data_9M5
# 
_chem_comp.id                                    9M5 
_chem_comp.name                                  "~{N}-(4-~{tert}-butylphenyl)-~{N}-[(1~{S})-2-(cyclohexylamino)-2-oxidanylidene-1-pyridin-3-yl-ethyl]-1~{H}-imidazole-4-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H33 N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-11-19 
_chem_comp.pdbx_modified_date                    2024-04-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        459.583 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9M5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QAI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9M5 C02  C1  C 0 1 N N N N N N 21.913 6.120  -24.742 -0.048 -2.560 0.045  C02  9M5 1  
9M5 C04  C2  C 0 1 N N S N N N 20.594 5.047  -26.503 0.535  -0.424 -0.972 C04  9M5 2  
9M5 C05  C3  C 0 1 N N N N N N 20.650 4.763  -28.020 1.663  -0.082 -0.034 C05  9M5 3  
9M5 C07  C4  C 0 1 N N N N N N 22.617 4.067  -29.390 3.758  1.056  0.467  C07  9M5 4  
9M5 C08  C5  C 0 1 N N N N N N 23.297 2.744  -29.674 5.004  1.418  -0.344 C08  9M5 5  
9M5 C09  C6  C 0 1 N N N N N N 23.333 2.408  -31.162 6.150  1.765  0.609  C09  9M5 6  
9M5 C10  C7  C 0 1 N N N N N N 23.921 3.537  -31.970 5.745  2.955  1.481  C10  9M5 7  
9M5 C11  C8  C 0 1 N N N N N N 23.187 4.836  -31.721 4.499  2.594  2.292  C11  9M5 8  
9M5 C12  C9  C 0 1 N N N N N N 22.092 4.700  -30.660 3.353  2.247  1.339  C12  9M5 9  
9M5 C14  C10 C 0 1 Y N N N N N 19.172 5.304  -26.020 -0.169 0.840  -1.394 C14  9M5 10 
9M5 C15  C11 C 0 1 Y N N N N N 18.677 6.523  -25.595 -0.173 1.231  -2.724 C15  9M5 11 
9M5 C16  C12 C 0 1 Y N N N N N 17.380 6.637  -25.168 -0.834 2.401  -3.066 C16  9M5 12 
9M5 C17  C13 C 0 1 Y N N N N N 16.622 5.538  -25.136 -1.461 3.134  -2.076 C17  9M5 13 
9M5 C19  C14 C 0 1 Y N N N N N 18.297 4.257  -25.968 -0.822 1.622  -0.460 C19  9M5 14 
9M5 C20  C15 C 0 1 Y N N N N N 22.184 6.918  -27.024 -1.703 -0.852 0.007  C20  9M5 15 
9M5 C21  C16 C 0 1 Y N N N N N 21.450 7.900  -27.707 -2.665 -0.777 -0.992 C21  9M5 16 
9M5 C22  C17 C 0 1 Y N N N N N 22.069 8.734  -28.619 -3.936 -0.327 -0.693 C22  9M5 17 
9M5 C23  C18 C 0 1 Y N N N N N 23.424 8.634  -28.894 -4.252 0.049  0.600  C23  9M5 18 
9M5 C24  C19 C 0 1 N N N N N N 24.131 9.579  -29.864 -5.639 0.539  0.922  C24  9M5 19 
9M5 C25  C20 C 0 1 N N N N N N 23.135 10.544 -30.509 -5.724 0.887  2.410  C25  9M5 20 
9M5 C26  C21 C 0 1 N N N N N N 24.868 8.796  -30.951 -5.946 1.785  0.089  C26  9M5 21 
9M5 C27  C22 C 0 1 N N N N N N 25.159 10.397 -29.083 -6.656 -0.556 0.596  C27  9M5 22 
