data_KG5
#

_chem_comp.id                                   KG5
_chem_comp.name                                 "(2~{R},3~{R},4~{R},5~{S})-1-[5-[[4-(3,4-dihydro-2~{H}-1,5-benzodioxepin-7-yl)phenyl]methoxy]pentyl]-2-(hydroxymethyl)piperidine-3,4,5-triol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H37 N O7"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-21
_chem_comp.pdbx_modified_date                   2020-07-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       487.585
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    KG5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6RRW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KG5  C3   C1    C  0  1  N  N  R  46.528  -13.811   -8.314    9.200   0.752   0.624  C3   KG5   1  
KG5  C5   C2    C  0  1  N  N  S  47.413  -12.813   -6.237    7.695   2.200  -0.744  C5   KG5   2  
KG5  C7   C3    C  0  1  N  N  N  50.093  -15.136   -7.550    5.962  -1.062  -0.010  C7   KG5   3  
KG5  C11  C4    C  0  1  N  N  N  52.040  -17.568   -6.282    1.139  -2.322  -0.353  C11  KG5   4  
KG5  C8   C5    C  0  1  N  N  N  51.325  -14.617   -6.797    4.529  -0.526  -0.024  C8   KG5   5  
KG5  C10  C6    C  0  1  N  N  N  52.607  -16.767   -7.432    2.117  -1.157  -0.196  C10  KG5   6  
KG5  O1   O1    O  0  1  N  N  N  49.097  -13.905  -10.144    7.953  -0.736   2.702  O1   KG5   7  
KG5  C1   C7    C  0  1  N  N  N  48.214  -14.931   -9.797    8.312  -1.414   1.496  C1   KG5   8  
KG5  C2   C8    C  0  1  N  N  R  47.770  -14.716   -8.359    8.274  -0.429   0.326  C2   KG5   9  
KG5  O2   O2    O  0  1  N  N  N  45.442  -14.517   -8.909   10.539   0.282   0.785  O2   KG5  10  
KG5  C4   C9    C  0  1  N  N  R  46.164  -13.410   -6.893    9.144   1.745  -0.540  C4   KG5  11  
KG5  O3   O3    O  0  1  N  N  N  45.044  -12.514   -6.911    9.962   2.878  -0.242  O3   KG5  12  
KG5  O4   O4    O  0  1  N  N  N  47.150  -12.268   -4.941    7.626   3.083  -1.865  O4   KG5  13  
KG5  C6   C10   C  0  1  N  N  N  48.509  -13.864   -6.173    6.813   0.976  -1.002  C6   KG5  14  
KG5  N1   N1    N  0  1  N  N  N  48.923  -14.226   -7.539    6.901   0.058   0.140  N1   KG5  15  
KG5  C9   C11   C  0  1  N  N  N  52.647  -15.270   -7.184    3.550  -1.692  -0.182  C9   KG5  16  
KG5  O5   O5    O  0  1  N  N  N  52.332  -18.937   -6.509   -0.200  -1.822  -0.366  O5   KG5  17  
KG5  H1   H1    H  0  1  N  N  N  46.742  -12.899   -8.891    8.875   1.247   1.540  H1   KG5  18  
KG5  H2   H2    H  0  1  N  N  N  47.770  -12.004   -6.891    7.347   2.717   0.150  H2   KG5  19  
KG5  H3   H3    H  0  1  N  N  N  49.789  -16.088   -7.091    6.083  -1.753   0.824  H3   KG5  20  
KG5  H5   H5    H  0  1  N  N  N  52.500  -17.241   -5.338    1.341  -2.843  -1.289  H5   KG5  21  
KG5  H7   H7    H  0  1  N  N  N  51.410  -13.537   -6.988    4.326  -0.005   0.911  H7   KG5  22  
