data_UE5
#

_chem_comp.id                                   UE5
_chem_comp.name                                 "(R)-N-((1-(6-(benzylamino)pyrimidin-4-yl)-3-hydroxypiperidin-3-yl)methyl)-4-((4,4-dimethylpiperidin-1-yl)methyl)benzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C32 H42 N6 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "4-[(4,4-dimethylpiperidin-1-yl)methyl]-~{N}-[[(3~{R})-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-02-11
_chem_comp.pdbx_modified_date                   2021-10-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       542.715
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    UE5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7NHV
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
UE5  C10  C1   C  0  1  Y  N  N  45.458  -31.336  23.261   -4.016  -0.621  -2.067  C10  UE5   1  
UE5  C13  C2   C  0  1  Y  N  N  44.631  -31.691  24.308   -3.259  -1.296  -1.109  C13  UE5   2  
UE5  C17  C3   C  0  1  N  N  R  44.254  -35.817  26.501    0.949  -3.068   0.624  C17  UE5   3  
UE5  C20  C4   C  0  1  N  N  N  43.324  -37.531  24.135    2.737  -1.084   1.745  C20  UE5   4  
UE5  C21  C5   C  0  1  N  N  N  42.782  -35.963  26.101    2.471  -3.140   0.489  C21  UE5   5  
UE5  C01  C6   C  0  1  N  N  N  44.477  -24.203  22.365   -9.822   3.202  -0.518  C01  UE5   6  
UE5  C02  C7   C  0  1  N  N  N  43.180  -24.955  22.700   -8.909   3.048   0.700  C02  UE5   7  
UE5  C03  C8   C  0  1  N  N  N  42.302  -24.128  23.621   -9.040   4.281   1.596  C03  UE5   8  
UE5  C04  C9   C  0  1  N  N  N  43.529  -26.176  23.496   -7.457   2.904   0.236  C04  UE5   9  
UE5  C05  C10  C  0  1  N  N  N  43.896  -27.314  22.608   -7.320   1.637  -0.610  C05  UE5  10  
UE5  C07  C11  C  0  1  N  N  N  43.215  -28.866  21.290   -7.467  -0.779  -0.548  C07  UE5  11  
UE5  C08  C12  C  0  1  Y  N  N  43.704  -29.882  22.385   -5.983  -0.958  -0.744  C08  UE5  12  
UE5  C09  C13  C  0  1  Y  N  N  45.003  -30.438  22.293   -5.373  -0.456  -1.879  C09  UE5  13  
UE5  C11  C14  C  0  1  Y  N  N  42.880  -30.291  23.429   -5.240  -1.638   0.205  C11  UE5  14  
UE5  C12  C15  C  0  1  Y  N  N  43.340  -31.182  24.393   -3.882  -1.805   0.032  C12  UE5  15  
UE5  C14  C16  C  0  1  N  N  N  45.060  -32.708  25.369   -1.804  -1.472  -1.301  C14  UE5  16  
UE5  C16  C17  C  0  1  N  N  N  44.482  -34.395  27.114    0.366  -2.299  -0.564  C16  UE5  17  
UE5  C18  C18  C  0  1  N  N  N  45.080  -35.988  25.232    0.590  -2.345   1.925  C18  UE5  18  
UE5  C19  C19  C  0  1  N  N  N  44.823  -37.383  24.580    1.222  -0.951   1.917  C19  UE5  19  
UE5  C23  C20  C  0  1  Y  N  N  41.495  -38.157  25.714    4.392  -1.804   0.233  C23  UE5  20  
UE5  C25  C21  C  0  1  Y  N  N  40.108  -39.038  27.382    6.319  -2.990  -0.205  C25  UE5  21  
UE5  C27  C22  C  0  1  Y  N  N  40.128  -40.030  25.248    6.483  -0.695  -0.087  C27  UE5  22  
UE5  C29  C23  C  0  1  N  N  N  40.164  -41.249  23.001    6.627   1.767   0.046  C29  UE5  23  
UE5  C30  C24  C  0  1  Y  N  N  41.366  -42.216  22.819    7.671   2.847  -0.079  C30  UE5  24  
UE5  C31  C25  C  0  1  Y  N  N  42.080  -42.729  23.918    7.930   3.418  -1.311  C31  UE5  25  
UE5  C32  C26  C  0  1  Y  N  N  43.170  -43.595  23.689    8.888   4.407  -1.427  C32  UE5  26  
