data_VH5
#

_chem_comp.id                                   VH5
_chem_comp.name                                 "2-chloranyl-4-[[4-(4-methylpiperazin-1-yl)-2-oxidanylidene-1H-quinolin-6-yl]amino]pyridine-3-carbonitrile"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H19 Cl N6 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-05-18
_chem_comp.pdbx_modified_date                   2021-12-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       394.857
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    VH5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  Y
_chem_comp.pdbx_model_coordinates_db_code       7OKF
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
VH5  C1   C1   C   0  1  Y  N  N  -26.855   9.967  13.361  ?  ?  ?  C1   VH5   1  
VH5  C2   C2   C   0  1  Y  N  N  -25.890   9.838  14.377  ?  ?  ?  C2   VH5   2  
VH5  C3   C3   C   0  1  Y  N  N  -24.665   9.289  14.019  ?  ?  ?  C3   VH5   3  
VH5  C4   C4   C   0  1  Y  N  N  -24.456   8.905  12.713  ?  ?  ?  C4   VH5   4  
VH5  C5   C5   C   0  1  Y  N  N  -25.166  10.168  16.699  ?  ?  ?  C5   VH5   5  
VH5  C6   C6   C   0  1  Y  N  N  -24.855  11.346  17.358  ?  ?  ?  C6   VH5   6  
VH5  C8   C7   C   0  1  Y  N  N  -23.249  10.195  18.716  ?  ?  ?  C8   VH5   7  
VH5  C9   C8   C   0  1  Y  N  N  -23.559   8.994  18.056  ?  ?  ?  C9   VH5   8  
VH5  C12  C9   C   0  1  N  N  N  -21.933   7.906  19.458  ?  ?  ?  C12  VH5   9  
VH5  C19  C10  C   0  1  N  N  N  -28.128  10.548  13.653  ?  ?  ?  C19  VH5  10  
VH5  N5   N1   N   0  1  N  N  N  -29.140  11.005  13.842  ?  ?  ?  N5   VH5  11  
VH5  N    N2   N   0  1  Y  N  N  -25.366   9.020  11.746  ?  ?  ?  N    VH5  12  
VH5  C    C11  C   0  1  Y  N  N  -26.520   9.535  12.085  ?  ?  ?  C    VH5  13  
VH5  CL   CL1  CL  0  0  N  N  N  -27.698   9.670  10.830  ?  ?  ?  CL   VH5  14  
VH5  N1   N3   N   0  1  N  N  N  -26.128  10.251  15.679  ?  ?  ?  N1   VH5  15  
VH5  C10  C12  C   0  1  Y  N  N  -24.521   8.994  17.049  ?  ?  ?  C10  VH5  16  
VH5  C11  C13  C   0  1  N  N  N  -22.849   7.784  18.460  ?  ?  ?  C11  VH5  17  
VH5  N3   N4   N   0  1  N  N  N  -23.117   6.602  17.833  ?  ?  ?  N3   VH5  18  
VH5  C17  C14  C   0  1  N  N  N  -22.741   6.551  16.420  ?  ?  ?  C17  VH5  19  
VH5  C16  C15  C   0  1  N  N  N  -23.338   5.330  15.770  ?  ?  ?  C16  VH5  20  
VH5  N4   N5   N   0  1  N  N  N  -22.918   4.118  16.462  ?  ?  ?  N4   VH5  21  
VH5  C18  C16  C   0  1  N  N  N  -23.448   2.942  15.803  ?  ?  ?  C18  VH5  22  
VH5  C15  C17  C   0  1  N  N  N  -23.360   4.175  17.849  ?  ?  ?  C15  VH5  23  
VH5  C14  C18  C   0  1  N  N  N  -22.768   5.378  18.552  ?  ?  ?  C14  VH5  24  
VH5  C13  C19  C   0  1  N  N  N  -21.606   9.107  20.139  ?  ?  ?  C13  VH5  25  
VH5  O    O1   O   0  1  N  N  N  -20.785   9.197  21.031  ?  ?  ?  O    VH5  26  
VH5  N2   N6   N   0  1  N  N  N  -22.292  10.206  19.723  ?  ?  ?  N2   VH5  27  
VH5  C7   C20  C   0  1  Y  N  N  -23.905  11.359  18.356  ?  ?  ?  C7   VH5  28  
VH5  H1   H1   H   0  1  N  N  N  -23.886   9.165  14.756  ?  ?  ?  H1   VH5  29  
VH5  H2   H2   H   0  1  N  N  N  -23.495   8.485  12.456  ?  ?  ?  H2   VH5  30  
VH5  H3   H3   H   0  1  N  N  N  -25.361  12.261  17.088  ?  ?  ?  H3   VH5  31  
VH5  H4   H4   H   0  1  N  N  N  -21.409   7.011  19.758  ?  ?  ?  H4   VH5  32  
VH5  H5   H5   H   0  1  N  N  N  -27.028  10.626  15.903  ?  ?  ?  H5   VH5  33  
VH5  H6   H6   H   0  1  N  N  N  -24.765   8.074  16.539  ?  ?  ?  H6   VH5  34  
VH5  H7   H7   H   0  1  N  N  N  -21.645   6.509  16.336  ?  ?  ?  H7   VH5  35  
VH5  H8   H8   H   0  1  N  N  N  -23.113   7.453  15.912  ?  ?  ?  H8   VH5  36  