KG5  H9   H9    H  0  1  N  N  N  51.987  -16.953   -8.322    1.996  -0.465  -1.030  H9   KG5  23  
KG5  H18  H18   H  0  1  N  N  N  47.952  -11.912   -4.578    6.735   3.409  -2.054  H18  KG5  24  
KG5  H19  H19   H  0  1  N  N  N  48.130  -14.758   -5.656    5.779   1.295  -1.133  H19  KG5  25  
KG5  H20  H20   H  0  1  N  N  N  49.372  -13.461   -5.623    7.154   0.467  -1.904  H20  KG5  26  
KG5  H22  H22   H  0  1  N  N  N  53.364  -15.083   -6.371    3.753  -2.213  -1.117  H22  KG5  27  
KG5  H23  H23   H  0  1  N  N  N  53.003  -14.786   -8.106    3.672  -2.383   0.652  H23  KG5  28  
KG5  C13  C13   C  0  1  Y  N  N       ?        ?        ?   -2.563  -2.199  -0.511  C13  KG5  29  
KG5  C12  C12   C  0  1  N  N  N       ?        ?        ?   -1.197  -2.835  -0.509  C12  KG5  30  
KG5  C14  C14   C  0  1  Y  N  N       ?        ?        ?   -3.133  -1.793  -1.704  C14  KG5  31  
KG5  C15  C15   C  0  1  Y  N  N       ?        ?        ?   -4.384  -1.209  -1.711  C15  KG5  32  
KG5  C17  C17   C  0  1  Y  N  N       ?        ?        ?   -4.496  -1.445   0.685  C17  KG5  33  
KG5  C18  C18   C  0  1  Y  N  N       ?        ?        ?   -3.245  -2.027   0.681  C18  KG5  34  
KG5  C20  C20   C  0  1  Y  N  N       ?        ?        ?   -8.246   0.591  -1.718  C20  KG5  35  
KG5  C21  C21   C  0  1  Y  N  N       ?        ?        ?   -6.994   0.008  -1.715  C21  KG5  36  
KG5  C23  C23   C  0  1  Y  N  N       ?        ?        ?   -7.105  -0.223   0.686  C23  KG5  37  
KG5  C24  C24   C  0  1  Y  N  N       ?        ?        ?   -8.353   0.371   0.676  C24  KG5  38  
KG5  C25  C25   C  0  1  Y  N  N       ?        ?        ?   -8.926   0.773  -0.524  C25  KG5  39  
KG5  C19  C19   C  0  1  Y  N  N       ?        ?        ?   -6.417  -0.402  -0.515  C19  KG5  40  
KG5  C16  C266  C  0  1  Y  N  N       ?        ?        ?   -5.073  -1.029  -0.513  C16  KG5  41  
KG5  O6   O6    O  0  1  N  N  N       ?        ?        ?  -10.163   1.348  -0.520  O6   KG5  42  
KG5  O7   O7    O  0  1  N  N  N       ?        ?        ?   -9.035   0.555   1.844  O7   KG5  43  
KG5  C26  C26   C  0  1  N  N  N       ?        ?        ?  -10.249   2.644   0.077  C26  KG5  44  
KG5  C27  C27   C  0  1  N  N  N       ?        ?        ?  -10.420   2.533   1.584  C27  KG5  45  
KG5  C28  C28   C  0  1  N  N  N       ?        ?        ?   -9.207   1.912   2.260  C28  KG5  46  
KG5  H4   H4    H  0  1  N  N  N  50.381  -15.309   -8.597    6.165  -1.583  -0.946  H4   KG5  47  
KG5  H6   H6    H  0  1  N  N  N  50.951  -17.423   -6.229    1.260  -3.013   0.481  H6   KG5  48  
KG5  H8   H8    H  0  1  N  N  N  51.163  -14.787   -5.722    4.407   0.165  -0.859  H8   KG5  49  
KG5  H10  H10   H  0  1  N  N  N  53.634  -17.113   -7.621    1.914  -0.636   0.740  H10  KG5  50  
KG5  H11  H11   H  0  1  N  N  N  49.385  -14.024  -11.041    7.955  -1.301   3.487  H11  KG5  51  