9M5 C28  C23 C 0 1 Y N N N N N 24.142 7.659  -28.225 -3.297 -0.026 1.597  C28  9M5 23 
9M5 C29  C24 C 0 1 Y N N N N N 23.552 6.823  -27.302 -2.025 -0.480 1.306  C29  9M5 24 
9M5 C30  C25 C 0 1 Y N N N N N 22.764 7.212  -24.269 1.332  -3.014 -0.198 C30  9M5 25 
9M5 C31  C26 C 0 1 Y N N N N N 23.592 7.216  -23.185 1.868  -4.208 0.188  C31  9M5 26 
9M5 C33  C27 C 0 1 Y N N N N N 23.658 9.168  -24.150 3.389  -3.034 -0.871 C33  9M5 27 
9M5 N03  N1  N 0 1 N N N N N N 21.577 6.044  -26.061 -0.415 -1.308 -0.292 N03  9M5 28 
9M5 N06  N2  N 0 1 N N N N N N 21.591 3.881  -28.368 2.661  0.724  -0.445 N06  9M5 29 
9M5 N18  N3  N 0 1 Y N N N N N 17.033 4.366  -25.552 -1.435 2.732  -0.821 N18  9M5 30 
9M5 N32  N4  N 0 1 Y N N N N N 24.158 8.457  -23.136 3.159  -4.214 -0.237 N32  9M5 31 
9M5 N34  N5  N 0 1 Y N N N N N 22.810 8.467  -24.865 2.300  -2.322 -0.852 N34  9M5 32 
9M5 O01  O1  O 0 1 N N N N N N 21.513 5.299  -23.943 -0.858 -3.318 0.545  O01  9M5 33 
9M5 O13  O2  O 0 1 N N N N N N 19.786 5.175  -28.791 1.673  -0.533 1.092  O13  9M5 34 
9M5 H041 H1  H 0 0 N N N N N N 20.893 4.102  -26.026 0.934  -0.928 -1.852 H041 9M5 35 
9M5 H071 H2  H 0 0 N N N N N N 23.381 4.744  -28.981 3.975  0.198  1.103  H071 9M5 36 
9M5 H081 H3  H 0 0 N N N N N N 22.752 1.948  -29.146 5.293  0.570  -0.965 H081 9M5 37 
9M5 H082 H4  H 0 0 N N N N N N 24.330 2.792  -29.299 4.788  2.276  -0.979 H082 9M5 38 
9M5 H092 H5  H 0 0 N N N N N N 22.307 2.216  -31.510 6.366  0.906  1.245  H092 9M5 39 
9M5 H091 H6  H 0 0 N N N N N N 23.945 1.506  -31.310 7.038  2.023  0.032  H091 9M5 40 
9M5 H102 H7  H 0 0 N N N N N N 23.851 3.286  -33.039 6.561  3.203  2.160  H102 9M5 41 
9M5 H101 H8  H 0 0 N N N N N N 24.977 3.664  -31.691 5.529  3.814  0.845  H101 9M5 42 
9M5 H112 H9  H 0 0 N N N N N N 23.912 5.591  -31.384 4.716  1.735  2.927  H112 9M5 43 
9M5 H111 H10 H 0 0 N N N N N N 22.725 5.166  -32.663 4.211  3.442  2.912  H111 9M5 44 
9M5 H122 H11 H 0 0 N N N N N N 21.699 5.700  -30.424 3.137  3.105  0.703  H122 9M5 45 
9M5 H121 H12 H 0 0 N N N N N N 21.282 4.073  -31.062 2.466  1.989  1.916  H121 9M5 46 
9M5 H151 H13 H 0 0 N N N N N N 19.318 7.392  -25.600 0.326  0.638  -3.476 H151 9M5 47 
9M5 H161 H14 H 0 0 N N N N N N 16.980 7.593  -24.864 -0.857 2.736  -4.093 H161 9M5 48 
9M5 H171 H15 H 0 0 N N N N N N 15.618 5.620  -24.747 -1.977 4.047  -2.334 H171 9M5 49 
9M5 H191 H16 H 0 0 N N N N N N 18.648 3.285  -26.281 -0.827 1.322  0.577  H191 9M5 50 
9M5 H211 H17 H 0 0 N N N N N N 20.392 8.005  -27.518 -2.419 -1.070 -2.003 H211 9M5 51 