UE5  C33  C27  C  0  1  Y  N  N  43.540  -43.944  22.376    9.587   4.826  -0.310  C33  UE5  27  
UE5  C34  C28  C  0  1  Y  N  N  42.830  -43.430  21.277    9.328   4.255   0.922  C34  UE5  28  
UE5  C35  C29  C  0  1  Y  N  N  41.743  -42.570  21.501    8.366   3.269   1.038  C35  UE5  29  
UE5  C36  C30  C  0  1  Y  N  N  41.060  -39.108  24.810    5.119  -0.619   0.174  C36  UE5  30  
UE5  C39  C31  C  0  1  N  N  N  42.836  -26.733  20.816   -9.121   0.562   0.603  C39  UE5  31  
UE5  C40  C32  C  0  1  N  N  N  42.477  -25.305  21.376   -9.312   1.798   1.486  C40  UE5  32  
UE5  N06  N1   N  0  1  N  N  N  42.956  -27.658  21.798   -7.716   0.469   0.186  N06  UE5  33  
UE5  N15  N2   N  0  1  N  N  N  44.005  -33.415  26.116   -1.076  -2.125  -0.374  N15  UE5  34  
UE5  N22  N3   N  0  1  N  N  N  42.484  -37.165  25.271    3.029  -1.782   0.484  N22  UE5  35  
UE5  N24  N4   N  0  1  Y  N  N  41.037  -38.113  26.969    5.024  -2.960   0.040  N24  UE5  36  
UE5  N26  N5   N  0  1  Y  N  N  39.662  -39.991  26.512    7.041  -1.890  -0.269  N26  UE5  37  
UE5  N28  N6   N  0  1  N  N  N  39.647  -41.071  24.351    7.251   0.458  -0.156  N28  UE5  38  
UE5  O37  O1   O  0  1  N  N  N  44.645  -36.732  27.496    0.408  -4.390   0.648  O37  UE5  39  
UE5  O38  O2   O  0  1  N  N  N  46.205  -32.982  25.582   -1.264  -1.028  -2.296  O38  UE5  40  
UE5  H1   H1   H  0  1  N  N  N  46.453  -31.751  23.191   -3.540  -0.224  -2.952  H1   UE5  41  
UE5  H2   H2   H  0  1  N  N  N  43.118  -36.862  23.286    3.188  -0.092   1.724  H2   UE5  42  
UE5  H3   H3   H  0  1  N  N  N  43.122  -38.571  23.840    3.148  -1.653   2.578  H3   UE5  43  
UE5  H4   H4   H  0  1  N  N  N  42.491  -35.070  25.529    2.884  -3.700   1.328  H4   UE5  44  
UE5  H5   H5   H  0  1  N  N  N  42.180  -36.022  27.020    2.730  -3.642  -0.444  H5   UE5  45  
UE5  H6   H6   H  0  1  N  N  N  45.000  -23.940  23.296   -9.730   2.322  -1.155  H6   UE5  46  
UE5  H7   H7   H  0  1  N  N  N  45.124  -24.845  21.749  -10.855   3.305  -0.187  H7   UE5  47  
UE5  H8   H8   H  0  1  N  N  N  44.235  -23.285  21.809   -9.531   4.090  -1.080  H8   UE5  48  
UE5  H9   H9   H  0  1  N  N  N  42.850  -23.906  24.549  -10.074   4.382   1.928  H9   UE5  49  
UE5  H10  H10  H  0  1  N  N  N  42.031  -23.186  23.121   -8.389   4.171   2.464  H10  UE5  50  
UE5  H11  H11  H  0  1  N  N  N  41.388  -24.692  23.860   -8.750   5.170   1.036  H11  UE5  51  
UE5  H12  H12  H  0  1  N  N  N  42.662  -26.464  24.108   -7.178   3.773  -0.360  H12  UE5  52  
UE5  H13  H13  H  0  1  N  N  N  44.381  -25.944  24.152   -6.803   2.834   1.106  H13  UE5  53  
UE5  H14  H14  H  0  1  N  N  N  44.147  -28.180  23.238   -7.964   1.714  -1.487  H14  UE5  54  
UE5  H15  H15  H  0  1  N  N  N  44.777  -27.024  22.016   -6.284   1.524  -0.930  H15  UE5  55  
UE5  H16  H16  H  0  1  N  N  N  42.298  -29.259  20.827   -7.959  -0.733  -1.519  H16  UE5  56  
UE5  H17  H17  H  0  1  N  N  N  43.999  -28.767  20.524   -7.862  -1.620   0.021  H17  UE5  57  
UE5  H18  H18  H  0  1  N  N  N  45.646  -30.166  21.469   -5.960   0.067  -2.620  H18  UE5  58  
UE5  H19  H19  H  0  1  N  N  N  41.871  -29.912  23.492   -5.725  -2.039   1.083  H19  UE5  59  
