data_RU5
# 
_chem_comp.id                                    RU5 
_chem_comp.name                                  "2-[4-(4-CHLOROPHENOXY)PHENYL]-1H-BENZIMIDAZOLE-6-CARBOXAMIDE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H14 Cl N3 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-11-28 
_chem_comp.pdbx_modified_date                    2014-09-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        363.797 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RU5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4A9R 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RU5 C1   C1   C  0 1 N N N -11.851 46.455 2.805  -7.378 1.333  -0.275 C1   RU5 1  
RU5 N1   N1   N  0 1 N N N -10.814 45.548 2.354  -8.522 1.082  0.392  N1   RU5 2  
RU5 O1   O1   O  0 1 N N N -6.401  50.471 12.462 3.648  -1.855 -0.683 O1   RU5 3  
RU5 C2   C2   C  0 1 Y N N -11.738 47.109 4.177  -6.143 0.605  0.078  C2   RU5 4  
RU5 C3   C3   C  0 1 Y N N -10.562 47.219 4.749  -4.960 0.865  -0.614 C3   RU5 5  
RU5 N3   N3   N  0 1 Y N N -9.340  48.121 6.948  -2.508 0.200  -0.750 N3   RU5 6  
RU5 C4   C4   C  0 1 Y N N -10.439 47.874 6.122  -3.807 0.180  -0.277 C4   RU5 7  
RU5 N4   N4   N  0 1 Y N N -11.071 48.907 8.041  -2.587 -1.277 0.868  N4   RU5 8  
RU5 C5   C5   C  0 1 Y N N -9.797  48.767 8.133  -1.799 -0.711 -0.016 C5   RU5 9  
RU5 C6   C6   C  0 1 Y N N -11.503 48.327 6.731  -3.832 -0.774 0.759  C6   RU5 10 
RU5 C7   C7   C  0 1 Y N N -12.872 48.200 6.067  -5.030 -1.023 1.444  C7   RU5 11 
RU5 C8   C8   C  0 1 Y N N -12.980 47.635 4.885  -6.161 -0.341 1.112  C8   RU5 12 
RU5 C9   C9   C  0 1 Y N N -8.914  49.212 9.294  -0.364 -1.012 -0.192 C9   RU5 13 
RU5 CLA  CLA  CL 0 0 N N N -9.392  53.907 16.394 7.525  2.325  0.683  CLA  RU5 14 
RU5 C10  C10  C  0 1 Y N N -9.514  49.492 10.669 0.256  -1.966 0.619  C10  RU5 15 
RU5 C11  C11  C  0 1 Y N N -8.736  49.883 11.656 1.595  -2.244 0.452  C11  RU5 16 
RU5 C12  C12  C  0 1 Y N N -7.240  50.069 11.420 2.329  -1.578 -0.522 C12  RU5 17 
RU5 C13  C13  C  0 1 Y N N -6.726  49.832 10.235 1.716  -0.628 -1.330 C13  RU5 18 
RU5 C14  C14  C  0 1 Y N N -7.626  49.377 9.093  0.376  -0.349 -1.173 C14  RU5 19 
RU5 C15  C15  C  0 1 Y N N -7.100  51.266 13.373 4.547  -0.886 -0.367 C15  RU5 20 
RU5 C16  C16  C  0 1 Y N N -7.155  52.568 13.199 4.117  0.294  0.224  C16  RU5 21 
RU5 C17  C17  C  0 1 Y N N -7.913  53.439 14.196 5.032  1.278  0.545  C17  RU5 22 
RU5 C18  C18  C  0 1 Y N N -8.508  52.886 15.230 6.377  1.087  0.278  C18  RU5 23 
RU5 C19  C19  C  0 1 Y N N -8.443  51.376 15.434 6.807  -0.089 -0.311 C19  RU5 24 
RU5 C20  C20  C  0 1 Y N N -7.789  50.626 14.574 5.896  -1.077 -0.629 C20  RU5 25 
RU5 OAB  OAB  O  0 1 N N N -12.777 46.687 2.106  -7.364 2.154  -1.172 OAB  RU5 26 
RU5 HN1  HN1  H  0 1 N N N -10.882 45.119 1.453  -8.533 0.424  1.105  HN1  RU5 27 
RU5 HN1A HN1A H  0 0 N N N -10.031 45.351 2.944  -9.333 1.560  0.160  HN1A RU5 28 
RU5 H3   H3   H  0 1 N N N -9.681  46.846 4.248  -4.945 1.597  -1.408 H3   RU5 29 
RU5 HN3  HN3  H  0 1 N N N -8.391  47.884 6.742  -2.164 0.755  -1.468 HN3  RU5 30 
RU5 H7   H7   H  0 1 N N N -13.752 48.575 6.569  -5.055 -1.754 2.239  H7   RU5 31 
RU5 H8   H8   H  0 1 N N N -13.949 47.544 4.416  -7.079 -0.535 1.646  H8   RU5 32 
RU5 H10  H10  H  0 1 N N N -10.575 49.370 10.832 -0.314 -2.484 1.377  H10  RU5 33 
RU5 H11  H11  H  0 1 N N N -9.156  50.072 12.633 2.075  -2.981 1.079  H11  RU5 34 
