data_8O5
# 
_chem_comp.id                                    8O5 
_chem_comp.name                                  "(2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[[(~{E})-3-phenylprop-2-enoyl]amino]propanoyl]amino]-2-oxidanyl-4-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-~{N}-(phenylmethyl)butanamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H36 N4 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-02-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        532.631 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8O5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5N5O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8O5 C10 C1  C 0 1 Y N N N N N -27.610 6.894  3.892  9.004  -0.383 -1.682 C10 8O5 1  
8O5 O01 O1  O 0 1 N N N N N N -22.998 2.035  3.770  3.618  -0.783 1.819  O01 8O5 2  
8O5 C02 C2  C 0 1 N N N N N N -24.192 2.110  4.116  3.429  0.016  0.920  C02 8O5 3  
8O5 C03 C3  C 0 1 N N N N N N -25.025 3.326  4.073  4.498  0.306  -0.038 C03 8O5 4  
8O5 C05 C4  C 0 1 N N N N N N -24.646 4.467  3.523  5.690  -0.313 0.074  C05 8O5 5  
8O5 C07 C5  C 0 1 Y N N N N N -25.523 5.683  3.500  6.765  -0.022 -0.889 C07 8O5 6  
8O5 C16 C6  C 0 1 Y N N N N N -24.923 6.883  3.063  6.552  0.896  -1.923 C16 8O5 7  
8O5 C14 C7  C 0 1 Y N N N N N -25.659 8.071  3.029  7.559  1.155  -2.828 C14 8O5 8  
8O5 C12 C8  C 0 1 Y N N N N N -26.998 8.077  3.445  8.784  0.522  -2.705 C12 8O5 9  
8O5 C08 C9  C 0 1 Y N N N N N -26.878 5.700  3.927  8.003  -0.661 -0.775 C08 8O5 10 
8O5 N18 N1  N 0 1 N N N N N N -24.866 1.021  4.476  2.237  0.634  0.807  N18 8O5 11 
8O5 C20 C10 C 0 1 N N S N N N -24.185 -0.242 4.504  1.134  0.266  1.698  C20 8O5 12 
8O5 C22 C11 C 0 1 N N N N N N -25.132 -1.275 5.068  0.612  1.517  2.408  C22 8O5 13 
8O5 C25 C12 C 0 1 N N N N N N -25.639 -0.815 6.424  1.718  2.102  3.289  C25 8O5 14 
8O5 C26 C13 C 0 1 N N N N N N -26.024 -1.871 7.435  1.425  3.419  4.009  C26 8O5 15 
8O5 C34 C14 C 0 1 N N N N N N -24.739 -1.050 7.646  1.486  2.111  4.801  C34 8O5 16 
8O5 C36 C15 C 0 1 N N N N N N -23.619 -0.659 3.166  0.022  -0.354 0.891  C36 8O5 17 
8O5 O37 O2  O 0 1 N N N N N N -24.251 -0.436 2.153  0.140  -0.476 -0.310 O37 8O5 18 
8O5 N38 N2  N 0 1 N N N N N N -22.433 -1.285 3.160  -1.103 -0.772 1.503  N38 8O5 19 
8O5 C40 C16 C 0 1 N N S N N N -21.830 -1.875 1.998  -2.137 -1.473 0.737  C40 8O5 20 
8O5 C42 C17 C 0 1 N N N N N N -20.484 -1.218 1.655  -1.849 -2.976 0.748  C42 8O5 21 
8O5 C45 C18 C 0 1 N N S N N N -20.625 0.256  1.351  -2.872 -3.697 -0.131 C45 8O5 22 
8O5 C47 C19 C 0 1 N N N N N N -19.280 0.939  1.147  -2.723 -3.273 -1.575 C47 8O5 23 
8O5 O48 O3  O 0 1 N N N N N N -18.401 0.935  1.981  -3.127 -2.227 -2.037 O48 8O5 24 
8O5 N49 N3  N 0 1 N N N N N N -19.275 1.703  0.046  -2.076 -4.223 -2.272 N49 8O5 25 
8O5 C51 C20 C 0 1 N N N N N N -20.596 1.795  -0.566 -1.714 -5.359 -1.416 C51 8O5 26 
