data_RV5
#

_chem_comp.id                                   RV5
_chem_comp.name                                 "N-1,2,3-Benzothiadiazol-6-yl-N'-[2-oxo-2-(1-piperidinyl)ethyl]urea also called unc-2327"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C14 H17 N5 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "1-(1,2,3-benzothiadiazol-6-yl)-3-(2-oxidanylidene-2-piperidin-1-yl-ethyl)urea"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-10-22
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       319.382
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RV5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7AQE
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RV5  C10   C1   C  0  1  N  N  N   8.831  -4.696  26.465   5.505   2.182   0.081  C10   RV5   1  
RV5  C13   C2   C  0  1  N  N  N   7.440  -4.502  25.839   4.694   1.198   0.930  C13   RV5   2  
RV5  C15   C3   C  0  1  N  N  N   6.549  -1.715  24.228   2.267  -0.180   0.345  C15   RV5   3  
RV5  C17   C4   C  0  1  Y  N  N   7.422   3.042  22.518  -2.415  -1.197  -0.118  C17   RV5   4  
RV5  C20   C5   C  0  1  Y  N  N   6.734   4.053  21.815  -3.401  -2.136   0.188  C20   RV5   5  
RV5  C21   C6   C  0  1  Y  N  N   8.253   5.730  22.544  -5.091  -0.431   0.118  C21   RV5   6  
RV5  C22   C7   C  0  1  Y  N  N   7.136   5.374  21.815  -4.707  -1.773   0.305  C22   RV5   7  
RV5  C09   C8   C  0  1  N  N  N   9.548  -5.887  25.874   6.918   1.632  -0.121  C09   RV5   8  
RV5  C11   C9   C  0  1  N  N  N   9.576  -5.765  24.362   6.846   0.298  -0.868  C11   RV5   9  
RV5  C12   C10  C  0  1  N  N  N   8.219  -5.414  23.716   6.050  -0.709  -0.031  C12   RV5  10  
RV5  C14   C11  C  0  1  N  N  N   7.226  -3.054  23.632   3.603  -0.791   0.008  C14   RV5  11  
RV5  C16   C12  C  0  1  N  N  N   7.053   0.672  23.491  -0.092  -0.754   0.145  C16   RV5  12  
RV5  C18   C13  C  0  1  Y  N  N   8.552   3.422  23.272  -2.762   0.131  -0.307  C18   RV5  13  
RV5  C19   C14  C  0  1  Y  N  N   8.966   4.750  23.278  -4.087   0.509  -0.190  C19   RV5  14  
RV5  N04   N1   N  0  1  N  N  N   7.569  -4.238  24.379   4.740  -0.125   0.292  N04   RV5  15  
RV5  N05   N2   N  0  1  N  N  N   6.456  -0.598  23.251   1.196  -1.093  -0.060  N05   RV5  16  
RV5  N06   N3   N  0  1  N  N  N   6.948   1.696  22.493  -1.078  -1.594  -0.228  N06   RV5  17  
RV5  N07   N4   N  0  1  Y  N  N   8.821   7.044  22.665  -6.284   0.173   0.176  N07   RV5  18  
RV5  N08   N5   N  0  1  Y  N  N   9.826   7.083  23.384  -6.374   1.424  -0.036  N08   RV5  19  
RV5  O02   O1   O  0  1  N  N  N   7.458  -3.082  22.421   3.655  -1.883  -0.518  O02   RV5  20  
RV5  O03   O2   O  0  1  N  N  N   7.652   0.897  24.542  -0.365   0.310   0.666  O03   RV5  21  
RV5  S01   S1   S  0  1  Y  N  N  10.295   5.543  24.066  -4.964   2.033  -0.341  S01   RV5  22  
RV5  H102  H1   H  0  0  N  N  N   9.432  -3.793  26.285   5.022   2.311  -0.887  H102  RV5  23  
RV5  H101  H2   H  0  0  N  N  N   8.716  -4.850  27.548   5.559   3.144   0.592  H101  RV5  24  
RV5  H132  H3   H  0  0  N  N  N   6.940  -3.649  26.320   5.123   1.137   1.929  H132  RV5  25  
RV5  H131  H4   H  0  0  N  N  N   6.842  -5.412  25.993   3.660   1.538   0.996  H131  RV5  26  
RV5  H151  H5   H  0  0  N  N  N   7.149  -1.376  25.085   2.209  -0.004   1.419  H151  RV5  27  
RV5  H152  H6   H  0  0  N  N  N   5.533  -1.963  24.568   2.157   0.767  -0.184  H152  RV5  28  
RV5  H201  H7   H  0  0  N  N  N   5.853   3.782  21.252  -3.122  -3.169   0.334  H201  RV5  29  
