data_VU5
# 
_chem_comp.id                                    VU5 
_chem_comp.name                                  "1-[(2S)-2-hydroxy-3-(methylamino)propyl]pyrrolidin-2-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H16 N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-09-02 
_chem_comp.pdbx_modified_date                    2022-10-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        172.225 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VU5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FMC 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VU5 N1  N1  N 0 1 N N N 8.339  1.182  -5.000 1.299  -0.335 -0.489 N1  VU5 1  
VU5 C7  C1  C 0 1 N N N 8.040  0.252  -5.958 2.057  0.734  -0.192 C7  VU5 2  
VU5 O1  O1  O 0 1 N N N 10.160 4.247  -5.332 -0.906 1.013  0.814  O1  VU5 3  
VU5 C1  C2  C 0 1 N N N 7.893  3.823  -5.115 -2.488 -0.248 -0.507 C1  VU5 4  
VU5 C5  C3  C 0 1 N N N 6.441  0.039  -4.179 3.144  -1.189 0.782  C5  VU5 5  
VU5 C6  C4  C 0 1 N N N 6.897  -0.594 -5.486 3.381  0.287  0.388  C6  VU5 6  
VU5 C4  C5  C 0 1 N N N 7.324  1.277  -3.955 1.994  -1.587 -0.169 C4  VU5 7  
VU5 C3  C6  C 0 1 N N N 9.548  1.950  -5.038 -0.051 -0.260 -1.054 C3  VU5 8  
VU5 C2  C7  C 0 1 N N S 9.316  3.419  -4.664 -1.076 -0.201 0.079  C2  VU5 9  
VU5 O   O2  O 0 1 N N N 8.680  0.191  -6.987 1.729  1.889  -0.364 O   VU5 10 
VU5 N   N2  N 0 1 N N N 7.735  5.331  -5.015 -3.473 -0.192 0.581  N   VU5 11 
VU5 C   C8  C 0 1 N N N 6.818  5.822  -6.101 -4.844 -0.235 0.054  C   VU5 12 
VU5 H1  H1  H 0 1 N N N 11.057 4.045  -5.094 -1.021 1.813  0.283  H1  VU5 13 
VU5 H2  H2  H 0 1 N N N 7.151  3.333  -4.467 -2.634 0.603  -1.173 H2  VU5 14 
VU5 H3  H3  H 0 1 N N N 7.736  3.507  -6.157 -2.618 -1.174 -1.068 H3  VU5 15 
VU5 H4  H4  H 0 1 N N N 5.384  0.335  -4.250 4.033  -1.791 0.592  H4  VU5 16 
VU5 H5  H5  H 0 1 N N N 6.568  -0.672 -3.349 2.836  -1.270 1.824  H5  VU5 17 
VU5 H6  H6  H 0 1 N N N 6.081  -0.585 -6.224 4.170  0.361  -0.361 H6  VU5 18 
VU5 H7  H7  H 0 1 N N N 7.228  -1.629 -5.318 3.633  0.881  1.267  H7  VU5 19 
VU5 H8  H8  H 0 1 N N N 7.787  1.252  -2.957 1.314  -2.279 0.330  H8  VU5 20 
VU5 H9  H9  H 0 1 N N N 6.737  2.201  -4.063 2.394  -2.040 -1.076 H9  VU5 21 
VU5 H10 H10 H 0 1 N N N 10.267 1.514  -4.329 -0.137 0.636  -1.669 H10 VU5 22 
VU5 H11 H11 H 0 1 N N N 9.964  1.905  -6.055 -0.237 -1.141 -1.668 H11 VU5 23 
VU5 H12 H12 H 0 1 N N N 9.398  3.537  -3.573 -0.931 -1.052 0.745  H12 VU5 24 
VU5 H13 H13 H 0 1 N N N 8.630  5.766  -5.115 -3.332 0.626  1.155  H13 VU5 25 
VU5 H15 H15 H 0 1 N N N 6.708  6.914  -6.023 -5.005 0.616  -0.607 H15 VU5 26 
VU5 H16 H16 H 0 1 N N N 7.242  5.566  -7.083 -4.990 -1.161 -0.502 H16 VU5 27 
VU5 H17 H17 H 0 1 N N N 5.833  5.346  -5.992 -5.552 -0.192 0.881  H17 VU5 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VU5 O  C7  DOUB N N 1  
VU5 C  N   SING N N 2  
VU5 C7 C6  SING N N 3  
VU5 C7 N1  SING N N 4  
VU5 C6 C5  SING N N 5  
VU5 O1 C2  SING N N 6  
VU5 C1 N   SING N N 7  
VU5 C1 C2  SING N N 8  
VU5 C3 N1  SING N N 9  
VU5 C3 C2  SING N N 10 
VU5 N1 C4  SING N N 11 
VU5 C5 C4  SING N N 12 
VU5 O1 H1  SING N N 13 
VU5 C1 H2  SING N N 14 
VU5 C1 H3  SING N N 15 
VU5 C5 H4  SING N N 16 
VU5 C5 H5  SING N N 17 
VU5 C6 H6  SING N N 18 
VU5 C6 H7  SING N N 19 
VU5 C4 H8  SING N N 20 
VU5 C4 H9  SING N N 21 
VU5 C3 H10 SING N N 22 
VU5 C3 H11 SING N N 23 
VU5 C2 H12 SING N N 24 
VU5 N  H13 SING N N 25 
VU5 C  H15 SING N N 26 
VU5 C  H16 SING N N 27 
VU5 C  H17 SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VU5 SMILES           ACDLabs              12.01 "O=C1CCCN1CC(O)CNC"                                                              
VU5 InChI            InChI                1.06  "InChI=1S/C8H16N2O2/c1-9-5-7(11)6-10-4-2-3-8(10)12/h7,9,11H,2-6H2,1H3/t7-/m0/s1" 
VU5 InChIKey         InChI                1.06  ZMESCLLKMGZIBU-ZETCQYMHSA-N                                                      
VU5 SMILES_CANONICAL CACTVS               3.385 "CNC[C@H](O)CN1CCCC1=O"                                                          
VU5 SMILES           CACTVS               3.385 "CNC[CH](O)CN1CCCC1=O"                                                           
VU5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CNC[C@@H](CN1CCCC1=O)O"                                                         
VU5 SMILES           "OpenEye OEToolkits" 2.0.7 "CNCC(CN1CCCC1=O)O"                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VU5 "SYSTEMATIC NAME" ACDLabs              12.01 "1-[(2S)-2-hydroxy-3-(methylamino)propyl]pyrrolidin-2-one"      
VU5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(2~{S})-3-(methylamino)-2-oxidanyl-propyl]pyrrolidin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VU5 "Create component" 2022-09-02 RCSB 
VU5 "Initial release"  2022-11-02 RCSB 
# 