UE5  H20  H20  H  0  1  N  N  N  42.695  -31.478  25.207   -3.302  -2.329   0.777  H20  UE5  60  
UE5  H21  H21  H  0  1  N  N  N  45.552  -34.238  27.317    0.844  -1.322  -0.634  H21  UE5  61  
UE5  H22  H22  H  0  1  N  N  N  43.912  -34.290  28.049    0.547  -2.859  -1.482  H22  UE5  62  
UE5  H23  H23  H  0  1  N  N  N  46.147  -35.900  25.483   -0.494  -2.253   2.004  H23  UE5  63  
UE5  H24  H24  H  0  1  N  N  N  44.805  -35.200  24.515    0.970  -2.913   2.774  H24  UE5  64  
UE5  H25  H25  H  0  1  N  N  N  45.060  -38.170  25.311    1.006  -0.447   2.859  H25  UE5  65  
UE5  H26  H26  H  0  1  N  N  N  45.472  -37.493  23.699    0.812  -0.370   1.091  H26  UE5  66  
UE5  H27  H27  H  0  1  N  N  N  39.731  -39.011  28.394    6.802  -3.944  -0.357  H27  UE5  67  
UE5  H28  H28  H  0  1  N  N  N  40.477  -40.260  22.634    6.180   1.808   1.040  H28  UE5  68  
UE5  H29  H29  H  0  1  N  N  N  39.339  -41.627  22.379    5.853   1.921  -0.706  H29  UE5  69  
UE5  H30  H30  H  0  1  N  N  N  41.797  -42.463  24.926    7.383   3.091  -2.184  H30  UE5  70  
UE5  H31  H31  H  0  1  N  N  N  43.724  -43.993  24.526    9.090   4.853  -2.389  H31  UE5  71  
UE5  H32  H32  H  0  1  N  N  N  44.374  -44.610  22.212   10.336   5.599  -0.400  H32  UE5  72  
UE5  H33  H33  H  0  1  N  N  N  43.118  -43.694  20.270    9.872   4.585   1.795  H33  UE5  73  
UE5  H34  H34  H  0  1  N  N  N  41.190  -42.175  20.661    8.164   2.823   2.001  H34  UE5  74  
UE5  H35  H35  H  0  1  N  N  N  41.435  -39.130  23.797    4.636   0.335   0.326  H35  UE5  75  
UE5  H36  H36  H  0  1  N  N  N  42.041  -27.052  20.126   -9.394  -0.331   1.165  H36  UE5  76  
UE5  H37  H37  H  0  1  N  N  N  43.790  -26.669  20.272   -9.757   0.645  -0.279  H37  UE5  77  
UE5  H38  H38  H  0  1  N  N  N  42.765  -24.556  20.623   -8.687   1.709   2.375  H38  UE5  78  
UE5  H39  H39  H  0  1  N  N  N  41.390  -25.261  21.540  -10.358   1.875   1.783  H39  UE5  79  
UE5  H41  H41  H  0  1  N  N  N  43.033  -33.243  25.958   -1.506  -2.479   0.420  H41  UE5  80  
UE5  H42  H42  H  0  1  N  N  N  38.664  -40.919  24.253    8.202   0.397  -0.338  H42  UE5  81  
UE5  H43  H43  H  0  1  N  N  N  44.114  -36.602  28.273   -0.555  -4.420   0.733  H43  UE5  82  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
UE5  C39  C40  SING  N  N   1  
UE5  C39  N06  SING  N  N   2  
UE5  C34  C35  DOUB  Y  N   3  
UE5  C34  C33  SING  Y  N   4  
UE5  C07  N06  SING  N  N   5  
UE5  C07  C08  SING  N  N   6  
UE5  C40  C02  SING  N  N   7  
UE5  C35  C30  SING  Y  N   8  
UE5  N06  C05  SING  N  N   9  
UE5  C09  C08  DOUB  Y  N  10  
UE5  C09  C10  SING  Y  N  11  
UE5  C01  C02  SING  N  N  12  
UE5  C33  C32  DOUB  Y  N  13  
UE5  C08  C11  SING  Y  N  14  
UE5  C05  C04  SING  N  N  15  
UE5  C02  C04  SING  N  N  16  
UE5  C02  C03  SING  N  N  17  
UE5  C30  C29  SING  N  N  18  
UE5  C30  C31  DOUB  Y  N  19  
UE5  C29  N28  SING  N  N  20  
UE5  C10  C13  DOUB  Y  N  21  
UE5  C11  C12  DOUB  Y  N  22  
UE5  C32  C31  SING  Y  N  23  
UE5  C20  C19  SING  N  N  24  
UE5  C20  N22  SING  N  N  25  
UE5  C13  C12  SING  Y  N  26  
UE5  C13  C14  SING  N  N  27  
UE5  N28  C27  SING  N  N  28  
UE5  C19  C18  SING  N  N  29  
UE5  C36  C27  DOUB  Y  N  30  
UE5  C36  C23  SING  Y  N  31  
