data_SJ5
# 
_chem_comp.id                                    SJ5 
_chem_comp.name                                  "(3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H11 N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-12-27 
_chem_comp.pdbx_modified_date                    2018-12-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        161.156 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SJ5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5Z19 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SJ5 C2  C1  C 0 1 N N N -403.996 -118.374 849.296 2.034  1.172  0.333  C2  SJ5 1  
SJ5 C3  C2  C 0 1 N N R -403.722 -116.932 848.886 1.806  -0.214 -0.276 C3  SJ5 2  
SJ5 O3  O1  O 0 1 N N N -402.387 -116.823 848.384 2.790  -1.122 0.222  O3  SJ5 3  
SJ5 N   N1  N 0 1 N N N -405.412 -118.644 849.501 1.010  2.100  -0.163 N   SJ5 4  
SJ5 C7  C3  C 0 1 N N N -406.478 -117.950 848.792 -0.336 1.668  0.233  C7  SJ5 5  
SJ5 C5  C4  C 0 1 N N S -406.093 -116.515 848.453 -0.635 0.298  -0.379 C5  SJ5 6  
SJ5 C6  C5  C 0 1 N N N -407.117 -115.916 847.534 -2.008 -0.154 0.045  C6  SJ5 7  
SJ5 O62 O2  O 0 1 N N N -407.308 -114.600 847.513 -3.085 0.583  -0.271 O62 SJ5 8  
SJ5 C4  C6  C 0 1 N N R -404.712 -116.492 847.823 0.409  -0.711 0.107  C4  SJ5 9  
SJ5 O4  O3  O 0 1 N N N -404.395 -115.175 847.364 0.169  -1.979 -0.506 O4  SJ5 10 
SJ5 O61 O4  O 0 1 N N N -407.783 -116.625 846.799 -2.141 -1.180 0.670  O61 SJ5 11 
SJ5 H1  H1  H 0 1 N N N -403.622 -119.041 848.505 1.968  1.106  1.419  H1  SJ5 12 
SJ5 H2  H2  H 0 1 N N N -403.460 -118.580 850.234 3.022  1.535  0.050  H2  SJ5 13 
SJ5 H3  H3  H 0 1 N N N -403.843 -116.287 849.769 1.885  -0.151 -1.361 H3  SJ5 14 
SJ5 H4  H4  H 0 1 N N N -401.773 -117.100 849.054 3.700  -0.867 0.018  H4  SJ5 15 
SJ5 H5  H5  H 0 1 N N N -405.582 -118.483 850.473 1.075  2.208  -1.164 H5  SJ5 16 
SJ5 H7  H7  H 0 1 N N N -407.377 -117.937 849.426 -0.390 1.600  1.320  H7  SJ5 17 
SJ5 H8  H8  H 0 1 N N N -406.695 -118.490 847.859 -1.069 2.392  -0.122 H8  SJ5 18 
SJ5 H9  H9  H 0 1 N N N -406.065 -115.930 849.384 -0.594 0.368  -1.466 H9  SJ5 19 
SJ5 H10 H10 H 0 1 N N N -407.986 -114.388 846.882 -3.945 0.253  0.023  H10 SJ5 20 
SJ5 H11 H11 H 0 1 N N N -404.685 -117.206 846.987 0.343  -0.811 1.191  H11 SJ5 21 
SJ5 H12 H12 H 0 1 N N N -403.529 -115.175 846.973 0.795  -2.668 -0.242 H12 SJ5 22 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SJ5 O61 C6  DOUB N N 1  
SJ5 O4  C4  SING N N 2  
SJ5 O62 C6  SING N N 3  
SJ5 C6  C5  SING N N 4  
SJ5 C4  C5  SING N N 5  
SJ5 C4  C3  SING N N 6  
SJ5 O3  C3  SING N N 7  
SJ5 C5  C7  SING N N 8  
SJ5 C7  N   SING N N 9  
SJ5 C3  C2  SING N N 10 
SJ5 C2  N   SING N N 11 
SJ5 C2  H1  SING N N 12 
SJ5 C2  H2  SING N N 13 
SJ5 C3  H3  SING N N 14 
SJ5 O3  H4  SING N N 15 
SJ5 N   H5  SING N N 16 
SJ5 C7  H7  SING N N 17 
SJ5 C7  H8  SING N N 18 
SJ5 C5  H9  SING N N 19 
SJ5 O62 H10 SING N N 20 
SJ5 C4  H11 SING N N 21 
SJ5 O4  H12 SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SJ5 SMILES           ACDLabs              12.01 "C1NCC(C(O)=O)C(C1O)O"                                                                   
SJ5 InChI            InChI                1.03  "InChI=1S/C6H11NO4/c8-4-2-7-1-3(5(4)9)6(10)11/h3-5,7-9H,1-2H2,(H,10,11)/t3-,4+,5+/m0/s1" 
SJ5 InChIKey         InChI                1.03  SSMLJUWXZFXWSF-VPENINKCSA-N                                                              
SJ5 SMILES_CANONICAL CACTVS               3.385 "O[C@@H]1CNC[C@@H]([C@H]1O)C(O)=O"                                                       
SJ5 SMILES           CACTVS               3.385 "O[CH]1CNC[CH]([CH]1O)C(O)=O"                                                            
SJ5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1[C@@H]([C@H]([C@@H](CN1)O)O)C(=O)O"                                                   
SJ5 SMILES           "OpenEye OEToolkits" 2.0.6 "C1C(C(C(CN1)O)O)C(=O)O"                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SJ5 "SYSTEMATIC NAME" ACDLabs              12.01 "(3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid"              
SJ5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)piperidine-3-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SJ5 "Create component" 2017-12-27 RCSB 
SJ5 "Initial release"  2018-12-12 RCSB 
# 