KG5  H12  H12   H  0  1  N  N  N  47.339  -14.909  -10.463    9.318  -1.822   1.595  H12  KG5  52  
KG5  H13  H13   H  0  1  N  N  N  48.720  -15.903   -9.888    7.607  -2.225   1.312  H13  KG5  53  
KG5  H14  H14   H  0  1  N  N  N  47.471  -15.696   -7.959    8.607  -0.931  -0.582  H14  KG5  54  
KG5  H15  H15   H  0  1  N  N  N  44.663  -13.974   -8.891   11.182   0.979   0.974  H15  KG5  55  
KG5  H16  H16   H  0  1  N  N  N  45.892  -14.321   -6.339    9.505   1.262  -1.448  H16  KG5  56  
KG5  H17  H17   H  0  1  N  N  N  44.821  -12.267   -6.021    9.973   3.549  -0.938  H17  KG5  57  
KG5  H21  H21   H  0  1  N  N  N       ?        ?        ?   -1.043  -3.367  -1.448  H21  KG5  58  
KG5  H24  H24   H  0  1  N  N  N       ?        ?        ?   -1.125  -3.537   0.322  H24  KG5  59  
KG5  H25  H25   H  0  1  N  N  N       ?        ?        ?   -2.598  -1.933  -2.632  H25  KG5  60  
KG5  H26  H26   H  0  1  N  N  N       ?        ?        ?   -4.828  -0.892  -2.643  H26  KG5  61  
KG5  H27  H27   H  0  1  N  N  N       ?        ?        ?   -5.028  -1.312   1.616  H27  KG5  62  
KG5  H28  H28   H  0  1  N  N  N       ?        ?        ?   -2.797  -2.350   1.609  H28  KG5  63  
KG5  H29  H29   H  0  1  N  N  N       ?        ?        ?   -8.693   0.908  -2.648  H29  KG5  64  
KG5  H30  H30   H  0  1  N  N  N       ?        ?        ?   -6.462  -0.131  -2.644  H30  KG5  65  
KG5  H31  H31   H  0  1  N  N  N       ?        ?        ?   -6.660  -0.535   1.619  H31  KG5  66  
KG5  H32  H32   H  0  1  N  N  N       ?        ?        ?   -9.337   3.200  -0.141  H32  KG5  67  
KG5  H33  H33   H  0  1  N  N  N       ?        ?        ?  -11.102   3.176  -0.343  H33  KG5  68  
KG5  H34  H34   H  0  1  N  N  N       ?        ?        ?  -10.581   3.530   1.995  H34  KG5  69  
KG5  H35  H35   H  0  1  N  N  N       ?        ?        ?  -11.295   1.920   1.796  H35  KG5  70  
KG5  H36  H36   H  0  1  N  N  N       ?        ?        ?   -9.345   1.941   3.341  H36  KG5  71  
KG5  H37  H37   H  0  1  N  N  N       ?        ?        ?   -8.317   2.483   1.996  H37  KG5  72  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KG5  O1   C1   SING  N  N   1  
KG5  C1   C2   SING  N  N   2  
KG5  O2   C3   SING  N  N   3  
KG5  C2   C3   SING  N  N   4  
KG5  C2   N1   SING  N  N   5  
KG5  C3   C4   SING  N  N   6  
KG5  C7   N1   SING  N  N   7  
KG5  C7   C8   SING  N  N   8  
KG5  N1   C6   SING  N  N   9  
KG5  C10  C9   SING  N  N  10  
KG5  C10  C11  SING  N  N  11  
KG5  C9   C8   SING  N  N  12  
KG5  O3   C4   SING  N  N  13  
KG5  C4   C5   SING  N  N  14  
KG5  O5   C11  SING  N  N  15  
KG5  C5   C6   SING  N  N  16  
KG5  C5   O4   SING  N  N  17  
KG5  C3   H1   SING  N  N  18  
KG5  C5   H2   SING  N  N  19  
KG5  C7   H3   SING  N  N  20  
KG5  C11  H5   SING  N  N  21  
KG5  C8   H7   SING  N  N  22  
KG5  C10  H9   SING  N  N  23  
KG5  O4   H18  SING  N  N  24  
