data_Q55
#

_chem_comp.id                                   Q55
_chem_comp.name                                 4S/3694
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H20 N6 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(3~{S})-3-(hydroxymethyl)-5-[2-[(2-methoxypyridin-3-yl)amino]pyrimidin-4-yl]-3-methyl-1,2-dihydroindole-7-carbonitrile"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-05-17
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       388.423
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Q55
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6Z1T
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q55  N    N1   N  0  1  N  N  N  33.413  12.404  -14.388   5.607  -0.138  -0.097  N    Q55   1  
Q55  C1   C1   C  0  1  Y  N  N  35.529  11.064  -17.170   2.543   2.045  -0.119  C1   Q55   2  
Q55  C2   C2   C  0  1  Y  N  N  36.721  11.659  -16.767   1.601   1.023  -0.095  C2   Q55   3  
Q55  O1   O1   O  0  1  N  N  N  43.800  12.796  -16.365  -4.901  -2.173  -0.694  O1   Q55   4  
Q55  C19  C3   C  0  1  N  N  N  45.160  13.106  -16.019  -5.934  -3.071  -1.104  C19  Q55   5  
Q55  C15  C4   C  0  1  Y  N  N  42.835  13.335  -15.626  -5.291  -0.989  -0.156  C15  Q55   6  
Q55  N4   N2   N  0  1  Y  N  N  43.140  13.859  -14.451  -6.578  -0.717  -0.035  N4   Q55   7  
Q55  C16  C5   C  0  1  Y  N  N  42.148  14.399  -13.727  -7.002   0.422   0.482  C16  Q55   8  
Q55  C17  C6   C  0  1  Y  N  N  40.833  14.430  -14.136  -6.108   1.380   0.918  C17  Q55   9  
Q55  C18  C7   C  0  1  Y  N  N  40.508  13.887  -15.357  -4.746   1.138   0.811  C18  Q55  10  
Q55  C14  C8   C  0  1  Y  N  N  41.515  13.320  -16.139  -4.330  -0.072   0.269  C14  Q55  11  
Q55  N3   N3   N  0  1  N  N  N  41.286  12.730  -17.385  -2.965  -0.363   0.145  N3   Q55  12  
Q55  C13  C9   C  0  1  Y  N  N  40.162  12.127  -17.865  -2.046   0.665   0.015  C13  Q55  13  
Q55  N1   N4   N  0  1  Y  N  N  40.265  11.554  -19.082  -2.484   1.910  -0.112  N1   Q55  14  
Q55  C12  C10  C  0  1  Y  N  N  39.154  10.981  -19.542  -1.638   2.920  -0.238  C12  Q55  15  
Q55  C11  C11  C  0  1  Y  N  N  37.960  10.945  -18.848  -0.278   2.668  -0.237  C11  Q55  16  
Q55  C10  C12  C  0  1  Y  N  N  37.954  11.531  -17.594   0.154   1.345  -0.102  C10  Q55  17  
Q55  C    C13  C  0  1  Y  N  N  34.363  11.239  -16.431   3.901   1.740  -0.116  C    Q55  18  
Q55  C20  C14  C  0  1  N  N  N  33.174  10.555  -16.869   4.872   2.792  -0.139  C20  Q55  19  
Q55  N5   N5   N  0  1  N  N  N  32.261   9.956  -17.221   5.642   3.627  -0.157  N5   Q55  20  
Q55  C5   C15  C  0  1  Y  N  N  34.390  12.053  -15.296   4.321   0.394  -0.090  C5   Q55  21  
Q55  C4   C16  C  0  1  Y  N  N  35.569  12.675  -14.907   3.363  -0.614  -0.060  C4   Q55  22  
Q55  C3   C17  C  0  1  Y  N  N  36.724  12.492  -15.638   2.022  -0.310  -0.065  C3   Q55  23  
