data_ND5
#

_chem_comp.id                                   ND5
_chem_comp.name                                 "3-[(~{E})-[3,5-bis(bromanyl)-2-oxidanyl-phenyl]methylideneamino]oxypropanoic acid"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H9 Br2 N O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-11-22
_chem_comp.pdbx_modified_date                   2020-10-16
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       366.991
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    ND5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6TI9
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ND5  C01   C1   C   0  1  Y  N  N   0.180   1.222   8.053  -0.350  -0.547   0.003  C01   ND5   1  
ND5  C02   C2   C   0  1  Y  N  N  -0.086   0.136   7.234  -0.261   0.851   0.001  C02   ND5   2  
ND5  C03   C3   C   0  1  Y  N  N  -0.221  -1.098   7.799  -1.428   1.618   0.000  C03   ND5   3  
ND5  C04   C4   C   0  1  Y  N  N  -0.094  -1.240   9.155  -2.659   0.996   0.001  C04   ND5   4  
ND5  C05   C5   C   0  1  Y  N  N   0.176  -0.158   9.986  -2.743  -0.387   0.002  C05   ND5   5  
ND5  C06   C6   C   0  1  Y  N  N   0.322   1.104   9.427  -1.595  -1.156   0.004  C06   ND5   6  
ND5  C09   C7   C   0  1  N  N  N  -0.236   0.216   5.715   1.059   1.510   0.001  C09   ND5   7  
ND5  C13   C8   C   0  1  N  N  N  -1.677  -1.903   3.375   4.508   0.521   0.003  C13   ND5   8  
ND5  C14   C9   C   0  1  N  N  N  -3.069  -1.362   3.067   5.819   1.310   0.002  C14   ND5   9  
ND5  C15   C10  C   0  1  N  N  N  -3.418  -1.563   1.597   6.982   0.352   0.004  C15   ND5  10  
ND5  N11   N1   N   0  1  N  N  N  -0.679  -0.795   5.115   2.138   0.796   0.002  N11   ND5  11  
ND5  O07   O1   O   0  1  N  N  N   0.325   2.461   7.467   0.779  -1.302  -0.002  O07   ND5  12  
ND5  O12   O2   O   0  1  N  N  N  -0.842  -0.833   3.722   3.405   1.429   0.002  O12   ND5  13  
ND5  O16   O3   O   0  1  N  N  N  -2.513  -1.536   0.722   6.784  -0.840   0.005  O16   ND5  14  
ND5  O17   O4   O   0  1  N  N  N  -4.617  -1.748   1.260   8.239   0.823   0.004  O17   ND5  15  
ND5  BR1   BR1  BR  0  0  N  N  N  -0.313  -3.036   9.816  -4.239   2.035  -0.000  BR10  ND5  16  
ND5  BR8   BR2  BR  0  0  N  N  N   0.705   2.684  10.520  -1.722  -3.043   0.006  BR8   ND5  17  
ND5  H03   H1   H   0  1  N  N  N  -0.427  -1.959   7.180  -1.366   2.696  -0.001  H03   ND5  18  
ND5  H05   H2   H   0  1  N  N  N   0.271  -0.298  11.053  -3.711  -0.866   0.003  H05   ND5  19  
ND5  H09   H3   H   0  1  N  N  N   0.030   1.113   5.175   1.124   2.588  -0.000  H09   ND5  20  
ND5  H131  H4   H   0  0  N  N  N  -1.734  -2.614   4.212   4.463  -0.108  -0.887  H131  ND5  21  
ND5  H132  H5   H   0  0  N  N  N  -1.274  -2.413   2.488   4.462  -0.106   0.893  H132  ND5  22  
ND5  H142  H6   H   0  0  N  N  N  -3.097  -0.287   3.300   5.865   1.937  -0.888  H142  ND5  23  
ND5  H141  H7   H   0  0  N  N  N  -3.807  -1.892   3.688   5.865   1.938   0.892  H141  ND5  24  
ND5  HO07  H8   H   0  0  N  N  N   0.503   3.110   8.138   1.104  -1.518  -0.886  HO07  ND5  25  
ND5  H1    H9   H   0  1  N  N  N  -4.669  -1.849   0.317   8.953   0.170   0.004  H1    ND5  26  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ND5  O16  C15   DOUB  N  N   1  
ND5  O17  C15   SING  N  N   2  
ND5  C15  C14   SING  N  N   3  
ND5  C14  C13   SING  N  N   4  
ND5  C13  O12   SING  N  N   5  
ND5  O12  N11   SING  N  N   6  
ND5  N11  C09   DOUB  N  E   7  
ND5  C09  C02   SING  N  N   8  
ND5  C02  C03   DOUB  Y  N   9  
ND5  C02  C01   SING  Y  N  10  
ND5  O07  C01   SING  N  N  11  
ND5  C03  C04   SING  Y  N  12  
ND5  C01  C06   DOUB  Y  N  13  
ND5  C04  BR1   SING  N  N  14  
ND5  C04  C05   DOUB  Y  N  15  
ND5  C06  C05   SING  Y  N  16  
ND5  C06  BR8   SING  N  N  17  
ND5  C03  H03   SING  N  N  18  
ND5  C05  H05   SING  N  N  19  
ND5  C09  H09   SING  N  N  20  
ND5  C13  H131  SING  N  N  21  
ND5  C13  H132  SING  N  N  22  
ND5  C14  H142  SING  N  N  23  
ND5  C14  H141  SING  N  N  24  
ND5  O07  HO07  SING  N  N  25  
ND5  O17  H1    SING  N  N  26  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ND5  InChI             InChI                 1.03   "InChI=1S/C10H9Br2NO4/c11-7-3-6(10(16)8(12)4-7)5-13-17-2-1-9(14)15/h3-5,16H,1-2H2,(H,14,15)/b13-5+"  
ND5  InChIKey          InChI                 1.03   VPPGEQCITQLSNE-WLRTZDKTSA-N  
ND5  SMILES_CANONICAL  CACTVS                3.385  "OC(=O)CCO\N=C\c1cc(Br)cc(Br)c1O"  
ND5  SMILES            CACTVS                3.385  "OC(=O)CCON=Cc1cc(Br)cc(Br)c1O"  
ND5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1c(cc(c(c1/C=N/OCCC(=O)O)O)Br)Br"  
ND5  SMILES            "OpenEye OEToolkits"  2.0.7  "c1c(cc(c(c1C=NOCCC(=O)O)O)Br)Br"  
#
_pdbx_chem_comp_identifier.comp_id          ND5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "3-[(~{E})-[3,5-bis(bromanyl)-2-oxidanyl-phenyl]methylideneamino]oxypropanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ND5  "Create component"  2019-11-22  PDBE  
ND5  "Initial release"   2020-10-21  RCSB  
##
