data_T25
#

_chem_comp.id                                   T25
_chem_comp.name                                 "(9Z)-11-[(2R,3S)-3-pentyloxiran-2-yl]undec-9-enoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C18 H32 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "12R,13S-epoxy-9(Z)-octadecenoic acid"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-10-10
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       296.445
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    T25
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2RCL
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T25  O1    O1    O  0  1  N  N  N  -2.509  31.376  25.895   7.927   0.353   0.900  O1    T25   1  
T25  C1    C1    C  0  1  N  N  N  -1.304  31.748  25.816   7.581   1.261   0.181  C1    T25   2  
T25  O2    O2    O  0  1  N  N  N  -0.755  32.550  26.623   8.443   2.246  -0.118  O2    T25   3  
T25  C2    C2    C  0  1  N  N  N  -0.461  31.186  24.679   6.185   1.284  -0.385  C2    T25   4  
T25  C3    C3    C  0  1  N  N  N   0.724  30.371  25.218   5.417   0.053   0.102  C3    T25   5  
T25  C4    C4    C  0  1  N  N  N   0.323  29.188  26.109   3.999   0.076  -0.472  C4    T25   6  
T25  C5    C5    C  0  1  N  N  N  -0.899  28.424  25.571   3.231  -1.155   0.015  C5    T25   7  
T25  C6    C6    C  0  1  N  N  N  -1.085  27.083  26.274   1.814  -1.132  -0.560  C6    T25   8  
T25  C7    C7    C  0  1  N  N  N  -2.112  27.144  27.390   1.046  -2.362  -0.073  C7    T25   9  
T25  C8    C8    C  0  1  N  N  N  -1.499  26.500  28.626  -0.372  -2.339  -0.647  C8    T25  10  
T25  C9    C9    C  0  1  N  N  N  -2.394  26.781  29.826  -1.128  -3.551  -0.168  C9    T25  11  
T25  C10   C10   C  0  1  N  N  N  -1.666  26.997  31.153  -2.298  -3.410   0.405  C10   T25  12  
T25  C11   C11   C  0  1  N  N  N  -0.147  26.883  31.120  -2.964  -2.058   0.433  C11   T25  13  
T25  C12   C12   C  0  1  N  N  R   0.373  27.036  32.554  -4.376  -2.174  -0.146  C12   T25  14  
T25  O3    O3    O  0  1  N  N  N   1.053  25.865  33.023  -5.474  -1.842   0.706  O3    T25  15  
T25  C13   C13   C  0  1  N  N  S   1.896  26.984  32.712  -5.184  -0.886  -0.317  C13   T25  16  
T25  C14   C14   C  0  1  N  N  N   2.678  26.674  31.441  -4.526   0.430   0.103  C14   T25  17  
T25  C15   C15   C  0  1  N  N  N   3.198  27.913  30.712  -5.444   1.598  -0.262  C15   T25  18  
T25  C16   C16   C  0  1  N  N  N   2.964  27.724  29.194  -4.785   2.914   0.157  C16   T25  19  
T25  C17   C17   C  0  1  N  N  N   4.078  26.888  28.580  -5.703   4.082  -0.208  C17   T25  20  
T25  C18   C18   C  0  1  N  N  N   4.639  27.523  27.321  -5.045   5.398   0.212  C18   T25  21  
T25  HO2   HO2   H  0  1  N  N  N  -1.385  32.818  27.281   9.328   2.186   0.265  HO2   T25  22  
T25  H21   1H2   H  0  1  N  N  N  -0.075  32.021  24.075   5.672   2.186  -0.052  H21   T25  23  
T25  H22   2H2   H  0  1  N  N  N  -1.093  30.523  24.070   6.233   1.274  -1.474  H22   T25  24  
