 -64.230 -1.423  -0.082 -1.437 H10 WV5 33 
WV5 H11 H11 H 0 1 N N N -37.397 -28.182 -64.341 -1.404  -1.358 -0.197 H11 WV5 34 
WV5 H12 H12 H 0 1 N N N -39.044 -27.713 -62.926 -3.902  -0.318 -1.642 H12 WV5 35 
WV5 H13 H13 H 0 1 N N N -40.251 -28.914 -62.352 -3.883  -1.594 -0.401 H13 WV5 36 
WV5 H14 H14 H 0 1 N N N -44.516 -29.797 -67.812 -10.452 1.587  -0.089 H14 WV5 37 
WV5 H15 H15 H 0 1 N N N -36.869 -32.052 -69.175 3.660   -1.381 1.414  H15 WV5 38 
WV5 H16 H16 H 0 1 N N N -35.725 -32.345 -67.822 2.747   -1.783 -0.060 H16 WV5 39 
WV5 H17 H17 H 0 1 N N N -33.302 -32.937 -68.457 6.164   -1.088 1.289  H17 WV5 40 
WV5 H18 H18 H 0 1 N N N -31.631 -32.772 -70.146 7.482   -2.262 -0.320 H18 WV5 41 
WV5 H19 H19 H 0 1 N N N -33.002 -30.376 -69.999 5.776   0.756  -1.114 H19 WV5 42 
WV5 H20 H20 H 0 1 N N N -31.571 -30.126 -68.138 7.774   1.116  0.147  H20 WV5 43 
WV5 H21 H21 H 0 1 N N N -34.152 -30.726 -67.195 4.577   0.832  1.692  H21 WV5 44 
WV5 H22 H22 H 0 1 N N N -33.760 -27.312 -69.311 4.107   3.638  -1.311 H22 WV5 45 
WV5 H23 H23 H 0 1 N N N -35.917 -33.996 -70.406 4.356   -3.669 -0.359 H23 WV5 46 
WV5 H24 H24 H 0 1 N N N -39.416 -30.338 -64.394 -2.910  0.003  1.227  H24 WV5 47 
WV5 H25 H25 H 0 1 N N N -38.445 -30.276 -62.884 -2.929  1.279  -0.014 H25 WV5 48 
WV5 H26 H26 H 0 1 N N N -40.523 -28.715 -65.184 -5.389  -0.233 1.023  H26 WV5 49 
WV5 H27 H27 H 0 1 N N N -40.398 -27.039 -64.549 -5.408  1.043  -0.218 H27 WV5 50 
WV5 H28 H28 H 0 1 N N N -42.477 -27.113 -63.543 -6.362  -1.830 -0.605 H28 WV5 51 
WV5 H29 H29 H 0 1 N N N -42.443 -28.897 -63.331 -6.381  -0.554 -1.846 H29 WV5 52 
WV5 H30 H30 H 0 1 N N N -43.067 -30.472 -65.575 -8.210  1.391  -1.582 H30 WV5 53 
WV5 H31 H31 H 0 1 N N N -44.683 -27.116 -67.791 -10.344 -0.316 1.710  H31 WV5 54 
WV5 H32 H32 H 0 1 N N N -34.920 -31.904 -70.751 4.813   -1.571 -1.406 H32 WV5 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WV5 O1  C1  SING N N 1  
WV5 O5  C18 SING N N 2  
WV5 C18 C1  SING N N 3  
WV5 C18 C17 SING N N 4  
WV5 C1  C2  SING N N 5  
WV5 O3  C4  SING N N 6  
WV5 C2  O2  SING N N 7  
WV5 C2  C3  SING N N 8  
WV5 C17 N1  SING N N 9  
WV5 N1  C5  SING N N 10 
WV5 N1  C3  SING N N 11 
WV5 C5  C6  SING N N 12 
WV5 C3  C4  SING N N 13 
WV5 C15 C16 DOUB Y N 14 
WV5 C15 C14 SING Y N 15 
WV5 C16 O4  SING Y N 16 
WV5 C6  C7  SING N N 17 
WV5 C7  C8  SING N N 18 
WV5 O4  C13 SING Y N 19 
WV5 C14 C13 DOUB Y N 20 
WV5 C13 C12 SING N N 21 
WV5 C8  C9  SING N N 22 
WV5 C11 C12 SING N N 23 
WV5 C11 C10 SING N N 24 
WV5 C9  C10 SING N N 25 
WV5 C4  H2  SING N N 26 
WV5 C4  H3  SING N N 27 
WV5 C5  H4  SING N N 28 
WV5 C5  H5  SING N N 29 
WV5 C6  H6  SING N N 30 
WV5 C6  H7  SING N N 31 
WV5 C7  H8  SING N N 32 
WV5 C7  H9  SING N N 33 
WV5 C8  H10 SING N N 34 
WV5 C8  H11 SING N N 35 
WV5 C10 H12 SING N N 36 
WV5 C10 H13 SING N N 37 
WV5 C15 H14 SING N N 38 
WV5 C17 H15 SING N N 39 
WV5 C17 H16 SING N N 40 
WV5 C1  H17 SING N N 41 
WV5 O1  H18 SING N N 42 
WV5 C2  H19 SING N N 43 
WV5 O2  H20 SING N N 44 
WV5 C3  H21 SING N N 45 
WV5 O3  H22 SING N N 46 
WV5 O5  H23 SING N N 47 
WV5 C9  H24 SING N N 48 
WV5 C9  H25 SING N N 49 
WV5 C11 H26 SING N N 50 
WV5 C11 H27 SING N N 51 
WV5 C12 H28 SING N N 52 
WV5 C12 H29 SING N N 53 
WV5 C14 H30 SING N N 54 
WV5 C16 H31 SING N N 55 
WV5 C18 H32 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WV5 SMILES           ACDLabs              12.01 "OCC1C(O)C(O)C(O)CN1CCCCCCCCc1ccco1"                                                                                                                    
WV5 InChI            InChI                1.06  "InChI=1S/C18H31NO5/c20-13-15-17(22)18(23)16(21)12-19(15)10-6-4-2-1-3-5-8-14-9-7-11-24-14/h7,9,11,15-18,20-23H,1-6,8,10,12-13H2/t15-,16+,17-,18-/m1/s1" 
WV5 InChIKey         InChI                1.06  SVEHLYNGWWEMLW-XMTFNYHQSA-N                                                                                                                             
WV5 SMILES_CANONICAL CACTVS               3.385 "OC[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)CN1CCCCCCCCc2occc2"                                                                                                 
WV5 SMILES           CACTVS               3.385 "OC[CH]1[CH](O)[CH](O)[CH](O)CN1CCCCCCCCc2occc2"                                                                                                        
WV5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(oc1)CCCCCCCCN2C[C@@H]([C@H]([C@@H]([C@H]2CO)O)O)O"                                                                                                
WV5 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(oc1)CCCCCCCCN2CC(C(C(C2CO)O)O)O"                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WV5 "SYSTEMATIC NAME" ACDLabs              12.01 "(2R,3R,4R,5S)-1-[8-(furan-2-yl)octyl]-2-(hydroxymethyl)piperidine-3,4,5-triol"             
WV5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{R},5~{S})-1-[8-(furan-2-yl)octyl]-2-(hydroxymethyl)piperidine-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WV5 "Create component" 2022-10-20 RCSB 
WV5 "Initial release"  2023-02-22 RCSB 
# 