Q55  C7   C18  C  0  1  N  N  S  35.352  13.480  -13.646   4.089  -1.945  -0.024  C7   Q55  24  
Q55  C8   C19  C  0  1  N  N  N  36.009  14.861  -13.740   4.077  -2.607  -1.403  C8   Q55  25  
Q55  C9   C20  C  0  1  N  N  N  35.924  12.702  -12.483   3.476  -2.870   1.029  C9   Q55  26  
Q55  O    O2   O  0  1  N  N  N  35.975  13.504  -11.307   4.180  -4.113   1.040  O    Q55  27  
Q55  C6   C21  C  0  1  N  N  N  33.820  13.576  -13.604   5.526  -1.537   0.375  C6   Q55  28  
Q55  N2   N6   N  0  1  Y  N  N  39.049  12.143  -17.117  -0.754   0.380   0.026  N2   Q55  29  
Q55  H2   H1   H  0  1  N  N  N  32.570  12.617  -14.881   6.013  -0.090  -1.020  H2   Q55  30  
Q55  H    H2   H  0  1  N  N  N  35.509  10.460  -18.065   2.221   3.076  -0.141  H    Q55  31  
Q55  H17  H3   H  0  1  N  N  N  45.842  12.593  -16.713  -6.553  -3.329  -0.244  H17  Q55  32  
Q55  H19  H4   H  0  1  N  N  N  45.317  14.193  -16.088  -6.550  -2.593  -1.865  H19  Q55  33  
Q55  H18  H5   H  0  1  N  N  N  45.362  12.770  -14.991  -5.486  -3.976  -1.514  H18  Q55  34  
Q55  H14  H6   H  0  1  N  N  N  42.394  14.834  -12.770  -8.063   0.607   0.564  H14  Q55  35  
Q55  H15  H7   H  0  1  N  N  N  40.072  14.872  -13.510  -6.466   2.308   1.339  H15  Q55  36  
Q55  H16  H8   H  0  1  N  N  N  39.486  13.899  -15.706  -4.027   1.871   1.145  H16  Q55  37  
Q55  H13  H9   H  0  1  N  N  N  42.061  12.754  -18.017  -2.664  -1.285   0.151  H13  Q55  38  
Q55  H12  H10  H  0  1  N  N  N  39.189  10.516  -20.516  -2.005   3.930  -0.341  H12  Q55  39  
Q55  H11  H11  H  0  1  N  N  N  37.076  10.483  -19.263   0.434   3.474  -0.339  H11  Q55  40  
Q55  H1   H12  H  0  1  N  N  N  37.634  12.992  -15.340   1.290  -1.104  -0.045  H1   Q55  41  
Q55  H7   H13  H  0  1  N  N  N  35.831  15.417  -12.807   4.572  -1.956  -2.124  H7   Q55  42  
Q55  H6   H14  H  0  1  N  N  N  37.092  14.742  -13.895   4.603  -3.560  -1.353  H6   Q55  43  
Q55  H5   H15  H  0  1  N  N  N  35.576  15.416  -14.586   3.046  -2.778  -1.715  H5   Q55  44  
Q55  H8   H16  H  0  1  N  N  N  35.290  11.823  -12.292   3.550  -2.402   2.011  H8   Q55  45  
Q55  H9   H17  H  0  1  N  N  N  36.942  12.372  -12.737   2.427  -3.048   0.790  H9   Q55  46  
Q55  H10  H18  H  0  1  N  N  N  36.337  12.995  -10.591   3.843  -4.750   1.685  H10  Q55  47  
Q55  H4   H19  H  0  1  N  N  N  33.466  14.508  -14.068   6.261  -2.160  -0.135  H4   Q55  48  
Q55  H3   H20  H  0  1  N  N  N  33.445  13.515  -12.572   5.657  -1.589   1.456  H3   Q55  49  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q55  C12  N1   DOUB  Y  N   1  
Q55  C12  C11  SING  Y  N   2  
Q55  N1   C13  SING  Y  N   3  
Q55  C11  C10  DOUB  Y  N   4  
Q55  C13  N3   SING  N  N   5  
Q55  C13  N2   DOUB  Y  N   6  
Q55  C10  N2   SING  Y  N   7  