T25  H31   1H3   H  0  1  N  N  N   1.280  29.972  24.357   5.929  -0.850  -0.231  H31   T25  25  
T25  H32   2H3   H  0  1  N  N  N   1.320  31.052  25.843   5.368   0.062   1.191  H32   T25  26  
T25  H41   1H4   H  0  1  N  N  N   1.172  28.491  26.162   3.487   0.979  -0.139  H41   T25  27  
T25  H42   2H4   H  0  1  N  N  N   0.055  29.591  27.097   4.048   0.067  -1.561  H42   T25  28  
T25  H51   1H5   H  0  1  N  N  N  -1.798  29.036  25.736   3.743  -2.057  -0.318  H51   T25  29  
T25  H52   2H5   H  0  1  N  N  N  -0.738  28.230  24.500   3.183  -1.145   1.104  H52   T25  30  
T25  H61   1H6   H  0  1  N  N  N  -1.423  26.345  25.531   1.301  -0.229  -0.227  H61   T25  31  
T25  H62   2H6   H  0  1  N  N  N  -0.120  26.805  26.723   1.862  -1.141  -1.649  H62   T25  32  
T25  H71   1H7   H  0  1  N  N  N  -2.375  28.191  27.602   1.558  -3.265  -0.406  H71   T25  33  
T25  H72   2H7   H  0  1  N  N  N  -3.028  26.611  27.096   0.997  -2.353   1.016  H72   T25  34  
T25  H81   1H8   H  0  1  N  N  N  -1.415  25.414  28.474  -0.884  -1.436  -0.314  H81   T25  35  
T25  H82   2H8   H  0  1  N  N  N  -0.497  26.917  28.804  -0.323  -2.349  -1.736  H82   T25  36  
T25  H9    H9    H  0  1  N  N  N  -3.470  26.825  29.745  -0.706  -4.537  -0.296  H9    T25  37  
T25  H10   H10   H  0  1  N  N  N  -2.200  27.219  32.065  -2.784  -4.261   0.857  H10   T25  38  
T25  H111  1H11  H  0  0  N  N  N   0.147  25.903  30.717  -3.021  -1.702   1.461  H111  T25  39  
T25  H112  2H11  H  0  0  N  N  N   0.279  27.665  30.475  -2.384  -1.355  -0.164  H112  T25  40  
T25  H12   H12   H  0  1  N  N  N  -0.423  27.706  32.910  -4.523  -2.967  -0.879  H12   T25  41  
T25  H13   H13   H  0  1  N  N  N   2.630  27.636  33.207  -5.869  -0.825  -1.163  H13   T25  42  
T25  H141  1H14  H  0  0  N  N  N   2.010  26.132  30.755  -4.356   0.424   1.179  H141  T25  43  
T25  H142  2H14  H  0  0  N  N  N   3.558  26.086  31.741  -3.573   0.540  -0.415  H142  T25  44  
T25  H151  1H15  H  0  0  N  N  N   4.273  28.038  30.910  -5.614   1.604  -1.339  H151  T25  45  
T25  H152  2H15  H  0  0  N  N  N   2.667  28.809  31.066  -6.397   1.487   0.256  H152  T25  46  
T25  H161  1H16  H  0  0  N  N  N   2.944  28.710  28.707  -4.615   2.908   1.234  H161  T25  47  
T25  H162  2H16  H  0  0  N  N  N   2.006  27.204  29.044  -3.833   3.025  -0.361  H162  T25  48  
T25  H171  1H17  H  0  0  N  N  N   3.673  25.898  28.324  -5.873   4.088  -1.284  H171  T25  49  
T25  H172  2H17  H  0  0  N  N  N   4.892  26.813  29.316  -6.656   3.972   0.310  H172  T25  50  
T25  H181  1H18  H  0  0  N  N  N   4.775  28.602  27.483  -4.092   5.509  -0.306  H181  T25  51  
T25  H182  2H18  H  0  0  N  N  N   5.609  27.064  27.080  -5.699   6.231  -0.048  H182  T25  52  
T25  H183  3H18  H  0  0  N  N  N   3.940  27.363  26.487  -4.875   5.392   1.288  H183  T25  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T25  C2   C3    SING  N  N   1  
T25  C2   C1    SING  N  N   2  
T25  C3   C4    SING  N  N   3  
T25  C5   C4    SING  N  N   4  