KG5  C6   H19  SING  N  N  25  
KG5  C6   H20  SING  N  N  26  
KG5  C9   H22  SING  N  N  27  
KG5  C9   H23  SING  N  N  28  
KG5  O5   C12  SING  N  N  29  
KG5  C13  C12  SING  N  N  30  
KG5  C13  C14  SING  Y  N  31  
KG5  C14  C15  DOUB  Y  N  32  
KG5  C15  C16  SING  Y  N  33  
KG5  C16  C17  DOUB  Y  N  34  
KG5  C17  C18  SING  Y  N  35  
KG5  C18  C13  DOUB  Y  N  36  
KG5  C20  C21  SING  Y  N  37  
KG5  C21  C19  DOUB  Y  N  38  
KG5  C19  C23  SING  Y  N  39  
KG5  C23  C24  DOUB  Y  N  40  
KG5  C24  C25  SING  Y  N  41  
KG5  C25  C20  DOUB  Y  N  42  
KG5  C19  C16  SING  N  N  43  
KG5  O7   C24  SING  N  N  44  
KG5  O6   C25  SING  N  N  45  
KG5  C26  C27  SING  N  N  46  
KG5  C27  C28  SING  N  N  47  
KG5  C26  O6   SING  N  N  48  
KG5  O7   C28  SING  N  N  49  
KG5  C7   H4   SING  N  N  50  
KG5  C11  H6   SING  N  N  51  
KG5  C8   H8   SING  N  N  52  
KG5  C10  H10  SING  N  N  53  
KG5  O1   H11  SING  N  N  54  
KG5  C1   H12  SING  N  N  55  
KG5  C1   H13  SING  N  N  56  
KG5  C2   H14  SING  N  N  57  
KG5  O2   H15  SING  N  N  58  
KG5  C4   H16  SING  N  N  59  
KG5  O3   H17  SING  N  N  60  
KG5  C12  H21  SING  N  N  61  
KG5  C12  H24  SING  N  N  62  
KG5  C14  H25  SING  N  N  63  
KG5  C15  H26  SING  N  N  64  
KG5  C17  H27  SING  N  N  65  
KG5  C18  H28  SING  N  N  66  
KG5  C20  H29  SING  N  N  67  
KG5  C21  H30  SING  N  N  68  
KG5  C23  H31  SING  N  N  69  
KG5  C26  H32  SING  N  N  70  
KG5  C26  H33  SING  N  N  71  
KG5  C27  H34  SING  N  N  72  
KG5  C27  H35  SING  N  N  73  
KG5  C28  H36  SING  N  N  74  
KG5  C28  H37  SING  N  N  75  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KG5  InChI             InChI                 1.03   "InChI=1S/C27H37NO7/c29-17-22-26(31)27(32)23(30)16-28(22)11-2-1-3-12-33-18-19-5-7-20(8-6-19)21-9-10-24-25(15-21)35-14-4-13-34-24/h5-10,15,22-23,26-27,29-32H,1-4,11-14,16-18H2/t22-,23+,26-,27-/m1/s1"  
KG5  InChIKey          InChI                 1.03   FGUXCOMLHUOVQN-QGNCETNGSA-N  
KG5  SMILES_CANONICAL  CACTVS                3.385  "OC[C@@H]1[C@@H](O)[C@H](O)[C@@H](O)CN1CCCCCOCc2ccc(cc2)c3ccc4OCCCOc4c3"  
KG5  SMILES            CACTVS                3.385  "OC[CH]1[CH](O)[CH](O)[CH](O)CN1CCCCCOCc2ccc(cc2)c3ccc4OCCCOc4c3"  
KG5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1COCCCCCN2C[C@@H]([C@H]([C@@H]([C@H]2CO)O)O)O)c3ccc4c(c3)OCCCO4"  
KG5  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(ccc1COCCCCCN2CC(C(C(C2CO)O)O)O)c3ccc4c(c3)OCCCO4"  
#
_pdbx_chem_comp_identifier.comp_id          KG5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(2~{R},3~{R},4~{R},5~{S})-1-[5-[[4-(3,4-dihydro-2~{H}-1,5-benzodioxepin-7-yl)phenyl]methoxy]pentyl]-2-(hydroxymethyl)piperidine-3,4,5-triol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KG5  "Create component"  2019-05-21  PDBE  
KG5  "Initial release"   2020-07-08  RCSB  
##