9M5 H221 H18 H 0 0 N N N N N N 21.482 9.483  -29.130 -4.684 -0.269 -1.470 H221 9M5 52 
9M5 H252 H19 H 0 0 N N N N N N 22.607 11.105 -29.724 -5.506 -0.000 3.003  H252 9M5 53 
9M5 H253 H20 H 0 0 N N N N N N 23.675 11.246 -31.162 -5.000 1.668  2.642  H253 9M5 54 
9M5 H251 H21 H 0 0 N N N N N N 22.407 9.975  -31.106 -6.728 1.243  2.643  H251 9M5 55 
9M5 H261 H22 H 0 0 N N N N N N 25.583 8.103  -30.484 -6.950 2.140  0.322  H261 9M5 56 
9M5 H262 H23 H 0 0 N N N N N N 24.142 8.225  -31.548 -5.222 2.566  0.321  H262 9M5 57 
9M5 H263 H24 H 0 0 N N N N N N 25.409 9.496  -31.604 -5.886 1.537  -0.971 H263 9M5 58 
9M5 H273 H25 H 0 0 N N N N N N 24.650 10.970 -28.294 -6.438 -1.443 1.189  H273 9M5 59 
9M5 H271 H26 H 0 0 N N N N N N 25.896 9.720  -28.627 -7.660 -0.201 0.829  H271 9M5 60 
9M5 H272 H27 H 0 0 N N N N N N 25.671 11.090 -29.766 -6.596 -0.804 -0.464 H272 9M5 61 
9M5 H281 H28 H 0 0 N N N N N N 25.196 7.550  -28.432 -3.546 0.269  2.606  H281 9M5 62 
9M5 H291 H29 H 0 0 N N N N N N 24.152 6.087  -26.788 -1.280 -0.538 2.085  H291 9M5 63 
9M5 H311 H30 H 0 0 N N N N N N 23.765 6.399  -22.501 1.364  -4.996 0.727  H311 9M5 64 
9M5 H331 H31 H 0 0 N N N N N N 23.920 10.195 -24.356 4.325  -2.737 -1.321 H331 9M5 65 
9M5 H061 H32 H 0 0 N N N N N N 21.593 3.008  -27.881 2.654  1.084  -1.346 H061 9M5 66 
9M5 H1   H33 H 0 1 N N N N N N 24.826 8.776  -22.463 3.800  -4.931 -0.112 H1   9M5 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9M5 C10 C11  SING N N 1  
9M5 C10 C09  SING N N 2  
9M5 C11 C12  SING N N 3  
9M5 C09 C08  SING N N 4  
9M5 C26 C24  SING N N 5  
9M5 C12 C07  SING N N 6  
9M5 C25 C24  SING N N 7  
9M5 C24 C27  SING N N 8  
9M5 C24 C23  SING N N 9  
9M5 C08 C07  SING N N 10 
9M5 C07 N06  SING N N 11 
9M5 C23 C22  DOUB Y N 12 
9M5 C23 C28  SING Y N 13 
9M5 O13 C05  DOUB N N 14 
9M5 C22 C21  SING Y N 15 
9M5 N06 C05  SING N N 16 
9M5 C28 C29  DOUB Y N 17 
9M5 C05 C04  SING N N 18 
9M5 C21 C20  DOUB Y N 19 
9M5 C29 C20  SING Y N 20 
9M5 C20 N03  SING N N 21 
9M5 C04 N03  SING N N 22 
9M5 C04 C14  SING N N 23 
9M5 N03 C02  SING N N 24 
9M5 C14 C19  DOUB Y N 25 
9M5 C14 C15  SING Y N 26 
9M5 C19 N18  SING Y N 27 
9M5 C15 C16  DOUB Y N 28 
9M5 N18 C17  DOUB Y N 29 
9M5 C16 C17  SING Y N 30 
9M5 N34 C30  SING Y N 31 
9M5 N34 C33  DOUB Y N 32 
9M5 C02 C30  SING N N 33 
9M5 C02 O01  DOUB N N 34 
9M5 C30 C31  DOUB Y N 35 
9M5 C33 N32  SING Y N 36 
9M5 C31 N32  SING Y N 37 
9M5 C04 H041 SING N N 38 
9M5 C07 H071 SING N N 39 
9M5 C08 H081 SING N N 40 
9M5 C08 H082 SING N N 41 
9M5 C09 H092 SING N N 42 