8O5 C54 C21 C 0 1 N N N N N N -21.332 0.572  0.019  -2.593 -5.218 -0.149 C54 8O5 27 
8O5 C57 C22 C 0 1 N N R N N N -21.752 -3.345 2.386  -3.505 -1.212 1.370  C57 8O5 28 
8O5 O58 O4  O 0 1 N N N N N N -23.009 -3.830 2.902  -3.506 -1.687 2.717  O58 8O5 29 
8O5 C66 C23 C 0 1 N N N N N N -21.590 -4.165 1.136  -3.789 0.269  1.359  C66 8O5 30 
8O5 O67 O5  O 0 1 N N N N N N -20.660 -3.990 0.386  -3.883 0.875  2.405  O67 8O5 31 
8O5 N68 N4  N 0 1 N N N N N N -22.577 -5.019 0.862  -3.937 0.918  0.187  N68 8O5 32 
8O5 C70 C24 C 0 1 N N N N N N -22.661 -5.793 -0.366 -4.213 2.357  0.177  C70 8O5 33 
8O5 C73 C25 C 0 1 Y N N N N N -23.313 -5.043 -1.504 -4.333 2.835  -1.247 C73 8O5 34 
8O5 C74 C26 C 0 1 Y N N N N N -23.858 -3.764 -1.352 -5.564 2.829  -1.876 C74 8O5 35 
8O5 C76 C27 C 0 1 Y N N N N N -23.350 -5.667 -2.760 -3.214 3.284  -1.922 C76 8O5 36 
8O5 C78 C28 C 0 1 Y N N N N N -23.940 -5.017 -3.854 -3.326 3.729  -3.227 C78 8O5 37 
8O5 C80 C29 C 0 1 Y N N N N N -24.505 -3.747 -3.686 -4.557 3.723  -3.855 C80 8O5 38 
8O5 C82 C30 C 0 1 Y N N N N N -24.459 -3.123 -2.424 -5.675 3.267  -3.182 C82 8O5 39 
8O5 H1  H1  H 0 1 N N N N N N -28.643 6.905  4.208  9.961  -0.876 -1.595 H1  8O5 40 
8O5 H2  H2  H 0 1 N N N N N N -26.007 3.282  4.519  4.330  1.014  -0.836 H2  8O5 41 
8O5 H3  H3  H 0 1 N N N N N N -23.666 4.525  3.073  5.858  -1.022 0.872  H3  8O5 42 
8O5 H4  H4  H 0 1 N N N N N N -23.889 6.884  2.753  5.598  1.393  -2.017 H4  8O5 43 
8O5 H5  H5  H 0 1 N N N N N N -25.197 8.983  2.683  7.397  1.863  -3.627 H5  8O5 44 
8O5 H6  H6  H 0 1 N N N N N N -27.563 8.997  3.422  9.572  0.736  -3.412 H6  8O5 45 
8O5 H7  H7  H 0 1 N N N N N N -27.344 4.792  4.279  8.175  -1.371 0.020  H7  8O5 46 
8O5 H8  H8  H 0 1 N N N N N N -25.833 1.082  4.723  2.110  1.323  0.136  H8  8O5 47 
8O5 H9  H9  H 0 1 N N N N N N -23.340 -0.160 5.203  1.488  -0.451 2.438  H9  8O5 48 
8O5 H10 H10 H 0 1 N N N N N N -25.983 -1.404 4.383  0.309  2.256  1.666  H10 8O5 49 
8O5 H11 H11 H 0 1 N N N N N N -24.604 -2.233 5.181  -0.244 1.252  3.028  H11 8O5 50 
8O5 H12 H12 H 0 1 N N N N N N -26.232 0.111  6.434  2.736  1.937  2.936  H12 8O5 51 
8O5 H13 H13 H 0 1 N N N N N N -26.891 -1.711 8.092  2.250  4.121  4.132  H13 8O5 52 
8O5 H14 H14 H 0 1 N N N N N N -25.957 -2.936 7.169  0.444  3.869  3.856  H14 8O5 53 
8O5 H15 H15 H 0 1 N N N N N N -23.754 -1.524 7.524  0.545  1.701  5.168  H15 8O5 54 
8O5 H16 H16 H 0 1 N N N N N N -24.688 -0.299 8.448  2.352  1.952  5.444  H16 8O5 55 
8O5 H17 H17 H 0 1 N N N N N N -21.934 -1.345 4.025  -1.228 -0.610 2.451  H17 8O5 56 
8O5 H18 H18 H 0 1 N N N N N N -22.502 -1.772 1.133  -2.136 -1.110 -0.290 H18 8O5 57 
8O5 H19 H19 H 0 1 N N N N N N -20.059 -1.722 0.774  -0.846 -3.157 0.361  H19 8O5 58 
8O5 H20 H20 H 0 1 N N N N N N -19.803 -1.339 2.511  -1.918 -3.352 1.769  H20 8O5 59 
8O5 H21 H21 H 0 1 N N N N N N -21.165 0.751  2.172  -3.884 -3.499 0.222  H21 8O5 60 