Q55  C10  C2   SING  N  N   8  
Q55  N3   C14  SING  N  N   9  
Q55  N5   C20  TRIP  N  N  10  
Q55  C1   C2   DOUB  Y  N  11  
Q55  C1   C    SING  Y  N  12  
Q55  C20  C    SING  N  N  13  
Q55  C2   C3   SING  Y  N  14  
Q55  C    C5   DOUB  Y  N  15  
Q55  O1   C19  SING  N  N  16  
Q55  O1   C15  SING  N  N  17  
Q55  C14  C15  DOUB  Y  N  18  
Q55  C14  C18  SING  Y  N  19  
Q55  C3   C4   DOUB  Y  N  20  
Q55  C15  N4   SING  Y  N  21  
Q55  C18  C17  DOUB  Y  N  22  
Q55  C5   C4   SING  Y  N  23  
Q55  C5   N    SING  N  N  24  
Q55  C4   C7   SING  N  N  25  
Q55  N4   C16  DOUB  Y  N  26  
Q55  N    C6   SING  N  N  27  
Q55  C17  C16  SING  Y  N  28  
Q55  C8   C7   SING  N  N  29  
Q55  C7   C6   SING  N  N  30  
Q55  C7   C9   SING  N  N  31  
Q55  C9   O    SING  N  N  32  
Q55  N    H2   SING  N  N  33  
Q55  C1   H    SING  N  N  34  
Q55  C19  H17  SING  N  N  35  
Q55  C19  H19  SING  N  N  36  
Q55  C19  H18  SING  N  N  37  
Q55  C16  H14  SING  N  N  38  
Q55  C17  H15  SING  N  N  39  
Q55  C18  H16  SING  N  N  40  
Q55  N3   H13  SING  N  N  41  
Q55  C12  H12  SING  N  N  42  
Q55  C11  H11  SING  N  N  43  
Q55  C3   H1   SING  N  N  44  
Q55  C8   H7   SING  N  N  45  
Q55  C8   H6   SING  N  N  46  
Q55  C8   H5   SING  N  N  47  
Q55  C9   H8   SING  N  N  48  
Q55  C9   H9   SING  N  N  49  
Q55  O    H10  SING  N  N  50  
Q55  C6   H4   SING  N  N  51  
Q55  C6   H3   SING  N  N  52  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q55  InChI             InChI                 1.03   "InChI=1S/C21H20N6O2/c1-21(12-28)11-25-18-14(10-22)8-13(9-15(18)21)16-5-7-24-20(26-16)27-17-4-3-6-23-19(17)29-2/h3-9,25,28H,11-12H2,1-2H3,(H,24,26,27)/t21-/m0/s1"  
Q55  InChIKey          InChI                 1.03   PTVSCHCHSJTBBB-NRFANRHFSA-N  
Q55  SMILES_CANONICAL  CACTVS                3.385  "COc1ncccc1Nc2nccc(n2)c3cc(C#N)c4NC[C@@](C)(CO)c4c3"  
Q55  SMILES            CACTVS                3.385  "COc1ncccc1Nc2nccc(n2)c3cc(C#N)c4NC[C](C)(CO)c4c3"  
Q55  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@]1(CNc2c1cc(cc2C#N)c3ccnc(n3)Nc4cccnc4OC)CO"  
Q55  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(CNc2c1cc(cc2C#N)c3ccnc(n3)Nc4cccnc4OC)CO"  
#
_pdbx_chem_comp_identifier.comp_id          Q55
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(3~{S})-3-(hydroxymethyl)-5-[2-[(2-methoxypyridin-3-yl)amino]pyrimidin-4-yl]-3-methyl-1,2-dihydroindole-7-carbonitrile"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q55  "Create component"  2020-05-17  PDBE  
Q55  "Initial release"   2020-07-08  RCSB  
Q55  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     Q55
_pdbx_chem_comp_synonyms.name        "(3~{S})-3-(hydroxymethyl)-5-[2-[(2-methoxypyridin-3-yl)amino]pyrimidin-4-yl]-3-methyl-1,2-dihydroindole-7-carbonitrile"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
