data_HX5
# 
_chem_comp.id                                    HX5 
_chem_comp.name                                  "4,6-dichloro-2-(methylsulfanyl)pyrimidine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H4 Cl2 N2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-02-06 
_chem_comp.pdbx_modified_date                    2018-12-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        195.070 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HX5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5Z9N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HX5 C1  C1  C  0 1 Y N N -37.190 -5.886 -21.149 1.371  0.816  -0.002 C1   HX5 1  
HX5 C2  C2  C  0 1 Y N N -36.389 -4.981 -20.506 1.496  -0.565 -0.000 C2   HX5 2  
HX5 N3  N1  N  0 1 Y N N -35.068 -4.903 -20.602 0.403  -1.313 0.000  N3   HX5 3  
HX5 C4  C3  C  0 1 Y N N -34.510 -5.846 -21.369 -0.799 -0.755 -0.000 C4   HX5 4  
HX5 N5  N2  N  0 1 Y N N -35.154 -6.808 -22.041 -0.954 0.561  -0.002 N5   HX5 5  
HX5 C6  C4  C  0 1 Y N N -36.473 -6.799 -21.879 0.097  1.366  0.003  C6   HX5 6  
HX5 S7  S1  S  0 1 N N N -32.768 -6.029 -21.463 -2.226 -1.788 0.001  S7   HX5 7  
HX5 C8  C5  C  0 1 N N N -32.174 -4.780 -20.328 -3.526 -0.529 -0.001 C8   HX5 8  
HX5 CL9 CL1 CL 0 0 N N N -37.318 -8.175 -22.519 -0.115 3.089  0.000  CL9  HX5 9  
HX5 CL1 CL2 CL 0 0 N N N -37.109 -3.964 -19.300 3.067  -1.305 0.000  CL10 HX5 10 
HX5 H1  H1  H  0 1 N N N -38.268 -5.881 -21.088 2.246  1.450  -0.002 H1   HX5 11 
HX5 H2  H2  H  0 1 N N N -31.074 -4.800 -20.302 -3.430 0.094  0.888  H2   HX5 12 
HX5 H3  H3  H  0 1 N N N -32.515 -3.789 -20.662 -3.430 0.092  -0.892 H3   HX5 13 
HX5 H4  H4  H  0 1 N N N -32.568 -4.983 -19.321 -4.502 -1.014 -0.000 H4   HX5 14 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HX5 CL9 C6  SING N N 1  
HX5 N5  C6  DOUB Y N 2  
HX5 N5  C4  SING Y N 3  
HX5 C6  C1  SING Y N 4  
HX5 S7  C4  SING N N 5  
HX5 S7  C8  SING N N 6  
HX5 C4  N3  DOUB Y N 7  
HX5 C1  C2  DOUB Y N 8  
HX5 N3  C2  SING Y N 9  
HX5 C2  CL1 SING N N 10 
HX5 C1  H1  SING N N 11 
HX5 C8  H2  SING N N 12 
HX5 C8  H3  SING N N 13 
HX5 C8  H4  SING N N 14 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HX5 SMILES           ACDLabs              12.01 "c1c(Cl)nc(nc1Cl)SC"                                  
HX5 InChI            InChI                1.03  "InChI=1S/C5H4Cl2N2S/c1-10-5-8-3(6)2-4(7)9-5/h2H,1H3" 
HX5 InChIKey         InChI                1.03  FCMLONIWOAGZJX-UHFFFAOYSA-N                           
HX5 SMILES_CANONICAL CACTVS               3.385 "CSc1nc(Cl)cc(Cl)n1"                                  
HX5 SMILES           CACTVS               3.385 "CSc1nc(Cl)cc(Cl)n1"                                  
HX5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CSc1nc(cc(n1)Cl)Cl"                                  
HX5 SMILES           "OpenEye OEToolkits" 2.0.6 "CSc1nc(cc(n1)Cl)Cl"                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
HX5 "SYSTEMATIC NAME" ACDLabs              12.01 "4,6-dichloro-2-(methylsulfanyl)pyrimidine"      
HX5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4,6-bis(chloranyl)-2-methylsulfanyl-pyrimidine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HX5 "Create component" 2018-02-06 RCSB 
HX5 "Initial release"  2018-12-12 RCSB 
# 