RV5  H221  H8   H  0  0  N  N  N   6.586   6.116  21.255  -5.453  -2.517   0.542  H221  RV5  30  
RV5  H092  H9   H  0  0  N  N  N   9.020  -6.810  26.157   7.505   2.342  -0.704  H092  RV5  31  
RV5  H091  H10  H  0  0  N  N  N  10.578  -5.921  26.258   7.391   1.479   0.849  H091  RV5  32  
RV5  H111  H11  H  0  0  N  N  N   9.914  -6.726  23.947   6.351   0.445  -1.828  H111  RV5  33  
RV5  H112  H12  H  0  0  N  N  N  10.296  -4.977  24.095   7.854  -0.082  -1.033  H112  RV5  34  
RV5  H122  H13  H  0  0  N  N  N   8.382  -5.178  22.654   5.911  -1.628  -0.600  H122  RV5  35  
RV5  H121  H14  H  0  0  N  N  N   7.550  -6.283  23.800   6.590  -0.925   0.891  H121  RV5  36  
RV5  H181  H15  H  0  0  N  N  N   9.095   2.683  23.843  -2.005   0.864  -0.544  H181  RV5  37  
RV5  H051  H16  H  0  0  N  N  N   5.957  -0.744  22.397   1.414  -1.942  -0.475  H051  RV5  38  
RV5  H061  H17  H  0  0  N  N  N   6.472   1.427  21.655  -0.860  -2.475  -0.572  H061  RV5  39  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RV5  C20  C22   DOUB  Y  N   1  
RV5  C20  C17   SING  Y  N   2  
RV5  C22  C21   SING  Y  N   3  
RV5  O02  C14   DOUB  N  N   4  
RV5  N06  C17   SING  N  N   5  
RV5  N06  C16   SING  N  N   6  
RV5  C17  C18   DOUB  Y  N   7  
RV5  C21  N07   SING  Y  N   8  
RV5  C21  C19   DOUB  Y  N   9  
RV5  N07  N08   DOUB  Y  N  10  
RV5  N05  C16   SING  N  N  11  
RV5  N05  C15   SING  N  N  12  
RV5  C18  C19   SING  Y  N  13  
RV5  C19  S01   SING  Y  N  14  
RV5  N08  S01   SING  Y  N  15  
RV5  C16  O03   DOUB  N  N  16  
RV5  C14  C15   SING  N  N  17  
RV5  C14  N04   SING  N  N  18  
RV5  C12  C11   SING  N  N  19  
RV5  C12  N04   SING  N  N  20  
RV5  C11  C09   SING  N  N  21  
RV5  N04  C13   SING  N  N  22  
RV5  C13  C10   SING  N  N  23  
RV5  C09  C10   SING  N  N  24  
RV5  C10  H102  SING  N  N  25  
RV5  C10  H101  SING  N  N  26  
RV5  C13  H132  SING  N  N  27  
RV5  C13  H131  SING  N  N  28  
RV5  C15  H151  SING  N  N  29  
RV5  C15  H152  SING  N  N  30  
RV5  C20  H201  SING  N  N  31  
RV5  C22  H221  SING  N  N  32  
RV5  C09  H092  SING  N  N  33  
RV5  C09  H091  SING  N  N  34  
RV5  C11  H111  SING  N  N  35  
RV5  C11  H112  SING  N  N  36  
RV5  C12  H122  SING  N  N  37  
RV5  C12  H121  SING  N  N  38  
RV5  C18  H181  SING  N  N  39  
RV5  N05  H051  SING  N  N  40  
RV5  N06  H061  SING  N  N  41  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RV5  InChI             InChI                 1.03   "InChI=1S/C14H17N5O2S/c20-13(19-6-2-1-3-7-19)9-15-14(21)16-10-4-5-11-12(8-10)22-18-17-11/h4-5,8H,1-3,6-7,9H2,(H2,15,16,21)"  
RV5  InChIKey          InChI                 1.03   MYTRGTBDVGKKRO-UHFFFAOYSA-N  
RV5  SMILES_CANONICAL  CACTVS                3.385  "O=C(NCC(=O)N1CCCCC1)Nc2ccc3nnsc3c2"  
RV5  SMILES            CACTVS                3.385  "O=C(NCC(=O)N1CCCCC1)Nc2ccc3nnsc3c2"  
RV5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc2c(cc1NC(=O)NCC(=O)N3CCCCC3)snn2"  
RV5  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc2c(cc1NC(=O)NCC(=O)N3CCCCC3)snn2"  
#
_pdbx_chem_comp_identifier.comp_id          RV5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "1-(1,2,3-benzothiadiazol-6-yl)-3-(2-oxidanylidene-2-piperidin-1-yl-ethyl)urea"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RV5  "Create component"  2020-10-22  PDBE  
RV5  "Initial release"   2021-03-03  RCSB  
RV5  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     RV5
_pdbx_chem_comp_synonyms.name        "1-(1,2,3-benzothiadiazol-6-yl)-3-(2-oxidanylidene-2-piperidin-1-yl-ethyl)urea"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