VH5  H9   H9   H   0  1  N  N  N  -24.435   5.403  15.804  ?  ?  ?  H9   VH5  37  
VH5  H10  H10  H   0  1  N  N  N  -23.006   5.281  14.722  ?  ?  ?  H10  VH5  38  
VH5  H12  H12  H   0  1  N  N  N  -23.119   2.040  16.341  ?  ?  ?  H12  VH5  39  
VH5  H13  H13  H   0  1  N  N  N  -24.547   2.987  15.801  ?  ?  ?  H13  VH5  40  
VH5  H14  H14  H   0  1  N  N  N  -23.080   2.905  14.767  ?  ?  ?  H14  VH5  41  
VH5  H15  H15  H   0  1  N  N  N  -24.457   4.246  17.875  ?  ?  ?  H15  VH5  42  
VH5  H16  H16  H   0  1  N  N  N  -23.039   3.260  18.368  ?  ?  ?  H16  VH5  43  
VH5  H17  H17  H   0  1  N  N  N  -21.673   5.276  18.587  ?  ?  ?  H17  VH5  44  
VH5  H18  H18  H   0  1  N  N  N  -23.165   5.432  19.577  ?  ?  ?  H18  VH5  45  
VH5  H19  H19  H   0  1  N  N  N  -22.095  11.078  20.171  ?  ?  ?  H19  VH5  46  
VH5  H20  H20  H   0  1  N  N  N  -23.671  12.284  18.861  ?  ?  ?  H20  VH5  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
VH5  CL   C    SING  N  N   1  
VH5  N    C    DOUB  Y  N   2  
VH5  N    C4   SING  Y  N   3  
VH5  C    C1   SING  Y  N   4  
VH5  C4   C3   DOUB  Y  N   5  
VH5  C1   C19  SING  N  N   6  
VH5  C1   C2   DOUB  Y  N   7  
VH5  C19  N5   TRIP  N  N   8  
VH5  C3   C2   SING  Y  N   9  
VH5  C2   N1   SING  N  N  10  
VH5  N1   C5   SING  N  N  11  
VH5  C16  C17  SING  N  N  12  
VH5  C16  N4   SING  N  N  13  
VH5  C18  N4   SING  N  N  14  
VH5  C17  N3   SING  N  N  15  
VH5  N4   C15  SING  N  N  16  
VH5  C5   C10  DOUB  Y  N  17  
VH5  C5   C6   SING  Y  N  18  
VH5  C10  C9   SING  Y  N  19  
VH5  C6   C7   DOUB  Y  N  20  
VH5  N3   C11  SING  N  N  21  
VH5  N3   C14  SING  N  N  22  
VH5  C15  C14  SING  N  N  23  
VH5  C9   C11  SING  N  N  24  
VH5  C9   C8   DOUB  Y  N  25  
VH5  C7   C8   SING  Y  N  26  
VH5  C11  C12  DOUB  N  N  27  
VH5  C8   N2   SING  N  N  28  
VH5  C12  C13  SING  N  N  29  
VH5  N2   C13  SING  N  N  30  
VH5  C13  O    DOUB  N  N  31  
VH5  C3   H1   SING  N  N  32  
VH5  C4   H2   SING  N  N  33  
VH5  C6   H3   SING  N  N  34  
VH5  C12  H4   SING  N  N  35  
VH5  N1   H5   SING  N  N  36  
VH5  C10  H6   SING  N  N  37  
VH5  C17  H7   SING  N  N  38  
VH5  C17  H8   SING  N  N  39  
VH5  C16  H9   SING  N  N  40  
VH5  C16  H10  SING  N  N  41  
VH5  C18  H12  SING  N  N  42  
VH5  C18  H13  SING  N  N  43  
VH5  C18  H14  SING  N  N  44  
VH5  C15  H15  SING  N  N  45  
VH5  C15  H16  SING  N  N  46  
VH5  C14  H17  SING  N  N  47  
VH5  C14  H18  SING  N  N  48  
VH5  N2   H19  SING  N  N  49  
VH5  C7   H20  SING  N  N  50  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
VH5  InChI             InChI                 1.03   "InChI=1S/C20H19ClN6O/c1-26-6-8-27(9-7-26)18-11-19(28)25-16-3-2-13(10-14(16)18)24-17-4-5-23-20(21)15(17)12-22/h2-5,10-11H,6-9H2,1H3,(H,23,24)(H,25,28)"  
VH5  InChIKey          InChI                 1.03   SYEISTIQVVVHKQ-UHFFFAOYSA-N  
VH5  SMILES_CANONICAL  CACTVS                3.385  "CN1CCN(CC1)C2=CC(=O)Nc3ccc(Nc4ccnc(Cl)c4C#N)cc23"  
VH5  SMILES            CACTVS                3.385  "CN1CCN(CC1)C2=CC(=O)Nc3ccc(Nc4ccnc(Cl)c4C#N)cc23"  
VH5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN1CCN(CC1)C2=CC(=O)Nc3c2cc(cc3)Nc4ccnc(c4C#N)Cl"  
VH5  SMILES            "OpenEye OEToolkits"  2.0.7  "CN1CCN(CC1)C2=CC(=O)Nc3c2cc(cc3)Nc4ccnc(c4C#N)Cl"  
#
_pdbx_chem_comp_identifier.comp_id          VH5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "2-chloranyl-4-[[4-(4-methylpiperazin-1-yl)-2-oxidanylidene-1~{H}-quinolin-6-yl]amino]pyridine-3-carbonitrile"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
VH5  "Create component"  2021-05-18  PDBE  
VH5  "Initial release"   2021-12-08  RCSB  
##