UE5  C18  C17  SING  N  N  32  
UE5  C27  N26  SING  Y  N  33  
UE5  N22  C23  SING  N  N  34  
UE5  N22  C21  SING  N  N  35  
UE5  C14  O38  DOUB  N  N  36  
UE5  C14  N15  SING  N  N  37  
UE5  C23  N24  DOUB  Y  N  38  
UE5  C21  C17  SING  N  N  39  
UE5  N15  C16  SING  N  N  40  
UE5  C17  C16  SING  N  N  41  
UE5  C17  O37  SING  N  N  42  
UE5  N26  C25  DOUB  Y  N  43  
UE5  N24  C25  SING  Y  N  44  
UE5  C10  H1   SING  N  N  45  
UE5  C20  H2   SING  N  N  46  
UE5  C20  H3   SING  N  N  47  
UE5  C21  H4   SING  N  N  48  
UE5  C21  H5   SING  N  N  49  
UE5  C01  H6   SING  N  N  50  
UE5  C01  H7   SING  N  N  51  
UE5  C01  H8   SING  N  N  52  
UE5  C03  H9   SING  N  N  53  
UE5  C03  H10  SING  N  N  54  
UE5  C03  H11  SING  N  N  55  
UE5  C04  H12  SING  N  N  56  
UE5  C04  H13  SING  N  N  57  
UE5  C05  H14  SING  N  N  58  
UE5  C05  H15  SING  N  N  59  
UE5  C07  H16  SING  N  N  60  
UE5  C07  H17  SING  N  N  61  
UE5  C09  H18  SING  N  N  62  
UE5  C11  H19  SING  N  N  63  
UE5  C12  H20  SING  N  N  64  
UE5  C16  H21  SING  N  N  65  
UE5  C16  H22  SING  N  N  66  
UE5  C18  H23  SING  N  N  67  
UE5  C18  H24  SING  N  N  68  
UE5  C19  H25  SING  N  N  69  
UE5  C19  H26  SING  N  N  70  
UE5  C25  H27  SING  N  N  71  
UE5  C29  H28  SING  N  N  72  
UE5  C29  H29  SING  N  N  73  
UE5  C31  H30  SING  N  N  74  
UE5  C32  H31  SING  N  N  75  
UE5  C33  H32  SING  N  N  76  
UE5  C34  H33  SING  N  N  77  
UE5  C35  H34  SING  N  N  78  
UE5  C36  H35  SING  N  N  79  
UE5  C39  H36  SING  N  N  80  
UE5  C39  H37  SING  N  N  81  
UE5  C40  H38  SING  N  N  82  
UE5  C40  H39  SING  N  N  83  
UE5  N15  H41  SING  N  N  84  
UE5  N28  H42  SING  N  N  85  
UE5  O37  H43  SING  N  N  86  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
UE5  InChI             InChI                 1.03   "InChI=1S/C32H42N6O2/c1-31(2)14-17-37(18-15-31)21-26-9-11-27(12-10-26)30(39)34-22-32(40)13-6-16-38(23-32)29-19-28(35-24-36-29)33-20-25-7-4-3-5-8-25/h3-5,7-12,19,24,40H,6,13-18,20-23H2,1-2H3,(H,34,39)(H,33,35,36)/t32-/m1/s1"  
UE5  InChIKey          InChI                 1.03   UMNYWWVELYOOIU-JGCGQSQUSA-N  
UE5  SMILES_CANONICAL  CACTVS                3.385  "CC1(C)CCN(CC1)Cc2ccc(cc2)C(=O)NC[C@]3(O)CCCN(C3)c4cc(NCc5ccccc5)ncn4"  
UE5  SMILES            CACTVS                3.385  "CC1(C)CCN(CC1)Cc2ccc(cc2)C(=O)NC[C]3(O)CCCN(C3)c4cc(NCc5ccccc5)ncn4"  
UE5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1(CCN(CC1)Cc2ccc(cc2)C(=O)NC[C@@]3(CCCN(C3)c4cc(ncn4)NCc5ccccc5)O)C"  
UE5  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(CCN(CC1)Cc2ccc(cc2)C(=O)NCC3(CCCN(C3)c4cc(ncn4)NCc5ccccc5)O)C"  
#
_pdbx_chem_comp_identifier.comp_id          UE5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "4-[(4,4-dimethylpiperidin-1-yl)methyl]-~{N}-[[(3~{R})-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide"
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     UE5
_pdbx_chem_comp_synonyms.name        "4-[(4,4-dimethylpiperidin-1-yl)methyl]-~{N}-[[(3~{R})-3-oxidanyl-1-[6-[(phenylmethyl)amino]pyrimidin-4-yl]piperidin-3-yl]methyl]benzamide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
UE5  "Create component"  2021-02-11  PDBE  
UE5  "Initial release"   2021-10-20  RCSB  
##