9M5 C09 H091 SING N N 43 
9M5 C10 H102 SING N N 44 
9M5 C10 H101 SING N N 45 
9M5 C11 H112 SING N N 46 
9M5 C11 H111 SING N N 47 
9M5 C12 H122 SING N N 48 
9M5 C12 H121 SING N N 49 
9M5 C15 H151 SING N N 50 
9M5 C16 H161 SING N N 51 
9M5 C17 H171 SING N N 52 
9M5 C19 H191 SING N N 53 
9M5 C21 H211 SING N N 54 
9M5 C22 H221 SING N N 55 
9M5 C25 H252 SING N N 56 
9M5 C25 H253 SING N N 57 
9M5 C25 H251 SING N N 58 
9M5 C26 H261 SING N N 59 
9M5 C26 H262 SING N N 60 
9M5 C26 H263 SING N N 61 
9M5 C27 H273 SING N N 62 
9M5 C27 H271 SING N N 63 
9M5 C27 H272 SING N N 64 
9M5 C28 H281 SING N N 65 
9M5 C29 H291 SING N N 66 
9M5 C31 H311 SING N N 67 
9M5 C33 H331 SING N N 68 
9M5 N06 H061 SING N N 69 
9M5 N32 H1   SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9M5 InChI            InChI                1.06  "InChI=1S/C27H33N5O2/c1-27(2,3)20-11-13-22(14-12-20)32(26(34)23-17-29-18-30-23)24(19-8-7-15-28-16-19)25(33)31-21-9-5-4-6-10-21/h7-8,11-18,21,24H,4-6,9-10H2,1-3H3,(H,29,30)(H,31,33)/t24-/m0/s1" 
9M5 InChIKey         InChI                1.06  MUNFBYOTGGMQOS-DEOSSOPVSA-N                                                                                                                                                                      
9M5 SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)c1ccc(cc1)N([C@H](C(=O)NC2CCCCC2)c3cccnc3)C(=O)c4c[nH]cn4"                                                                                                                              
9M5 SMILES           CACTVS               3.385 "CC(C)(C)c1ccc(cc1)N([CH](C(=O)NC2CCCCC2)c3cccnc3)C(=O)c4c[nH]cn4"                                                                                                                               
9M5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1ccc(cc1)N([C@@H](c2cccnc2)C(=O)NC3CCCCC3)C(=O)c4c[nH]cn4"                                                                                                                             
9M5 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C)c1ccc(cc1)N(C(c2cccnc2)C(=O)NC3CCCCC3)C(=O)c4c[nH]cn4"                                                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           9M5 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-(4-~{tert}-butylphenyl)-~{N}-[(1~{S})-2-(cyclohexylamino)-2-oxidanylidene-1-pyridin-3-yl-ethyl]-1~{H}-imidazole-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9M5 "Create component"  2021-11-19 PDBE 
9M5 "Modify descriptor" 2022-08-22 RCSB 
9M5 "Initial release"   2024-05-01 RCSB 
# 
