data_QY5
# 
_chem_comp.id                                    QY5 
_chem_comp.name                                  "~{N}-[3-bromanyl-2-(2-methylimidazol-1-yl)pyridin-4-yl]-3-[[3-bromanyl-2-(2-methylimidazol-1-yl)pyridin-4-yl]-propanoyl-amino]propanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H24 Br2 N8 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-08-20 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        616.308 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     QY5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7A47 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
QY5 C1  C1  C  0 1 N N N N N N 9.904  20.034 7.734  -1.215 1.195  -0.688 C1   QY5 1  
QY5 C2  C2  C  0 1 N N N N N N 8.488  19.740 8.182  0.027  1.309  0.198  C2   QY5 2  
QY5 C7  C3  C  0 1 Y N N N N N 5.647  16.031 9.245  4.748  0.196  -0.123 C7   QY5 3  
QY5 C8  C4  C  0 1 Y N N N N N 6.162  16.832 8.218  3.602  0.651  -0.769 C8   QY5 4  
QY5 C9  C5  C  0 1 Y N N N N N 5.917  16.475 6.886  3.609  0.718  -2.163 C9   QY5 5  
QY5 C10 C6  C  0 1 Y N N N N N 5.175  15.352 6.611  4.741  0.334  -2.849 C10  QY5 6  
QY5 C12 C7  C  0 1 Y N N N N N 4.888  14.906 8.829  5.850  -0.167 -0.885 C12  QY5 7  
QY5 C13 C8  C  0 1 Y N N N N N 3.901  12.410 11.165 8.721  -0.784 1.096  C13  QY5 8  
QY5 C14 C9  C  0 1 Y N N N N N 4.882  13.070 10.509 7.659  -0.013 0.795  C14  QY5 9  
QY5 C16 C10 C  0 1 N N N N N N 1.893  14.955 9.620  7.365  -2.731 -1.639 C16  QY5 10 
QY5 N18 N1  N  0 1 Y N N N N N 2.668  12.950 10.883 8.730  -1.831 0.258  N18  QY5 11 
QY5 C19 C11 C  0 1 N N N N N N 10.103 24.649 5.865  -4.379 4.584  0.920  C19  QY5 12 
QY5 C20 C12 C  0 1 N N N N N N 10.133 23.815 7.136  -4.087 3.084  0.997  C20  QY5 13 
QY5 C22 C13 C  0 1 N N N N N N 9.768  22.342 6.946  -2.859 2.769  0.182  C22  QY5 14 
QY5 N23 N2  N  0 1 N N N N N N 10.217 21.454 7.872  -2.409 1.501  0.103  N23  QY5 15 
QY5 C27 C14 C  0 1 Y N N N N N 10.354 22.261 10.170 -2.741 0.139  2.085  C27  QY5 16 
QY5 N29 N3  N  0 1 Y N N N N N 12.468 22.528 11.266 -4.402 -1.521 2.103  N29  QY5 17 
QY5 C30 C15 C  0 1 Y N N N N N 13.066 22.083 10.150 -4.761 -1.227 0.864  C30  QY5 18 
QY5 C31 C16 C  0 1 Y N N N N N 16.503 21.339 10.704 -6.972 -3.105 -1.168 C31  QY5 19 
QY5 C32 C17 C  0 1 Y N N N N N 15.198 21.124 10.980 -5.770 -2.530 -0.981 C32  QY5 20 
QY5 C34 C18 C  0 1 N N N N N N 15.093 23.918 8.636  -7.516 -1.718 2.132  C34  QY5 21 
QY5 C35 C19 C  0 1 Y N N N N N 15.426 22.760 9.504  -7.030 -2.181 0.782  C35  QY5 22 
QY5 O3  O1  O  0 1 N N N N N N 8.597  17.723 6.920  1.148  0.707  -1.790 O3   QY5 23 
QY5 C4  C20 C  0 1 N N N N N N 8.029  18.373 7.800  1.255  0.994  -0.616 C4   QY5 24 
QY5 N5  N4  N  0 1 N N N N N N 6.947  17.955 8.498  2.473  1.031  -0.040 N5   QY5 25 
QY5 BR1 BR1 BR 0 0 N N N N N N 6.011  16.293 11.109 4.806  0.082  1.763  BR6  QY5 26 
QY5 N11 N5  N  0 1 Y N N N N N 4.659  14.566 7.556  5.812  -0.093 -2.206 N11  QY5 27 
QY5 N15 N6  N  0 1 Y N N N N N 4.248  14.068 9.783  7.011  -0.620 -0.250 N15  QY5 28 
QY5 C17 C21 C  0 1 Y N N N N N 2.906  13.967 10.068 7.710  -1.746 -0.552 C17  QY5 29 