8O5 H22 H22 H 0 1 N N N N N N -18.460 2.157  -0.314 -1.875 -4.166 -3.219 H22 8O5 61 
8O5 H23 H23 H 0 1 N N N N N N -20.530 1.730  -1.662 -1.932 -6.298 -1.924 H23 8O5 62 
8O5 H24 H24 H 0 1 N N N N N N -21.099 2.732  -0.284 -0.658 -5.309 -1.150 H24 8O5 63 
8O5 H25 H25 H 0 1 N N N N N N -22.391 0.810  0.194  -2.046 -5.526 0.742  H25 8O5 64 
8O5 H26 H26 H 0 1 N N N N N N -21.257 -0.285 -0.667 -3.519 -5.785 -0.252 H26 8O5 65 
8O5 H27 H27 H 0 1 N N N N N N -20.922 -3.522 3.086  -4.274 -1.733 0.800  H27 8O5 66 
8O5 H28 H28 H 0 1 N N N N N N -23.218 -3.373 3.708  -2.845 -1.266 3.283  H28 8O5 67 
8O5 H29 H29 H 0 1 N N N N N N -23.302 -5.134 1.541  -3.861 0.433  -0.649 H29 8O5 68 
8O5 H30 H30 H 0 1 N N N N N N -23.247 -6.702 -0.166 -5.145 2.552  0.706  H30 8O5 69 
8O5 H31 H31 H 0 1 N N N N N N -21.642 -6.074 -0.672 -3.397 2.886  0.670  H31 8O5 70 
8O5 H32 H32 H 0 1 N N N N N N -23.810 -3.272 -0.392 -6.439 2.482  -1.347 H32 8O5 71 
8O5 H33 H33 H 0 1 N N N N N N -22.923 -6.651 -2.885 -2.252 3.289  -1.431 H33 8O5 72 
8O5 H34 H34 H 0 1 N N N N N N -23.958 -5.494 -4.823 -2.452 4.085  -3.752 H34 8O5 73 
8O5 H35 H35 H 0 1 N N N N N N -24.974 -3.248 -4.521 -4.644 4.070  -4.874 H35 8O5 74 
8O5 H36 H36 H 0 1 N N N N N N -24.893 -2.143 -2.291 -6.636 3.263  -3.674 H36 8O5 75 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8O5 C78 C80 DOUB Y N 1  
8O5 C78 C76 SING Y N 2  
8O5 C80 C82 SING Y N 3  
8O5 C76 C73 DOUB Y N 4  
8O5 C82 C74 DOUB Y N 5  
8O5 C73 C74 SING Y N 6  
8O5 C73 C70 SING N N 7  
8O5 C51 C54 SING N N 8  
8O5 C51 N49 SING N N 9  
8O5 C70 N68 SING N N 10 
8O5 C54 C45 SING N N 11 
8O5 N49 C47 SING N N 12 
8O5 O67 C66 DOUB N N 13 
8O5 N68 C66 SING N N 14 
8O5 C66 C57 SING N N 15 
8O5 C47 C45 SING N N 16 
8O5 C47 O48 DOUB N N 17 
8O5 C45 C42 SING N N 18 
8O5 C42 C40 SING N N 19 
8O5 C40 C57 SING N N 20 
8O5 C40 N38 SING N N 21 
8O5 O37 C36 DOUB N N 22 
8O5 C57 O58 SING N N 23 
8O5 C14 C16 DOUB Y N 24 
8O5 C14 C12 SING Y N 25 
8O5 C16 C07 SING Y N 26 
8O5 N38 C36 SING N N 27 
8O5 C36 C20 SING N N 28 
8O5 C12 C10 DOUB Y N 29 
8O5 C07 C05 SING N N 30 
8O5 C07 C08 DOUB Y N 31 
8O5 C05 C03 DOUB N E 32 
8O5 O01 C02 DOUB N N 33 
8O5 C10 C08 SING Y N 34 
8O5 C03 C02 SING N N 35 
8O5 C02 N18 SING N N 36 
8O5 N18 C20 SING N N 37 
8O5 C20 C22 SING N N 38 
8O5 C22 C25 SING N N 39 
8O5 C25 C26 SING N N 40 
8O5 C25 C34 SING N N 41 
8O5 C26 C34 SING N N 42 
8O5 C10 H1  SING N N 43 
8O5 C03 H2  SING N N 44 
8O5 C05 H3  SING N N 45 
8O5 C16 H4  SING N N 46 
8O5 C14 H5  SING N N 47 
8O5 C12 H6  SING N N 48 
8O5 C08 H7  SING N N 49 
8O5 N18 H8  SING N N 50 
8O5 C20 H9  SING N N 51 
8O5 C22 H10 SING N N 52 
8O5 C22 H11 SING N N 53 
8O5 C25 H12 SING N N 54 
8O5 C26 H13 SING N N 55 
8O5 C26 H14 SING N N 56 
8O5 C34 H15 SING N N 57 
8O5 C34 H16 SING N N 58 
8O5 N38 H17 SING N N 59 
8O5 C40 H18 SING N N 60 