RU5 H13  H13  H  0 1 N N N -5.666  49.960 10.070 2.289  -0.112 -2.086 H13  RU5 35 
RU5 H14  H14  H  0 1 N N N -7.205  49.190 8.116  -0.101 0.386  -1.805 H14  RU5 36 
RU5 H16  H16  H  0 1 N N N -6.664  53.021 12.350 3.068  0.444  0.432  H16  RU5 37 
RU5 H17  H17  H  0 1 N N N -7.961  54.508 14.053 4.699  2.196  1.004  H17  RU5 38 
RU5 H19  H19  H  0 1 N N N -8.933  50.923 16.283 7.857  -0.236 -0.519 H19  RU5 39 
RU5 H20  H20  H  0 1 N N N -7.740  49.557 14.718 6.233  -1.997 -1.084 H20  RU5 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RU5 C1  N1   SING N N 1  
RU5 C1  C2   SING N N 2  
RU5 C1  OAB  DOUB N N 3  
RU5 O1  C12  SING N N 4  
RU5 O1  C15  SING N N 5  
RU5 C2  C3   DOUB Y N 6  
RU5 C2  C8   SING Y N 7  
RU5 C3  C4   SING Y N 8  
RU5 N3  C4   SING Y N 9  
RU5 N3  C5   SING Y N 10 
RU5 C4  C6   DOUB Y N 11 
RU5 N4  C5   DOUB Y N 12 
RU5 N4  C6   SING Y N 13 
RU5 C5  C9   SING N N 14 
RU5 C6  C7   SING Y N 15 
RU5 C7  C8   DOUB Y N 16 
RU5 C9  C10  DOUB Y N 17 
RU5 C9  C14  SING Y N 18 
RU5 CLA C18  SING N N 19 
RU5 C10 C11  SING Y N 20 
RU5 C11 C12  DOUB Y N 21 
RU5 C12 C13  SING Y N 22 
RU5 C13 C14  DOUB Y N 23 
RU5 C15 C16  DOUB Y N 24 
RU5 C15 C20  SING Y N 25 
RU5 C16 C17  SING Y N 26 
RU5 C17 C18  DOUB Y N 27 
RU5 C18 C19  SING Y N 28 
RU5 C19 C20  DOUB Y N 29 
RU5 N1  HN1  SING N N 30 
RU5 N1  HN1A SING N N 31 
RU5 C3  H3   SING N N 32 
RU5 N3  HN3  SING N N 33 
RU5 C7  H7   SING N N 34 
RU5 C8  H8   SING N N 35 
RU5 C10 H10  SING N N 36 
RU5 C11 H11  SING N N 37 
RU5 C13 H13  SING N N 38 
RU5 C14 H14  SING N N 39 
RU5 C16 H16  SING N N 40 
RU5 C17 H17  SING N N 41 
RU5 C19 H19  SING N N 42 
RU5 C20 H20  SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RU5 SMILES           ACDLabs              12.01 "Clc4ccc(Oc3ccc(c2nc1ccc(cc1n2)C(=O)N)cc3)cc4"                                                                                       
RU5 InChI            InChI                1.03  "InChI=1S/C20H14ClN3O2/c21-14-4-8-16(9-5-14)26-15-6-1-12(2-7-15)20-23-17-10-3-13(19(22)25)11-18(17)24-20/h1-11H,(H2,22,25)(H,23,24)" 
RU5 InChIKey         InChI                1.03  UXGJAOIJSROTTN-UHFFFAOYSA-N                                                                                                          
RU5 SMILES_CANONICAL CACTVS               3.385 "NC(=O)c1ccc2nc([nH]c2c1)c3ccc(Oc4ccc(Cl)cc4)cc3"                                                                                    
RU5 SMILES           CACTVS               3.385 "NC(=O)c1ccc2nc([nH]c2c1)c3ccc(Oc4ccc(Cl)cc4)cc3"                                                                                    
RU5 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1c2[nH]c3cc(ccc3n2)C(=O)N)Oc4ccc(cc4)Cl"                                                                                    
RU5 SMILES           "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1c2[nH]c3cc(ccc3n2)C(=O)N)Oc4ccc(cc4)Cl"                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RU5 "SYSTEMATIC NAME" ACDLabs              12.01 "2-[4-(4-chlorophenoxy)phenyl]-1H-benzimidazole-6-carboxamide"    
RU5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[4-(4-chloranylphenoxy)phenyl]-3H-benzimidazole-5-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RU5 "Create component"  2011-11-28 EBI  
RU5 "Initial release"   2012-10-05 RCSB 
RU5 "Modify descriptor" 2014-09-05 RCSB 
# 