QY5 O21 O2  O  0 1 N N N N N N 9.072  21.989 6.002  -2.274 3.657  -0.402 O21  QY5 30 
QY5 BR2 BR2 BR 0 0 N N N N N N 13.272 20.999 7.413  -4.624 0.185  -1.617 BR24 QY5 31 
QY5 C25 C22 C  0 1 Y N N N N N 12.386 21.685 8.966  -4.111 -0.226 0.156  C25  QY5 32 
QY5 C26 C23 C  0 1 Y N N N N N 10.997 21.816 9.018  -3.082 0.479  0.776  C26  QY5 33 
QY5 C28 C24 C  0 1 Y N N N N N 11.130 22.585 11.261 -3.428 -0.876 2.717  C28  QY5 34 
QY5 N33 N7  N  0 1 Y N N N N N 14.491 22.026 10.198 -5.800 -1.940 0.257  N33  QY5 35 
QY5 N36 N8  N  0 1 Y N N N N N 16.653 22.350 9.780  -7.722 -2.873 -0.080 N36  QY5 36 
QY5 H1  H1  H  0 1 N N N N N N 10.014 19.743 6.679  -1.137 1.900  -1.515 H1   QY5 37 
QY5 H2  H2  H  0 1 N N N N N N 10.604 19.451 8.350  -1.290 0.181  -1.081 H2   QY5 38 
QY5 H3  H3  H  0 1 N N N N N N 8.440  19.833 9.277  0.101  2.323  0.591  H3   QY5 39 
QY5 H4  H4  H  0 1 N N N N N N 7.814  20.478 7.722  -0.051 0.603  1.025  H4   QY5 40 
QY5 H5  H5  H  0 1 N N N N N N 6.309  17.078 6.081  2.737  1.066  -2.697 H5   QY5 41 
QY5 H6  H6  H  0 1 N N N N N N 5.001  15.093 5.577  4.753  0.384  -3.928 H6   QY5 42 
QY5 H7  H7  H  0 1 N N N N N N 4.064  11.570 11.824 9.444  -0.590 1.874  H7   QY5 43 
QY5 H8  H8  H  0 1 N N N N N N 5.941  12.863 10.543 7.373  0.907  1.283  H8   QY5 44 
QY5 H9  H9  H  0 1 N N N N N N 0.919  14.711 10.069 7.855  -2.434 -2.567 H9   QY5 45 
QY5 H10 H10 H  0 1 N N N N N N 2.200  15.963 9.935  7.706  -3.725 -1.350 H10  QY5 46 
QY5 H11 H11 H  0 1 N N N N N N 1.810  14.923 8.524  6.285  -2.745 -1.787 H11  QY5 47 
QY5 H12 H12 H  0 1 N N N N N N 10.378 25.688 6.101  -3.529 5.140  1.315  H12  QY5 48 
QY5 H13 H13 H  0 1 N N N N N N 10.819 24.236 5.139  -4.549 4.869  -0.119 H13  QY5 49 
QY5 H14 H14 H  0 1 N N N N N N 9.091  24.626 5.435  -5.267 4.812  1.509  H14  QY5 50 
QY5 H15 H15 H  0 1 N N N N N N 11.149 23.864 7.554  -3.917 2.800  2.035  H15  QY5 51 
QY5 H16 H16 H  0 1 N N N N N N 9.421  24.254 7.850  -4.937 2.528  0.602  H16  QY5 52 
QY5 H17 H17 H  0 1 N N N N N N 9.278  22.350 10.207 -1.945 0.661  2.595  H17  QY5 53 
QY5 H18 H18 H  0 1 N N N N N N 17.320 20.791 11.149 -7.282 -3.655 -2.045 H18  QY5 54 
QY5 H19 H19 H  0 1 N N N N N N 14.789 20.399 11.668 -4.941 -2.532 -1.673 H19  QY5 55 
QY5 H20 H20 H  0 1 N N N N N N 16.021 24.376 8.263  -7.290 -2.478 2.880  H20  QY5 56 
QY5 H21 H21 H  0 1 N N N N N N 14.485 23.576 7.785  -7.018 -0.786 2.398  H21  QY5 57 
QY5 H22 H22 H  0 1 N N N N N N 14.526 24.660 9.217  -8.594 -1.556 2.094  H22  QY5 58 
QY5 H23 H23 H  0 1 N N N N N N 6.683  18.503 9.292  2.566  1.322  0.880  H23  QY5 59 
QY5 H24 H24 H  0 1 N N N N N N 10.631 22.903 12.164 -3.164 -1.147 3.729  H24  QY5 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
QY5 C19 C20 SING N N 1  
QY5 O21 C22 DOUB N N 2  
QY5 C10 C9  DOUB Y N 3  
QY5 C10 N11 SING Y N 4  
QY5 C9  C8  SING Y N 5  
QY5 O3  C4  DOUB N N 6  
QY5 C22 C20 SING N N 7  
QY5 C22 N23 SING N N 8  
QY5 BR2 C25 SING N N 9  
QY5 N11 C12 DOUB Y N 10 
QY5 C1  N23 SING N N 11 
QY5 C1  C2  SING N N 12 
QY5 C4  C2  SING N N 13 
QY5 C4  N5  SING N N 14 
QY5 N23 C26 SING N N 15 