8O5 C42 H19 SING N N 61 
8O5 C42 H20 SING N N 62 
8O5 C45 H21 SING N N 63 
8O5 N49 H22 SING N N 64 
8O5 C51 H23 SING N N 65 
8O5 C51 H24 SING N N 66 
8O5 C54 H25 SING N N 67 
8O5 C54 H26 SING N N 68 
8O5 C57 H27 SING N N 69 
8O5 O58 H28 SING N N 70 
8O5 N68 H29 SING N N 71 
8O5 C70 H30 SING N N 72 
8O5 C70 H31 SING N N 73 
8O5 C74 H32 SING N N 74 
8O5 C76 H33 SING N N 75 
8O5 C78 H34 SING N N 76 
8O5 C80 H35 SING N N 77 
8O5 C82 H36 SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8O5 InChI            InChI                1.03  "InChI=1S/C30H36N4O5/c35-26(14-13-20-7-3-1-4-8-20)33-25(17-21-11-12-21)29(38)34-24(18-23-15-16-31-28(23)37)27(36)30(39)32-19-22-9-5-2-6-10-22/h1-10,13-14,21,23-25,27,36H,11-12,15-19H2,(H,31,37)(H,32,39)(H,33,35)(H,34,38)/b14-13+/t23-,24-,25-,27+/m0/s1" 
8O5 InChIKey         InChI                1.03  VXPGYVPTHDUTNQ-BXCMFHCISA-N                                                                                                                                                                                                                                  
8O5 SMILES_CANONICAL CACTVS               3.385 "O[C@H]([C@H](C[C@@H]1CCNC1=O)NC(=O)[C@H](CC2CC2)NC(=O)/C=C/c3ccccc3)C(=O)NCc4ccccc4"                                                                                                                                                                        
8O5 SMILES           CACTVS               3.385 "O[CH]([CH](C[CH]1CCNC1=O)NC(=O)[CH](CC2CC2)NC(=O)C=Cc3ccccc3)C(=O)NCc4ccccc4"                                                                                                                                                                               
8O5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)CNC(=O)[C@@H]([C@H](C[C@@H]2CCNC2=O)NC(=O)[C@H](CC3CC3)NC(=O)/C=C/c4ccccc4)O"                                                                                                                                                                     
8O5 SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)CNC(=O)C(C(CC2CCNC2=O)NC(=O)C(CC3CC3)NC(=O)C=Cc4ccccc4)O"                                                                                                                                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           8O5 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "(2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[[(~{E})-3-phenylprop-2-enoyl]amino]propanoyl]amino]-2-oxidanyl-4-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-~{N}-(phenylmethyl)butanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8O5 "Create component" 2017-02-14 EBI  
8O5 "Initial release"  2018-03-07 RCSB 
8O5 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            8O5 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C57 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