T25  C5   C6    SING  N  N   5  
T25  C1   O1    DOUB  N  N   6  
T25  C1   O2    SING  N  N   7  
T25  C6   C7    SING  N  N   8  
T25  C18  C17   SING  N  N   9  
T25  C7   C8    SING  N  N  10  
T25  C17  C16   SING  N  N  11  
T25  C8   C9    SING  N  N  12  
T25  C16  C15   SING  N  N  13  
T25  C9   C10   DOUB  N  N  14  
T25  C15  C14   SING  N  N  15  
T25  C11  C10   SING  N  N  16  
T25  C11  C12   SING  N  N  17  
T25  C14  C13   SING  N  N  18  
T25  C12  C13   SING  N  N  19  
T25  C12  O3    SING  N  N  20  
T25  C13  O3    SING  N  N  21  
T25  O2   HO2   SING  N  N  22  
T25  C2   H21   SING  N  N  23  
T25  C2   H22   SING  N  N  24  
T25  C3   H31   SING  N  N  25  
T25  C3   H32   SING  N  Z  26  
T25  C4   H41   SING  N  N  27  
T25  C4   H42   SING  N  N  28  
T25  C5   H51   SING  N  N  29  
T25  C5   H52   SING  N  N  30  
T25  C6   H61   SING  N  N  31  
T25  C6   H62   SING  N  N  32  
T25  C7   H71   SING  N  N  33  
T25  C7   H72   SING  N  N  34  
T25  C8   H81   SING  N  N  35  
T25  C8   H82   SING  N  N  36  
T25  C9   H9    SING  N  N  37  
T25  C10  H10   SING  N  N  38  
T25  C11  H111  SING  N  N  39  
T25  C11  H112  SING  N  N  40  
T25  C12  H12   SING  N  N  41  
T25  C13  H13   SING  N  N  42  
T25  C14  H141  SING  N  N  43  
T25  C14  H142  SING  N  N  44  
T25  C15  H151  SING  N  N  45  
T25  C15  H152  SING  N  N  46  
T25  C16  H161  SING  N  N  47  
T25  C16  H162  SING  N  N  48  
T25  C17  H171  SING  N  N  49  
T25  C17  H172  SING  N  N  50  
T25  C18  H181  SING  N  N  51  
T25  C18  H182  SING  N  N  52  
T25  C18  H183  SING  N  N  53  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T25  SMILES            ACDLabs               10.04  "O=C(O)CCCCCCC/C=C\CC1OC1CCCCC"  
T25  SMILES_CANONICAL  CACTVS                3.341  "CCCCC[C@@H]1O[C@@H]1C\C=C/CCCCCCCC(O)=O"  
T25  SMILES            CACTVS                3.341  "CCCCC[CH]1O[CH]1CC=CCCCCCCCC(O)=O"  
T25  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCCCC[C@H]1[C@H](O1)C\C=C/CCCCCCCC(=O)O"  
T25  SMILES            "OpenEye OEToolkits"  1.5.0  "CCCCCC1C(O1)CC=CCCCCCCCC(=O)O"  
T25  InChI             InChI                 1.03   "InChI=1S/C18H32O3/c1-2-3-10-13-16-17(21-16)14-11-8-6-4-5-7-9-12-15-18(19)20/h8,11,16-17H,2-7,9-10,12-15H2,1H3,(H,19,20)/b11-8-/t16-,17+/m0/s1"  
T25  InChIKey          InChI                 1.03   CCPPLLJZDQAOHD-BEBBCNLGSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T25  "SYSTEMATIC NAME"  ACDLabs               10.04  "(9Z)-11-[(2R,3S)-3-pentyloxiran-2-yl]undec-9-enoic acid"  
T25  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(Z)-11-[(2R,3S)-3-pentyloxiran-2-yl]undec-9-enoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T25  "Create component"   2007-10-10  EBI   
T25  "Modify descriptor"  2011-06-04  RCSB  
T25  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     T25
_pdbx_chem_comp_synonyms.name        "12R,13S-epoxy-9(Z)-octadecenoic acid"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