QY5 C8  N5  SING N N 16 
QY5 C8  C7  DOUB Y N 17 
QY5 C34 C35 SING N N 18 
QY5 C12 C7  SING Y N 19 
QY5 C12 N15 SING N N 20 
QY5 C25 C26 DOUB Y N 21 
QY5 C25 C30 SING Y N 22 
QY5 C26 C27 SING Y N 23 
QY5 C7  BR1 SING N N 24 
QY5 C35 N36 DOUB Y N 25 
QY5 C35 N33 SING Y N 26 
QY5 C16 C17 SING N N 27 
QY5 N36 C31 SING Y N 28 
QY5 N15 C17 SING Y N 29 
QY5 N15 C14 SING Y N 30 
QY5 C17 N18 DOUB Y N 31 
QY5 C30 N33 SING N N 32 
QY5 C30 N29 DOUB Y N 33 
QY5 C27 C28 DOUB Y N 34 
QY5 N33 C32 SING Y N 35 
QY5 C14 C13 DOUB Y N 36 
QY5 C31 C32 DOUB Y N 37 
QY5 N18 C13 SING Y N 38 
QY5 C28 N29 SING Y N 39 
QY5 C1  H1  SING N N 40 
QY5 C1  H2  SING N N 41 
QY5 C2  H3  SING N N 42 
QY5 C2  H4  SING N N 43 
QY5 C9  H5  SING N N 44 
QY5 C10 H6  SING N N 45 
QY5 C13 H7  SING N N 46 
QY5 C14 H8  SING N N 47 
QY5 C16 H9  SING N N 48 
QY5 C16 H10 SING N N 49 
QY5 C16 H11 SING N N 50 
QY5 C19 H12 SING N N 51 
QY5 C19 H13 SING N N 52 
QY5 C19 H14 SING N N 53 
QY5 C20 H15 SING N N 54 
QY5 C20 H16 SING N N 55 
QY5 C27 H17 SING N N 56 
QY5 C31 H18 SING N N 57 
QY5 C32 H19 SING N N 58 
QY5 C34 H20 SING N N 59 
QY5 C34 H21 SING N N 60 
QY5 C34 H22 SING N N 61 
QY5 N5  H23 SING N N 62 
QY5 C28 H24 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
QY5 InChI            InChI                1.03  "InChI=1S/C24H24Br2N8O2/c1-4-20(36)34(18-6-9-30-24(22(18)26)33-14-11-28-16(33)3)12-7-19(35)31-17-5-8-29-23(21(17)25)32-13-10-27-15(32)2/h5-6,8-11,13-14H,4,7,12H2,1-3H3,(H,29,31,35)" 
QY5 InChIKey         InChI                1.03  RPENKOSSMVOBLX-UHFFFAOYSA-N                                                                                                                                                           
QY5 SMILES_CANONICAL CACTVS               3.385 "CCC(=O)N(CCC(=O)Nc1ccnc(n2ccnc2C)c1Br)c3ccnc(n4ccnc4C)c3Br"                                                                                                                          
QY5 SMILES           CACTVS               3.385 "CCC(=O)N(CCC(=O)Nc1ccnc(n2ccnc2C)c1Br)c3ccnc(n4ccnc4C)c3Br"                                                                                                                          
QY5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(CCC(=O)Nc1ccnc(c1Br)n2ccnc2C)c3ccnc(c3Br)n4ccnc4C"                                                                                                                          
QY5 SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)N(CCC(=O)Nc1ccnc(c1Br)n2ccnc2C)c3ccnc(c3Br)n4ccnc4C"                                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           QY5 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[3-bromanyl-2-(2-methylimidazol-1-yl)pyridin-4-yl]-3-[[3-bromanyl-2-(2-methylimidazol-1-yl)pyridin-4-yl]-propanoyl-amino]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
QY5 "Create component" 2020-08-20 PDBE 
QY5 "Initial release"  2021-10-13 RCSB 
QY5 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            QY5 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C19 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
